| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461225
Identifier: 77461225
GI number: 77461225
Start: 5640481
End: 5641626
Strand: Direct
Name: 77461225
Synonym: Pfl01_5004
Alternate gene names: NA
Gene position: 5640481-5641626 (Clockwise)
Preceding gene: 77461218
Following gene: 77461226
Centisome position: 87.61
GC content: 58.99
Gene sequence:
>1146_bases ATGGCAACTCACTGGATCTGGCAGCAACCCGATTGGCCCGACTTCAACTGGCAGGCAGAGCATCTCACTGCGCTGTTGCG CGAATGCGTTCAGGCGCAGGGACAATTGATGGGCATGGCGGGATCAGTGGGCAATTCACTGAGCGCTCAGACTGAGCTGG ACGCGTTGCTGCAGAACATCGTGACCTCCTCGGCCATCGAGGGGGAGCAGTTGAATATTGAATCCGTGCGTTCTTCATTG GCACGACGTCTGGGGCTGGAATCACCGGATGGCGACAACGTCAGCAAGCGCAGCGAGGGGCTGGCGCAACTGATGCTCGA TGCCACTCAACGTTTTGCCGAACCGCTGACGCTGGAACGATTGCTGGAATGGCACTCATGGCTGTTTCCAGAACAGGAGA GTGGTTTCCTTTCGCGAGCAATCAATGTAGGCGCATTACGCGGCGATGAGCCGATGCAGGTGGTTTCCGGGCGAATCGAC CGCCCGACCGTGCACTTCGAGGCGCCACCGCGACAAGGGCTTGAGCGACAACTCGACAGTTTTCTCACATGGTTCGACGC CAGTCAGCATCAGGCAGGCCTCGATCCTTTGCTGCGAGCAGGCATCGCGCATTTCTGGTTCGTCACCTTGCACCCGTTCG ATGACGGCAACGGGCGCCTGACTCGCATCCTCACCGATCTGGCATTGGCTCAAGGCGAAGCGCAGGCCATTCGTTTTTAT GCGATGTCCGCCAGCATTCTCGACGACCGCGCGGGCTATTACCGGATTCTCGAATCGAGCCAGAAAGCCACGCTGGACAT CACAGACTGGCTCGCATGGTTCCTGCAAACCCTGCTGCGCAGTCTGCAACAGGCCATCGCGCGGATTGAAAGTGTGTTGG GAAAATCACGCTTCTGGCAGGCGCACCGGGAATCCGGGCTGTCGGCGGAGCAGATCAAAGTGCTCAATCGTTTGCTCGAC GGTGGTGAGCGCGGTTTCGAACACGGTATCAGCGCAGCGCAATACCAGAGTGTGGCCAAGGTCTCCAAAGCCACGGCCAC CCGACATCTGGCGGAACTGCTGGAAAAGGGCTGCCTGCAACGTCTTCCGGGCGGCGGACGCAGCACTCGGTATCAGATTC AATATCCTGGCGAATCGACCGACTGA
Upstream 100 bases:
>100_bases GGCGACTAGTGGACGATGAGCCGAATAGGCGTCATATTCGGCTCACGAAATGAGCCGAATAGCACTTCTATTCGGCTCAC GCACTCAGGAACGGCATTTC
Downstream 100 bases:
>100_bases CACCCTTGTCCGTCGGCCCGCTCATTTGCCCATACCCCCCCTATCTGCTAGTGTCGCGCCGGTTTAACGTCAACCGGAAT TAGCCGCCATGGCCCGCAAA
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MATHWIWQQPDWPDFNWQAEHLTALLRECVQAQGQLMGMAGSVGNSLSAQTELDALLQNIVTSSAIEGEQLNIESVRSSL ARRLGLESPDGDNVSKRSEGLAQLMLDATQRFAEPLTLERLLEWHSWLFPEQESGFLSRAINVGALRGDEPMQVVSGRID RPTVHFEAPPRQGLERQLDSFLTWFDASQHQAGLDPLLRAGIAHFWFVTLHPFDDGNGRLTRILTDLALAQGEAQAIRFY AMSASILDDRAGYYRILESSQKATLDITDWLAWFLQTLLRSLQQAIARIESVLGKSRFWQAHRESGLSAEQIKVLNRLLD GGERGFEHGISAAQYQSVAKVSKATATRHLAELLEKGCLQRLPGGGRSTRYQIQYPGESTD
Sequences:
>Translated_381_residues MATHWIWQQPDWPDFNWQAEHLTALLRECVQAQGQLMGMAGSVGNSLSAQTELDALLQNIVTSSAIEGEQLNIESVRSSL ARRLGLESPDGDNVSKRSEGLAQLMLDATQRFAEPLTLERLLEWHSWLFPEQESGFLSRAINVGALRGDEPMQVVSGRID RPTVHFEAPPRQGLERQLDSFLTWFDASQHQAGLDPLLRAGIAHFWFVTLHPFDDGNGRLTRILTDLALAQGEAQAIRFY AMSASILDDRAGYYRILESSQKATLDITDWLAWFLQTLLRSLQQAIARIESVLGKSRFWQAHRESGLSAEQIKVLNRLLD GGERGFEHGISAAQYQSVAKVSKATATRHLAELLEKGCLQRLPGGGRSTRYQIQYPGESTD >Mature_380_residues ATHWIWQQPDWPDFNWQAEHLTALLRECVQAQGQLMGMAGSVGNSLSAQTELDALLQNIVTSSAIEGEQLNIESVRSSLA RRLGLESPDGDNVSKRSEGLAQLMLDATQRFAEPLTLERLLEWHSWLFPEQESGFLSRAINVGALRGDEPMQVVSGRIDR PTVHFEAPPRQGLERQLDSFLTWFDASQHQAGLDPLLRAGIAHFWFVTLHPFDDGNGRLTRILTDLALAQGEAQAIRFYA MSASILDDRAGYYRILESSQKATLDITDWLAWFLQTLLRSLQQAIARIESVLGKSRFWQAHRESGLSAEQIKVLNRLLDG GERGFEHGISAAQYQSVAKVSKATATRHLAELLEKGCLQRLPGGGRSTRYQIQYPGESTD
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003812 [H]
Pfam domain/function: PF02661 Fic [H]
EC number: NA
Molecular weight: Translated: 42590; Mature: 42459
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHWIWQQPDWPDFNWQAEHLTALLRECVQAQGQLMGMAGSVGNSLSAQTELDALLQNI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH VTSSAIEGEQLNIESVRSSLARRLGLESPDGDNVSKRSEGLAQLMLDATQRFAEPLTLER HHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH LLEWHSWLFPEQESGFLSRAINVGALRGDEPMQVVSGRIDRPTVHFEAPPRQGLERQLDS HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEECCCCHHHHHHHHHH FLTWFDASQHQAGLDPLLRAGIAHFWFVTLHPFDDGNGRLTRILTDLALAQGEAQAIRFY HHHHHCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHH AMSASILDDRAGYYRILESSQKATLDITDWLAWFLQTLLRSLQQAIARIESVLGKSRFWQ HHHHHHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHRESGLSAEQIKVLNRLLDGGERGFEHGISAAQYQSVAKVSKATATRHLAELLEKGCLQ HHHHCCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLPGGGRSTRYQIQYPGESTD HCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure ATHWIWQQPDWPDFNWQAEHLTALLRECVQAQGQLMGMAGSVGNSLSAQTELDALLQNI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH VTSSAIEGEQLNIESVRSSLARRLGLESPDGDNVSKRSEGLAQLMLDATQRFAEPLTLER HHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH LLEWHSWLFPEQESGFLSRAINVGALRGDEPMQVVSGRIDRPTVHFEAPPRQGLERQLDS HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEECCCCHHHHHHHHHH FLTWFDASQHQAGLDPLLRAGIAHFWFVTLHPFDDGNGRLTRILTDLALAQGEAQAIRFY HHHHHCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHH AMSASILDDRAGYYRILESSQKATLDITDWLAWFLQTLLRSLQQAIARIESVLGKSRFWQ HHHHHHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHRESGLSAEQIKVLNRLLDGGERGFEHGISAAQYQSVAKVSKATATRHLAELLEKGCLQ HHHHCCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLPGGGRSTRYQIQYPGESTD HCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]