| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is yhjA [C]
Identifier: 77461390
GI number: 77461390
Start: 5812964
End: 5815078
Strand: Reverse
Name: yhjA [C]
Synonym: Pfl01_5169
Alternate gene names: 77461390
Gene position: 5815078-5812964 (Counterclockwise)
Preceding gene: 77461391
Following gene: 77461389
Centisome position: 90.32
GC content: 62.93
Gene sequence:
>2115_bases ATGAACATCAGTCGACTCGCTCGTTTGACCTTCTGGTTACCCATCGCGCTGTCAGTCCACAGCGCATGGGCCGCCGACCC CGCCGTGGTCGATCCTCCCGTATCGGAGGTGCCTTCGCTGCAATCGTTGCGCGGGATGGTGCCCCCCGATCCGTCCGGAA CCGAAGGCGGACGCAAGGTCGACCTGATGACCGACTACGTGCTCAATCGCCAGGCCGCGATCCTGCTGGGCAAAGCGCTG TTCTGGGACATGGAGATCGGCAGCGACGGCTCCACGGCATGCGCTTCCTGCCACTACCACGCCGGCGTCGACCACCGCAT CACCAACCAGCTCAACCCCGGCCAGGCCCATACCAACGCCAACGTCGCGTCGATCTTCAACAAACCGTTCGTAGCCTCGG ACATTCCCGGTGACGTGGCGTCCTACGCGACGCTGTCCGGTGGCAAGGGCGGTCCGAACTACACGCTGAAGAAAACCGAC TTCCCGACCCACGTGCTGAGCAATCCGCTGGAGCGCAACTCGCCCATCGTGTACTCGACGGACGATGTGGTCGGCTCGCA AGGCGTGTTCGACGCCAACTTCGTCAAACCCAATCAGGCGCGTTTCGACAAATGTACTCAGCAGCCGGACGGTATTTTCC AGGTCGGTGGCATCAACGTGCGTCGCAGCACCGGGCGCAATGCGCCGTCGGTGATCAATGCCGCGTTCAACGTGCGCAAC TTCTGGGACGGTCGGGCCAACAACGTGTTCAACGGCTTCTCGCCGTTCGGTAATCGCGATCCGGATGCCGGGATCTACGT GACCAGCGAACGCAGCACGGTTGCGACCAAAGTGCGGCTGGCGCTCAACGATGCGTCTGCGGCCTCGCAAGCCGTCGGCC CGCCCGGCAGCCCGGTGGAAATGTCCTGCGGTGGCCGTACCTTTGCCGACATCGGCCGCAGGATGCTCGACACGCTGATG CTCAAGCAGCAAAGGATTTCATCCACCGACTCGGTGCTGGCTCCAGTATCGGGCGCACGGCGGCCGACCTATCGCGAACT GATCAAGAACGCCTTCCAGCCCCGGCTGTGGAACGCCACGCAAAACGTTCTGGTGGGCGGCGTGCCGTACACCCAGATGG AGGCCAACTTCCCGCTGTTTTTCGGCCTGGCGATCCAGATGTATGAGGCGACGCTGGTGTCCGATCAGGCGCCGATCGAT GCTTACCTGCAGGGCGATCACACGGCAATGAACGCGCAACAGGTGGAGGGCATGAACCTGTTTCTCGGCAAGGGCAAATG CGTCAATTGCCACGGCGGTCCGGAGCTGACCAACGCCGCCAGCCGCCTGCTGATGCATCCGCGCGAACGCATCGAGCGCA TGGTGATGGCCGACAACCTGACCACTCTTTACGACAACGGCTTCTACAACACCGGTGTGCGCCCGACCTCGGAAGACCTG GCCCTCGGCGGCGCGGATGCCTGGGGCAATCCATGGTCGTTCACCCGGCAGTACAACAGTGTGTTGCAGGGCGGCCGGTC GGTGGATCCGCTGGACGTCGATGTCTGCACGTTCGAGGCACCGTTGAGTGCGGCGATTCCGTGCGATGCCACGCTCAAAC CGAATGTCGGTTTCCGCGACTCGGTCGACGGCGCATTCAAGACCCCGACCCTGCGTAACATCGCCCTGACCGGGCCGTAC TTCCACAACGGCAGCCGCTCGACGCTCAAGCAGGTGATGGAGTTCTACAACCGTGGCGGTGACCGGCGCGGTGAAGATGC CAACAACACCAGCGGCTTTGAGCATCCGGCGGTGAACCAGCACAACACTTCCAACCTCGACCCGGACATGACGGCGCTGA ACCTGACGCCCGATGAAATCGACGCGCTGGTGAAATTCATGGAGGTCGGCCTGACCGATCCTCGCGTGGCATGGGAGCGC GCACCGTTCGATCATCCGTCGCTGGTGATTCCGCAGGGCCACATCGGCGATGAAAATGCCGTGACCCAGCGTCCGGCCAG TCCGAAAGTCACGACCCGTCAGGCGATGGACGCATCGCTCAATCTCAAGCCTTACGGTGCTGAAGGCCGGCCGGCGGCAG AGGGGCCATTGCAGCCGTTCTACAACGATCTCTGA
Upstream 100 bases:
>100_bases CCAATTAATTGCACTGCCCGATTTACCGGTGCTAACCAGAACTGCCTGCTCAAAGAAGCAAGACGCCCGGCACTTAACAA CAACAGTCAGGGTGAAGCCT
Downstream 100 bases:
>100_bases GCATAAAAACACACCATGGCCATCAAGAATGATGGCCATGGTGGCCGTCTAGCGGCCATTGCGCAAAAAACCTTACTGAA TTACTCAGCAACTGCCGATT
Product: hypothetical protein
Products: 2 Ferricytochrome C; 2 H2O. [C]
Alternate protein names: Cytochrome C Peroxidase; Methylamine Utilization Protein/Cytochrome C Peroxidase; Di-Heme Cytochrome-C Peroxidase; Di-Haem Cytochrome C; Cytochrome-C Peroxidase
Number of amino acids: Translated: 704; Mature: 704
Protein sequence:
>704_residues MNISRLARLTFWLPIALSVHSAWAADPAVVDPPVSEVPSLQSLRGMVPPDPSGTEGGRKVDLMTDYVLNRQAAILLGKAL FWDMEIGSDGSTACASCHYHAGVDHRITNQLNPGQAHTNANVASIFNKPFVASDIPGDVASYATLSGGKGGPNYTLKKTD FPTHVLSNPLERNSPIVYSTDDVVGSQGVFDANFVKPNQARFDKCTQQPDGIFQVGGINVRRSTGRNAPSVINAAFNVRN FWDGRANNVFNGFSPFGNRDPDAGIYVTSERSTVATKVRLALNDASAASQAVGPPGSPVEMSCGGRTFADIGRRMLDTLM LKQQRISSTDSVLAPVSGARRPTYRELIKNAFQPRLWNATQNVLVGGVPYTQMEANFPLFFGLAIQMYEATLVSDQAPID AYLQGDHTAMNAQQVEGMNLFLGKGKCVNCHGGPELTNAASRLLMHPRERIERMVMADNLTTLYDNGFYNTGVRPTSEDL ALGGADAWGNPWSFTRQYNSVLQGGRSVDPLDVDVCTFEAPLSAAIPCDATLKPNVGFRDSVDGAFKTPTLRNIALTGPY FHNGSRSTLKQVMEFYNRGGDRRGEDANNTSGFEHPAVNQHNTSNLDPDMTALNLTPDEIDALVKFMEVGLTDPRVAWER APFDHPSLVIPQGHIGDENAVTQRPASPKVTTRQAMDASLNLKPYGAEGRPAAEGPLQPFYNDL
Sequences:
>Translated_704_residues MNISRLARLTFWLPIALSVHSAWAADPAVVDPPVSEVPSLQSLRGMVPPDPSGTEGGRKVDLMTDYVLNRQAAILLGKAL FWDMEIGSDGSTACASCHYHAGVDHRITNQLNPGQAHTNANVASIFNKPFVASDIPGDVASYATLSGGKGGPNYTLKKTD FPTHVLSNPLERNSPIVYSTDDVVGSQGVFDANFVKPNQARFDKCTQQPDGIFQVGGINVRRSTGRNAPSVINAAFNVRN FWDGRANNVFNGFSPFGNRDPDAGIYVTSERSTVATKVRLALNDASAASQAVGPPGSPVEMSCGGRTFADIGRRMLDTLM LKQQRISSTDSVLAPVSGARRPTYRELIKNAFQPRLWNATQNVLVGGVPYTQMEANFPLFFGLAIQMYEATLVSDQAPID AYLQGDHTAMNAQQVEGMNLFLGKGKCVNCHGGPELTNAASRLLMHPRERIERMVMADNLTTLYDNGFYNTGVRPTSEDL