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The map label for this gene is ycfF [C]

Identifier: 77461328

GI number: 77461328

Start: 5741145

End: 5741525

Strand: Direct

Name: ycfF [C]

Synonym: Pfl01_5107

Alternate gene names: 77461328

Gene position: 5741145-5741525 (Clockwise)

Preceding gene: 77461327

Following gene: 77461329

Centisome position: 89.17

GC content: 58.01

Gene sequence:

>381_bases
ATGAGTACACTCAGGCCAGCCCAAACAACGGAGAAAACAGCTGTGGATACTCTGTTCACCAAGATCATCAACCGGGAAAT
CCCGGCGAAGATCATCTACGAGGACGACCAGGTTCTGGCGTTCCACGACATCGCCCCACAGGCACCGGTGCATTTTCTGG
TGATCCCGAAGAAGCCGGTGCGCACCCTCAACGACCTGACCGAAGACGACAAGGCACTGGCCGGGCACATCCTGTTCACC
GCCCAACGTCTGGCGCTGGAACTGGGTTGCGAGGAAGGCTTCCGGGTGGTGATGAACTGCAATGAAATGGGCGGACAGAC
GGTCTACCACATTCACATGCACGTGCTCGGTCAACGCCAGATGAACTGGCCTCCGGGCTGA

Upstream 100 bases:

>100_bases
TTCGCGCTGGCTCAATCGCACGATTGTCGGCATGGTCAACAAGGCTTACTGCCCGCGCTGAAAAGCCCTACGGCAAAACA
CTGGGCGGGCTTATCCCCCT

Downstream 100 bases:

>100_bases
TTGAACTGCAGGCTCGGTGGGAGCGCCCTGCTCCCACATGACCCAGCGCAAACCTTCCCCGGCCGATTCGGTTAAACTGG
CCGCCGAGATTCTTCCCGGA

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSTLRPAQTTEKTAVDTLFTKIINREIPAKIIYEDDQVLAFHDIAPQAPVHFLVIPKKPVRTLNDLTEDDKALAGHILFT
AQRLALELGCEEGFRVVMNCNEMGGQTVYHIHMHVLGQRQMNWPPG

Sequences:

>Translated_126_residues
MSTLRPAQTTEKTAVDTLFTKIINREIPAKIIYEDDQVLAFHDIAPQAPVHFLVIPKKPVRTLNDLTEDDKALAGHILFT
AQRLALELGCEEGFRVVMNCNEMGGQTVYHIHMHVLGQRQMNWPPG
>Mature_125_residues
STLRPAQTTEKTAVDTLFTKIINREIPAKIIYEDDQVLAFHDIAPQAPVHFLVIPKKPVRTLNDLTEDDKALAGHILFTA
QRLALELGCEEGFRVVMNCNEMGGQTVYHIHMHVLGQRQMNWPPG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=111, Percent_Identity=57.6576576576577, Blast_Score=149, Evalue=4e-37,
Organism=Homo sapiens, GI14211923, Length=119, Percent_Identity=50.4201680672269, Blast_Score=142, Evalue=8e-35,
Organism=Escherichia coli, GI1787346, Length=107, Percent_Identity=49.5327102803738, Blast_Score=107, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17506713, Length=113, Percent_Identity=56.6371681415929, Blast_Score=148, Evalue=6e-37,
Organism=Drosophila melanogaster, GI28574010, Length=126, Percent_Identity=49.2063492063492, Blast_Score=144, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24581222, Length=126, Percent_Identity=49.2063492063492, Blast_Score=144, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 14218; Mature: 14086

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLRPAQTTEKTAVDTLFTKIINREIPAKIIYEDDQVLAFHDIAPQAPVHFLVIPKKPV
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCEEEEEECCCHH
RTLNDLTEDDKALAGHILFTAQRLALELGCEEGFRVVMNCNEMGGQTVYHIHMHVLGQRQ
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEEECCCC
MNWPPG
CCCCCC
>Mature Secondary Structure 
STLRPAQTTEKTAVDTLFTKIINREIPAKIIYEDDQVLAFHDIAPQAPVHFLVIPKKPV
CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCEEEEEECCCHH
RTLNDLTEDDKALAGHILFTAQRLALELGCEEGFRVVMNCNEMGGQTVYHIHMHVLGQRQ
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEEEECCCC
MNWPPG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108129; 1472710 [H]