| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is trpE [H]
Identifier: 77461339
GI number: 77461339
Start: 5750351
End: 5751829
Strand: Reverse
Name: trpE [H]
Synonym: Pfl01_5118
Alternate gene names: 77461339
Gene position: 5751829-5750351 (Counterclockwise)
Preceding gene: 77461340
Following gene: 77461337
Centisome position: 89.34
GC content: 62.68
Gene sequence:
>1479_bases ATGATCCGCGAAGAATTCCTGCGTCTGGCCGCTGACGGCTACAACCGCATCCCGCTGGCCTGCGAAACCCTGGCCGACTT CGACACCCCGCTGTCGATCTACCTGAAACTGGCCGACCAGCCCAACTCCTACCTGCTCGAATCGGTGCAGGGCGGCGAGA AATGGGGCCGTTACTCGATCATCGGCCTGCCGTGCCGCACCGTGCTGCGGGTTCACGATCATCACGTGAGCATCACCGTC GATGGCGTCGAGACCGAAAGCCACGACGTCGAAGACCCGCTGGCCTTCGTCGAAACTTTCAAGGCCCGCTACAACGTGCC GACCATCGCCGGTCTGCCGCGCTTCAACGGCGGTCTGGTGGGTTACTTCGGTTACGACTGTGTGCGTTATGTAGAGAAGC GCCTCGGCAAATGCCCGAATCCGGATCCGCTGGGCGTGCCGGACATTCTGCTGATGGTCTCCGATGCGGTGGTGGTGTTC GACAACCTCGCCGGCAAGATGCACGCGATTGTGCTGGCCGATCCGGCGCAGGCCGATGCCTACGAACAGGGCCAGGCGCA ATTGCAGCAACTGCTGGAAAAACTGCGTCAGCCGATCACCCCGCGCCGTGGCCTGGATTTCAGCAAGCAGCAGGCGGCCG AGCCGGTGTTCCGCTCCAGTTTCACCCAGGACGACTACGAAAAAGCCGTCGACACCATCAAGGAATACATCCTCGCCGGT GACTGCATGCAGGTCGTGCCGTCCCAGCGCATGTCGATCGACTTCAAGGCGGCGCCGATCGATCTGTACCGCGCGCTGCG TTGCTTCAACCCGACGCCGTACATGTACTTCTTCAACTTCGGCGACTTCCACGTCGTCGGCAGTTCGCCGGAAGTGCTGG TGCGGGTCGAAGACAACCTGATCACCGTGCGCCCGATTGCCGGCACCCGTCCTCGCGGGGCTACCGAAGAAGCGGACGTG GCGCTGGAAGAAGACCTGCTGTCCGACGACAAGGAGATCGCCGAGCACCTGATGCTGATCGACCTCGGTCGCAACGACAC CGGGCGCGTATCGGAAATCGGCTCGGTGAAACTTACCGAGAAGATGGTCATCGAGCGTTATTCCAACGTGATGCACATCG TGTCCAACGTCACCGGCCAGTTGAAGGCCGGGCTGACGGCGATGGACGCACTGCGGGCGATCCTGCCGGCCGGCACCTTG TCCGGCGCACCGAAGATCCGCGCGATGGAAATCATCGACGAGCTGGAGCCGGTCAAGCGTGGTGTGTACGGCGGCGCGGT CGGATACTTCGCCTGGAACGGCAACATGGACACCGCGATTGCGATCCGTACCGCAGTGATCAAGAACGGCGAGTTGCATG TGCAGGCCGGTGGCGGCATCGTCGCCGATTCGGTGCCGGCGCTGGAGTGGGAAGAAACCATCAACAAGCGCCGGGCGATG TTCCGCGCTGTTGCGCTGGCCGAGCAAACCCCGGACTGA
Upstream 100 bases:
>100_bases CCCTGGCCCGCTGGCGTTGGCGCGCCTGACTTGTTCCTGGCCGGCTTGCCGGCGCGTTTGCACACCTGACTGATTTGCAC CTCACACCACGAGGCACCCT
Downstream 100 bases:
>100_bases GTCATTGATGATTCAGCCTAAAAAAATGCGGCGCCTGTGAAGGCGCCGCATTTTTTTTGCCTGCGAATCAGAAGTCGAGC GCTACGCCGACGTTGATCCC
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MIREEFLRLAADGYNRIPLACETLADFDTPLSIYLKLADQPNSYLLESVQGGEKWGRYSIIGLPCRTVLRVHDHHVSITV DGVETESHDVEDPLAFVETFKARYNVPTIAGLPRFNGGLVGYFGYDCVRYVEKRLGKCPNPDPLGVPDILLMVSDAVVVF DNLAGKMHAIVLADPAQADAYEQGQAQLQQLLEKLRQPITPRRGLDFSKQQAAEPVFRSSFTQDDYEKAVDTIKEYILAG DCMQVVPSQRMSIDFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVGSSPEVLVRVEDNLITVRPIAGTRPRGATEEADV ALEEDLLSDDKEIAEHLMLIDLGRNDTGRVSEIGSVKLTEKMVIERYSNVMHIVSNVTGQLKAGLTAMDALRAILPAGTL SGAPKIRAMEIIDELEPVKRGVYGGAVGYFAWNGNMDTAIAIRTAVIKNGELHVQAGGGIVADSVPALEWEETINKRRAM FRAVALAEQTPD
Sequences:
>Translated_492_residues MIREEFLRLAADGYNRIPLACETLADFDTPLSIYLKLADQPNSYLLESVQGGEKWGRYSIIGLPCRTVLRVHDHHVSITV DGVETESHDVEDPLAFVETFKARYNVPTIAGLPRFNGGLVGYFGYDCVRYVEKRLGKCPNPDPLGVPDILLMVSDAVVVF DNLAGKMHAIVLADPAQADAYEQGQAQLQQLLEKLRQPITPRRGLDFSKQQAAEPVFRSSFTQDDYEKAVDTIKEYILAG DCMQVVPSQRMSIDFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVGSSPEVLVRVEDNLITVRPIAGTRPRGATEEADV ALEEDLLSDDKEIAEHLMLIDLGRNDTGRVSEIGSVKLTEKMVIERYSNVMHIVSNVTGQLKAGLTAMDALRAILPAGTL SGAPKIRAMEIIDELEPVKRGVYGGAVGYFAWNGNMDTAIAIRTAVIKNGELHVQAGGGIVADSVPALEWEETINKRRAM FRAVALAEQTPD >Mature_492_residues MIREEFLRLAADGYNRIPLACETLADFDTPLSIYLKLADQPNSYLLESVQGGEKWGRYSIIGLPCRTVLRVHDHHVSITV DGVETESHDVEDPLAFVETFKARYNVPTIAGLPRFNGGLVGYFGYDCVRYVEKRLGKCPNPDPLGVPDILLMVSDAVVVF DNLAGKMHAIVLADPAQADAYEQGQAQLQQLLEKLRQPITPRRGLDFSKQQAAEPVFRSSFTQDDYEKAVDTIKEYILAG DCMQVVPSQRMSIDFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVGSSPEVLVRVEDNLITVRPIAGTRPRGATEEADV ALEEDLLSDDKEIAEHLMLIDLGRNDTGRVSEIGSVKLTEKMVIERYSNVMHIVSNVTGQLKAGLTAMDALRAILPAGTL SGAPKIRAMEIIDELEPVKRGVYGGAVGYFAWNGNMDTAIAIRTAVIKNGELHVQAGGGIVADSVPALEWEETINKRRAM FRAVALAEQTPD
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=408, Percent_Identity=39.7058823529412, Blast_Score=245, Evalue=6e-66, Organism=Escherichia coli, GI1788114, Length=445, Percent_Identity=33.2584269662921, Blast_Score=227, Evalue=1e-60, Organism=Escherichia coli, GI1786809, Length=285, Percent_Identity=27.719298245614, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87082077, Length=283, Percent_Identity=26.1484098939929, Blast_Score=80, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6320935, Length=477, Percent_Identity=39.4129979035639, Blast_Score=324, Evalue=2e-89, Organism=Saccharomyces cerevisiae, GI6324361, Length=393, Percent_Identity=28.498727735369, Blast_Score=133, Evalue=8e-32,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 54349; Mature: 54349
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIREEFLRLAADGYNRIPLACETLADFDTPLSIYLKLADQPNSYLLESVQGGEKWGRYSI CCHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCEEE IGLPCRTVLRVHDHHVSITVDGVETESHDVEDPLAFVETFKARYNVPTIAGLPRFNGGLV EECCHHHHHHEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEE GYFGYDCVRYVEKRLGKCPNPDPLGVPDILLMVSDAVVVFDNLAGKMHAIVLADPAQADA EHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCH YEQGQAQLQQLLEKLRQPITPRRGLDFSKQQAAEPVFRSSFTQDDYEKAVDTIKEYILAG HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHCC DCMQVVPSQRMSIDFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVGSSPEVLVRVEDNL CHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCEEEEEECCE ITVRPIAGTRPRGATEEADVALEEDLLSDDKEIAEHLMLIDLGRNDTGRVSEIGSVKLTE EEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHEEEEECCCCCCCCHHCCCCCHHHH KMVIERYSNVMHIVSNVTGQLKAGLTAMDALRAILPAGTLSGAPKIRAMEIIDELEPVKR HHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GVYGGAVGYFAWNGNMDTAIAIRTAVIKNGELHVQAGGGIVADSVPALEWEETINKRRAM CCCCCEEEEEEECCCCCCHHEEEEEEEECCEEEEEECCCEEECCCCCCCHHHHHHHHHHH FRAVALAEQTPD HHHHHHHHCCCC >Mature Secondary Structure MIREEFLRLAADGYNRIPLACETLADFDTPLSIYLKLADQPNSYLLESVQGGEKWGRYSI CCHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCEEE IGLPCRTVLRVHDHHVSITVDGVETESHDVEDPLAFVETFKARYNVPTIAGLPRFNGGLV EECCHHHHHHEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEE GYFGYDCVRYVEKRLGKCPNPDPLGVPDILLMVSDAVVVFDNLAGKMHAIVLADPAQADA EHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCH YEQGQAQLQQLLEKLRQPITPRRGLDFSKQQAAEPVFRSSFTQDDYEKAVDTIKEYILAG HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHCC DCMQVVPSQRMSIDFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVGSSPEVLVRVEDNL CHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCEEEEEECCE ITVRPIAGTRPRGATEEADVALEEDLLSDDKEIAEHLMLIDLGRNDTGRVSEIGSVKLTE EEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHEEEEECCCCCCCCHHCCCCCHHHH KMVIERYSNVMHIVSNVTGQLKAGLTAMDALRAILPAGTLSGAPKIRAMEIIDELEPVKR HHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GVYGGAVGYFAWNGNMDTAIAIRTAVIKNGELHVQAGGGIVADSVPALEWEETINKRRAM CCCCCEEEEEEECCCCCCHHEEEEEEEECCEEEEEECCCEEECCCCCCCHHHHHHHHHHH FRAVALAEQTPD HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2404959 [H]