| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fecR [H]
Identifier: 77461409
GI number: 77461409
Start: 5835412
End: 5836383
Strand: Direct
Name: fecR [H]
Synonym: Pfl01_5188
Alternate gene names: 77461409
Gene position: 5835412-5836383 (Clockwise)
Preceding gene: 77461408
Following gene: 77461410
Centisome position: 90.63
GC content: 65.53
Gene sequence:
>972_bases ATGAGCCCGGCCAGTTCTAGACCGGTCCCGGCCCATGTGCTGGACGCGGCGATTGCCTGGCAATTGACCCTCGATTCCAG CACGCCGCTGGAGCGCGAAGAGTTTGCCAAATGGCACGCGGCCAACGAAGAACACGCTCGCGCCTGGCGTCAGCTGGGCA TGCTCGACCAGCGTTTCAGCGTGGCCAAGGGCCCGGCACGCAGCGCGTTGCTGCAATCGCGCGAAGGCATCCGCCGTCGG GTACGCAAACTGGGCAGCGGGCTGGCCAGTGTCGTGGCGGTGGTCGGTCTGGCGTTGTTTGCCGGCGAACGTTATCTGCC GCTGGATTACTGGCTCGCCGATCAACGCACATCCACCGGCGAACAGCGCACCGTGCGCCTGGCCGACGGCACCGTACTCA ATCTGAATACCCACAGCGCCGTAGATGTCCGCTTCGATGACAAGCAACGCCTGATCGTGTTGCAGGAAGGCGAAATCCTC GTCGAAACCGGTCACGGCGATGCGCGGCCGTTCATTGTCGAAACCGCCGAGGGCAGCATGCGCGCCCTGGGCACGCGGTT TCTGGTCAAGCGCGAAGACGCCGGCACGCGCCTGAGCGTGTTGCAGTCGGCGGTGGCGGCGCATCCGCAATCCGATCCGC AGGAACAGATCCTGCGCGAAGGCCAGCAAGTGCTGATCCGCAATAACGGTCTGGATTCGGTGGTGGCGCTCACCCCCGGC GCCGATGCCTGGACCCGCGGCATGCTGGTGGTGGATAACGCACGCCTGGAAGACCTGGTGCATGAACTCGGCCGTTATCG TCGCGGCCATCTGGGCATCGCGCCGGAAGTCGCCGACCTGCGCATTACCGGCAGCTTCCCGCTGCACGACACCGACAAGG CGCTGAACGCCCTGCTGCCGACCCTGCCGGTGCAGATCGAACAGCACACGCCATGGTGGGTGACCGTGGCCAAGGCGGAT CCGAAGCCCTGA
Upstream 100 bases:
>100_bases CCGAAATCGCCGACAAACTCGGCGTGTCGGTCCCCCGCGTGCGTCAGTACCTGGCCCAGGGCATCCGCCAGTGCTACATC GCGCTGTACGGTGAGCCGAC
Downstream 100 bases:
>100_bases CATTCGCTGCTGCCTGCCCGCGACAGGCCACCTGCCCCCCTGAAAACGGACTTTCTGCTGACTTGCGCAGCGATGTCGTT CGTTAATCGAAATTATTTTC
Product: putative FecR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSPASSRPVPAHVLDAAIAWQLTLDSSTPLEREEFAKWHAANEEHARAWRQLGMLDQRFSVAKGPARSALLQSREGIRRR VRKLGSGLASVVAVVGLALFAGERYLPLDYWLADQRTSTGEQRTVRLADGTVLNLNTHSAVDVRFDDKQRLIVLQEGEIL VETGHGDARPFIVETAEGSMRALGTRFLVKREDAGTRLSVLQSAVAAHPQSDPQEQILREGQQVLIRNNGLDSVVALTPG ADAWTRGMLVVDNARLEDLVHELGRYRRGHLGIAPEVADLRITGSFPLHDTDKALNALLPTLPVQIEQHTPWWVTVAKAD PKP
Sequences:
>Translated_323_residues MSPASSRPVPAHVLDAAIAWQLTLDSSTPLEREEFAKWHAANEEHARAWRQLGMLDQRFSVAKGPARSALLQSREGIRRR VRKLGSGLASVVAVVGLALFAGERYLPLDYWLADQRTSTGEQRTVRLADGTVLNLNTHSAVDVRFDDKQRLIVLQEGEIL VETGHGDARPFIVETAEGSMRALGTRFLVKREDAGTRLSVLQSAVAAHPQSDPQEQILREGQQVLIRNNGLDSVVALTPG ADAWTRGMLVVDNARLEDLVHELGRYRRGHLGIAPEVADLRITGSFPLHDTDKALNALLPTLPVQIEQHTPWWVTVAKAD PKP >Mature_322_residues SPASSRPVPAHVLDAAIAWQLTLDSSTPLEREEFAKWHAANEEHARAWRQLGMLDQRFSVAKGPARSALLQSREGIRRRV RKLGSGLASVVAVVGLALFAGERYLPLDYWLADQRTSTGEQRTVRLADGTVLNLNTHSAVDVRFDDKQRLIVLQEGEILV ETGHGDARPFIVETAEGSMRALGTRFLVKREDAGTRLSVLQSAVAAHPQSDPQEQILREGQQVLIRNNGLDSVVALTPGA DAWTRGMLVVDNARLEDLVHELGRYRRGHLGIAPEVADLRITGSFPLHDTDKALNALLPTLPVQIEQHTPWWVTVAKADP KP
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=293, Percent_Identity=34.1296928327645, Blast_Score=146, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 35596; Mature: 35465
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPASSRPVPAHVLDAAIAWQLTLDSSTPLEREEFAKWHAANEEHARAWRQLGMLDQRFS CCCCCCCCCCHHHHHHEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHH VAKGPARSALLQSREGIRRRVRKLGSGLASVVAVVGLALFAGERYLPLDYWLADQRTSTG HCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCC EQRTVRLADGTVLNLNTHSAVDVRFDDKQRLIVLQEGEILVETGHGDARPFIVETAEGSM CCEEEEEECCEEEEECCCCEEEEEECCCCEEEEEECCCEEEECCCCCCCCEEEEECCCCH RALGTRFLVKREDAGTRLSVLQSAVAAHPQSDPQEQILREGQQVLIRNNGLDSVVALTPG HHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCEEEEECCC ADAWTRGMLVVDNARLEDLVHELGRYRRGHLGIAPEVADLRITGSFPLHDTDKALNALLP CCHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHC TLPVQIEQHTPWWVTVAKADPKP CCCEEEECCCCEEEEEECCCCCC >Mature Secondary Structure SPASSRPVPAHVLDAAIAWQLTLDSSTPLEREEFAKWHAANEEHARAWRQLGMLDQRFS CCCCCCCCCHHHHHHEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHH VAKGPARSALLQSREGIRRRVRKLGSGLASVVAVVGLALFAGERYLPLDYWLADQRTSTG HCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCC EQRTVRLADGTVLNLNTHSAVDVRFDDKQRLIVLQEGEILVETGHGDARPFIVETAEGSM CCEEEEEECCEEEEECCCCEEEEEECCCCEEEEEECCCEEEECCCCCCCCEEEEECCCCH RALGTRFLVKREDAGTRLSVLQSAVAAHPQSDPQEQILREGQQVLIRNNGLDSVVALTPG HHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCCEEEEECCC ADAWTRGMLVVDNARLEDLVHELGRYRRGHLGIAPEVADLRITGSFPLHDTDKALNALLP CCHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHC TLPVQIEQHTPWWVTVAKADPKP CCCEEEECCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]