ALGGADAWGNPWSFTRQYNSVLQGGRSVDPLDVDVCTFEAPLSAAIPCDATLKPNVGFRDSVDGAFKTPTLRNIALTGPY FHNGSRSTLKQVMEFYNRGGDRRGEDANNTSGFEHPAVNQHNTSNLDPDMTALNLTPDEIDALVKFMEVGLTDPRVAWER APFDHPSLVIPQGHIGDENAVTQRPASPKVTTRQAMDASLNLKPYGAEGRPAAEGPLQPFYNDL >Mature_704_residues MNISRLARLTFWLPIALSVHSAWAADPAVVDPPVSEVPSLQSLRGMVPPDPSGTEGGRKVDLMTDYVLNRQAAILLGKAL FWDMEIGSDGSTACASCHYHAGVDHRITNQLNPGQAHTNANVASIFNKPFVASDIPGDVASYATLSGGKGGPNYTLKKTD FPTHVLSNPLERNSPIVYSTDDVVGSQGVFDANFVKPNQARFDKCTQQPDGIFQVGGINVRRSTGRNAPSVINAAFNVRN FWDGRANNVFNGFSPFGNRDPDAGIYVTSERSTVATKVRLALNDASAASQAVGPPGSPVEMSCGGRTFADIGRRMLDTLM LKQQRISSTDSVLAPVSGARRPTYRELIKNAFQPRLWNATQNVLVGGVPYTQMEANFPLFFGLAIQMYEATLVSDQAPID AYLQGDHTAMNAQQVEGMNLFLGKGKCVNCHGGPELTNAASRLLMHPRERIERMVMADNLTTLYDNGFYNTGVRPTSEDL ALGGADAWGNPWSFTRQYNSVLQGGRSVDPLDVDVCTFEAPLSAAIPCDATLKPNVGFRDSVDGAFKTPTLRNIALTGPY FHNGSRSTLKQVMEFYNRGGDRRGEDANNTSGFEHPAVNQHNTSNLDPDMTALNLTPDEIDALVKFMEVGLTDPRVAWER APFDHPSLVIPQGHIGDENAVTQRPASPKVTTRQAMDASLNLKPYGAEGRPAAEGPLQPFYNDL
Specific function: Unknown
COG id: COG1858
COG function: function code P; Cytochrome c peroxidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.11.1.5 [C]
Molecular weight: Translated: 76261; Mature: 76261
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISRLARLTFWLPIALSVHSAWAADPAVVDPPVSEVPSLQSLRGMVPPDPSGTEGGRKV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCEEE DLMTDYVLNRQAAILLGKALFWDMEIGSDGSTACASCHYHAGVDHRITNQLNPGQAHTNA EEHHHHHHCCCHHHEEHHHHEEEEEECCCCCCHHHCCEECCCCCHHHHCCCCCCCCCCCC NVASIFNKPFVASDIPGDVASYATLSGGKGGPNYTLKKTDFPTHVLSNPLERNSPIVYST CHHHHHCCCCCCCCCCCHHHHHHEECCCCCCCCCEEECCCCCHHHHCCCHHCCCCEEEEC DDVVGSQGVFDANFVKPNQARFDKCTQQPDGIFQVGGINVRRSTGRNAPSVINAAFNVRN CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCEEEECCCCCCCCHHHHHHHHHHH FWDGRANNVFNGFSPFGNRDPDAGIYVTSERSTVATKVRLALNDASAASQAVGPPGSPVE CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCHHHHHCCCCCCCCEE MSCGGRTFADIGRRMLDTLMLKQQRISSTDSVLAPVSGARRPTYRELIKNAFQPRLWNAT ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCC QNVLVGGVPYTQMEANFPLFFGLAIQMYEATLVSDQAPIDAYLQGDHTAMNAQQVEGMNL CCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHCCCCEE FLGKGKCVNCHGGPELTNAASRLLMHPRERIERMVMADNLTTLYDNGFYNTGVRPTSEDL EECCCCEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCEEECCCEECCCCCCCCHHH ALGGADAWGNPWSFTRQYNSVLQGGRSVDPLDVDVCTFEAPLSAAIPCDATLKPNVGFRD EECCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC SVDGAFKTPTLRNIALTGPYFHNGSRSTLKQVMEFYNRGGDRRGEDANNTSGFEHPAVNQ CCCCCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC HNTSNLDPDMTALNLTPDEIDALVKFMEVGLTDPRVAWERAPFDHPSLVIPQGHIGDENA CCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEECCCCCCCCCC VTQRPASPKVTTRQAMDASLNLKPYGAEGRPAAEGPLQPFYNDL CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MNISRLARLTFWLPIALSVHSAWAADPAVVDPPVSEVPSLQSLRGMVPPDPSGTEGGRKV CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCEEE DLMTDYVLNRQAAILLGKALFWDMEIGSDGSTACASCHYHAGVDHRITNQLNPGQAHTNA EEHHHHHHCCCHHHEEHHHHEEEEEECCCCCCHHHCCEECCCCCHHHHCCCCCCCCCCCC NVASIFNKPFVASDIPGDVASYATLSGGKGGPNYTLKKTDFPTHVLSNPLERNSPIVYST CHHHHHCCCCCCCCCCCHHHHHHEECCCCCCCCCEEECCCCCHHHHCCCHHCCCCEEEEC DDVVGSQGVFDANFVKPNQARFDKCTQQPDGIFQVGGINVRRSTGRNAPSVINAAFNVRN CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCEEEECCCCCCCCHHHHHHHHHHH FWDGRANNVFNGFSPFGNRDPDAGIYVTSERSTVATKVRLALNDASAASQAVGPPGSPVE CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCCHHHHHCCCCCCCCEE MSCGGRTFADIGRRMLDTLMLKQQRISSTDSVLAPVSGARRPTYRELIKNAFQPRLWNAT ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCC QNVLVGGVPYTQMEANFPLFFGLAIQMYEATLVSDQAPIDAYLQGDHTAMNAQQVEGMNL CCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHCCCCEE FLGKGKCVNCHGGPELTNAASRLLMHPRERIERMVMADNLTTLYDNGFYNTGVRPTSEDL EECCCCEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCEEECCCEECCCCCCCCHHH ALGGADAWGNPWSFTRQYNSVLQGGRSVDPLDVDVCTFEAPLSAAIPCDATLKPNVGFRD EECCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC SVDGAFKTPTLRNIALTGPYFHNGSRSTLKQVMEFYNRGGDRRGEDANNTSGFEHPAVNQ CCCCCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC HNTSNLDPDMTALNLTPDEIDALVKFMEVGLTDPRVAWERAPFDHPSLVIPQGHIGDENA CCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEECCCCCCCCCC VTQRPASPKVTTRQAMDASLNLKPYGAEGRPAAEGPLQPFYNDL CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2 Ferrocytochrome C; H2O2 [C]
Specific reaction: 2 Ferrocytochrome C + H2O2 = 2 Ferricytochrome C + 2 H2O. [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA