Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77461249

Identifier: 77461249

GI number: 77461249

Start: 5660805

End: 5661323

Strand: Direct

Name: 77461249

Synonym: Pfl01_5028

Alternate gene names: NA

Gene position: 5660805-5661323 (Clockwise)

Preceding gene: 77461248

Following gene: 77461250

Centisome position: 87.92

GC content: 64.16

Gene sequence:

>519_bases
ATGCCCCGCGCTGCCCTTGCGCTGCTGTTGCTGGTCGCCCTGCCCGTGTGGGCGGCGGCGCCGAAAGACCTGACCTGGTC
GGAGATGATCCCGCCGGACGCAGCGCCCGAAGTGCCGAACATGACGCCGCTGCATGACCTGTCGAAGATGAGCGATGCGC
TGTCCGCCGAGTCTGCGCCAGCGGCCAAGCAGGACATGCCCAACGCCCCCGTGGTGCAAAGCCTCGACGGCCAGAACATC
CGCCTGCCGGGCTACATCGTACCGCTGGAAGTCAGCGAAGAAGGTCGCACCACGGACTTCCTGCTGGTGCCGTATTTCGG
CGCCTGCATCCACGTGCCGCCGCCACCCTCGAACCAGATCGTGCACGTGAAAAGCGAACTCGGCGTGAAGCTCGACGAGC
TGTATCAGCCGTACTGGGTCGAGGGGCCGTTGCAGGTCAAGCAGTCCACCAGCGAACTGGCCGATGCCGGGTATCAGATG
GAAGCGGACAAGATTTATGTGTACGAGCTACCGGAGTAA

Upstream 100 bases:

>100_bases
TTCTGGCTGCCGCGCTGCTGATGGGCAGCGTGCCGGCCTGGCGCGCGTATCGCCAATCCCTGGCCGATGGCCTGTCGATC
CGTTTATGAGGATGTTCACC

Downstream 100 bases:

>100_bases
ACCTGCGGGTTCTTTATTGCTTGCCAGCGATGAGGCCATGAAAGTTCCACAAAAAACCGGGGCATCACTGTTTCATTGAG
CTGAGTCAAAAGACCGTATC

Product: putative lipoprotein

Products: NA

Alternate protein names: Conserved Secreted Protein

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MPRAALALLLLVALPVWAAAPKDLTWSEMIPPDAAPEVPNMTPLHDLSKMSDALSAESAPAAKQDMPNAPVVQSLDGQNI
RLPGYIVPLEVSEEGRTTDFLLVPYFGACIHVPPPPSNQIVHVKSELGVKLDELYQPYWVEGPLQVKQSTSELADAGYQM
EADKIYVYELPE

Sequences:

>Translated_172_residues
MPRAALALLLLVALPVWAAAPKDLTWSEMIPPDAAPEVPNMTPLHDLSKMSDALSAESAPAAKQDMPNAPVVQSLDGQNI
RLPGYIVPLEVSEEGRTTDFLLVPYFGACIHVPPPPSNQIVHVKSELGVKLDELYQPYWVEGPLQVKQSTSELADAGYQM
EADKIYVYELPE
>Mature_171_residues
PRAALALLLLVALPVWAAAPKDLTWSEMIPPDAAPEVPNMTPLHDLSKMSDALSAESAPAAKQDMPNAPVVQSLDGQNIR
LPGYIVPLEVSEEGRTTDFLLVPYFGACIHVPPPPSNQIVHVKSELGVKLDELYQPYWVEGPLQVKQSTSELADAGYQME
ADKIYVYELPE

Specific function: Unknown

COG id: COG3495

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18787; Mature: 18656

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRAALALLLLVALPVWAAAPKDLTWSEMIPPDAAPEVPNMTPLHDLSKMSDALSAESAP
CCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
AAKQDMPNAPVVQSLDGQNIRLPGYIVPLEVSEEGRTTDFLLVPYFGACIHVPPPPSNQI
CHHHCCCCCCCEECCCCCEEECCCEEEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCE
VHVKSELGVKLDELYQPYWVEGPLQVKQSTSELADAGYQMEADKIYVYELPE
EEEHHHHCCCHHHHCCCEECCCCHHHHHHHHHHHHCCCEEECCEEEEEECCC
>Mature Secondary Structure 
PRAALALLLLVALPVWAAAPKDLTWSEMIPPDAAPEVPNMTPLHDLSKMSDALSAESAP
CHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
AAKQDMPNAPVVQSLDGQNIRLPGYIVPLEVSEEGRTTDFLLVPYFGACIHVPPPPSNQI
CHHHCCCCCCCEECCCCCEEECCCEEEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCE
VHVKSELGVKLDELYQPYWVEGPLQVKQSTSELADAGYQMEADKIYVYELPE
EEEHHHHCCCHHHHCCCEECCCCHHHHHHHHHHHHCCCEEECCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA