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The map label for this gene is 77461248

Identifier: 77461248

GI number: 77461248

Start: 5659528

End: 5660793

Strand: Direct

Name: 77461248

Synonym: Pfl01_5027

Alternate gene names: NA

Gene position: 5659528-5660793 (Clockwise)

Preceding gene: 77461247

Following gene: 77461249

Centisome position: 87.9

GC content: 63.11

Gene sequence:

>1266_bases
ATGTATCTGTTCCGTCTGGCCATGGCCAGCCTCGCCAACCGGCGTTTCACTGCCCTGCTTACCGCATTCGCCATCGCCCT
CTCCGTCTGCCTGCTGCTGGCGGTGGAGCGGGTGCGCACCGAAGCCAAGGCCAGTTTCGCCAGCACCATCAGCGGCACTG
ACCTGATCGTCGGCGCCCGTTCCGGTTCGGTGAACCTGTTGCTGTACTCGGTATTCCGCATCGGCAACGCCACCAACAAC
ATTCGCTGGGACAGCTTCGAACACTTCGCCAGCAATCCGAAGGTGAAGTGGGCAATTCCGATGTCCCTCGGCGATTCCCA
TCGCGGCTACCGGGTGATGGGCACCACCGAAGCGTATTTCGAGCATTACCAGTACGGTCGCCAGCAGCATCTGCAACTGG
CGGACGGCCGCGCCTTCGCCACCGATCCGTTCGAAGTGGTGCTCGGTGCCGAAGTGGCCGAAGCGTTGCATTACAAGCTC
GGCGACAAACTGGTACTGGCCCACGGCGTGGCGGCGATCAGTCTGGTCAAGCACGATGACAAGCCGTTCACCGTGGTCGG
GATTCTCAAGCGCACCGGCACCCCGGTGGATCGTACGTTGCACATCAGCCTCGGCGGCATGGAGGCGATCCACATCGACT
GGCACAACGGCGTACCGGCCCGTGGCAACGGGCGGATCAGTGCCGATCAGGCACGCAACATGGACCTGACGCCGCAAGCG
ATCACCGCGTTCATGCTCGGCCTCAACAGCAAGATCTCGACCTTTGCCCTGCAACGGGAAATCAACGAATTCCGTGGCGA
GCCGATGCTGGCGATCCTGCCGGGCGTGGCCTTGCAGGAGTTGTGGAGCCTGATGAGTACCGCCGAAAGAGCACTGTTCG
TGGTCTCGCTGTTCGTGGTGCTGACCGGGCTGATCGGCATGCTCACCGCGATTCTCACCAGCCTCAACGAGCGTCGCCGC
GAAATGGCGATCCTGCGCTCGGTGGGCGCGCGACCGTGGCACATCGCAAGCCTGCTGGTGCTGGAGGCGTTTGCTCTGGC
ACTGACCGGGGTGATCGCCGGGCTGGCGTTGCTGTACCTCGGCATCGCTGCGGCACAAGGTTATGTGCAGGCCAATTACG
GGCTGTATCTGCCGCTGGCGTGGCCAAGCGAGTATGAATGGACGCTGCTCGGTGGCATTCTGGCTGCCGCGCTGCTGATG
GGCAGCGTGCCGGCCTGGCGCGCGTATCGCCAATCCCTGGCCGATGGCCTGTCGATCCGTTTATGA

Upstream 100 bases:

>100_bases
CTGTTGTTCGTCAGCCACGACCAGAGCCTGGCGCCGCTGTTCGACCGTCACCTGTCCCTGGCCGAACTCAATCGCGCCGC
CACGTCTGCCGAGGTCTGAG

Downstream 100 bases:

>100_bases
GGATGTTCACCATGCCCCGCGCTGCCCTTGCGCTGCTGTTGCTGGTCGCCCTGCCCGTGTGGGCGGCGGCGCCGAAAGAC
CTGACCTGGTCGGAGATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Peptide ABC Transporter Permease; Efflux ABC Transporter Permease Protein; ABC Efflux Transporter Permease Protein; ABC Transporter Permease; ABC-Type Transport System Permease Component; Peptide ABC Transporter Permease Component; Transmembrane Protein; ABC Transporter Membrane Protein; Permease Component Protein; ABC Transporter Permease Protein; ABC Transport System Permease Protein; Antimicrobial Peptide ABC Transporter Permease; ABC Transporter Transmembrane Permease; ABC-Type Transport System Permease

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MYLFRLAMASLANRRFTALLTAFAIALSVCLLLAVERVRTEAKASFASTISGTDLIVGARSGSVNLLLYSVFRIGNATNN
IRWDSFEHFASNPKVKWAIPMSLGDSHRGYRVMGTTEAYFEHYQYGRQQHLQLADGRAFATDPFEVVLGAEVAEALHYKL
GDKLVLAHGVAAISLVKHDDKPFTVVGILKRTGTPVDRTLHISLGGMEAIHIDWHNGVPARGNGRISADQARNMDLTPQA
ITAFMLGLNSKISTFALQREINEFRGEPMLAILPGVALQELWSLMSTAERALFVVSLFVVLTGLIGMLTAILTSLNERRR
EMAILRSVGARPWHIASLLVLEAFALALTGVIAGLALLYLGIAAAQGYVQANYGLYLPLAWPSEYEWTLLGGILAAALLM
GSVPAWRAYRQSLADGLSIRL

Sequences:

>Translated_421_residues
MYLFRLAMASLANRRFTALLTAFAIALSVCLLLAVERVRTEAKASFASTISGTDLIVGARSGSVNLLLYSVFRIGNATNN
IRWDSFEHFASNPKVKWAIPMSLGDSHRGYRVMGTTEAYFEHYQYGRQQHLQLADGRAFATDPFEVVLGAEVAEALHYKL
GDKLVLAHGVAAISLVKHDDKPFTVVGILKRTGTPVDRTLHISLGGMEAIHIDWHNGVPARGNGRISADQARNMDLTPQA
ITAFMLGLNSKISTFALQREINEFRGEPMLAILPGVALQELWSLMSTAERALFVVSLFVVLTGLIGMLTAILTSLNERRR
EMAILRSVGARPWHIASLLVLEAFALALTGVIAGLALLYLGIAAAQGYVQANYGLYLPLAWPSEYEWTLLGGILAAALLM
GSVPAWRAYRQSLADGLSIRL
>Mature_421_residues
MYLFRLAMASLANRRFTALLTAFAIALSVCLLLAVERVRTEAKASFASTISGTDLIVGARSGSVNLLLYSVFRIGNATNN
IRWDSFEHFASNPKVKWAIPMSLGDSHRGYRVMGTTEAYFEHYQYGRQQHLQLADGRAFATDPFEVVLGAEVAEALHYKL
GDKLVLAHGVAAISLVKHDDKPFTVVGILKRTGTPVDRTLHISLGGMEAIHIDWHNGVPARGNGRISADQARNMDLTPQA
ITAFMLGLNSKISTFALQREINEFRGEPMLAILPGVALQELWSLMSTAERALFVVSLFVVLTGLIGMLTAILTSLNERRR
EMAILRSVGARPWHIASLLVLEAFALALTGVIAGLALLYLGIAAAQGYVQANYGLYLPLAWPSEYEWTLLGGILAAALLM
GSVPAWRAYRQSLADGLSIRL

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45952; Mature: 45952

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLFRLAMASLANRRFTALLTAFAIALSVCLLLAVERVRTEAKASFASTISGTDLIVGAR
CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
SGSVNLLLYSVFRIGNATNNIRWDSFEHFASNPKVKWAIPMSLGDSHRGYRVMGTTEAYF
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCEEEECCHHHHH
EHYQYGRQQHLQLADGRAFATDPFEVVLGAEVAEALHYKLGDKLVLAHGVAAISLVKHDD
HHHHHCHHHHCEECCCCEECCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHEEEECCC
KPFTVVGILKRTGTPVDRTLHISLGGMEAIHIDWHNGVPARGNGRISADQARNMDLTPQA
CCEEEEEEHHHCCCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCCCHHHCCCCCCCHHH
ITAFMLGLNSKISTFALQREINEFRGEPMLAILPGVALQELWSLMSTAERALFVVSLFVV
HHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LTGLIGMLTAILTSLNERRREMAILRSVGARPWHIASLLVLEAFALALTGVIAGLALLYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIAAAQGYVQANYGLYLPLAWPSEYEWTLLGGILAAALLMGSVPAWRAYRQSLADGLSIR
HHHHHCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEC
L
C
>Mature Secondary Structure
MYLFRLAMASLANRRFTALLTAFAIALSVCLLLAVERVRTEAKASFASTISGTDLIVGAR
CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
SGSVNLLLYSVFRIGNATNNIRWDSFEHFASNPKVKWAIPMSLGDSHRGYRVMGTTEAYF
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCEEEECCHHHHH
EHYQYGRQQHLQLADGRAFATDPFEVVLGAEVAEALHYKLGDKLVLAHGVAAISLVKHDD
HHHHHCHHHHCEECCCCEECCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHEEEECCC
KPFTVVGILKRTGTPVDRTLHISLGGMEAIHIDWHNGVPARGNGRISADQARNMDLTPQA
CCEEEEEEHHHCCCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCCCHHHCCCCCCCHHH
ITAFMLGLNSKISTFALQREINEFRGEPMLAILPGVALQELWSLMSTAERALFVVSLFVV
HHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LTGLIGMLTAILTSLNERRREMAILRSVGARPWHIASLLVLEAFALALTGVIAGLALLYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIAAAQGYVQANYGLYLPLAWPSEYEWTLLGGILAAALLMGSVPAWRAYRQSLADGLSIR
HHHHHCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA