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The map label for this gene is yfaP [H]

Identifier: 77461224

GI number: 77461224

Start: 5639412

End: 5640203

Strand: Reverse

Name: yfaP [H]

Synonym: Pfl01_5003

Alternate gene names: 77461224

Gene position: 5640203-5639412 (Counterclockwise)

Preceding gene: 77461230

Following gene: 77461223

Centisome position: 87.6

GC content: 61.99

Gene sequence:

>792_bases
ATGCGTTCACTTCTTTTGCTGCTGATCGGCCTGGCCTGCGTGCCGGCGCTGTCGGCTGCACCGAGTGCCGAGATGTCGGA
ACCGGTGGGCGGCTGGCGCTATCACGGGCTGCTCGATCGCACGGAAAACCCGCAGGTCGCCTATCCCACGCCGCCCATCG
ATCGCGGCATCCAGCGCAATCGCACGATGATCGAGGGTCAGCTCAAGGCCATCGGGCATTTGCGTCCGCCGCACAGCCTG
GCGGTGAATGGCAATCCACTGAATCTGTACACCGACGACCAGGGCCGTTTTGCCCGGCCGTATGCGTTTGGCGCCGGTTC
CAACAGTGTCGAGGTGATCAGCGCCGACGGCCAGTCGCTCAAGCGCGTTCAATTCTACGAAGCCAACAATTTGCGCACGC
CGGCGCGGATCCGCGTGGTGCTCGGTTGGGACGACCCTAAAGCCGAACTCGACCTGCACGTCATTACGCCTGACGGCCAG
CACGCCTTCTGGGCGCGGCCGGCGATGAGCAACGGCGGCGGCCTCGATCCGGACGGCGTCGATGGCCCCGGCCCGGAAAT
GTTCACCATGACTGCGCCGCTGCACGGCACCTATCTGGTTTACGTCAACTATTGGGGCAACTTCGGTAACGGCGGCTATA
ACTTCGAGGAGACCAGCAACCAGAACGAGGTGATCACCTCGCAGATCACGCTGGTGCTCAACGAAAACACCGTCGACGAA
AAACGCGAAACGTTCATCGTGCCCCTGCGGGCCATCGGTGATCTGCTGCTGGTCAAGACTTTCAACTATTAA

Upstream 100 bases:

>100_bases
CCGACAGTCACGGGTCTTTCAGACGAAACGCAGTTTTCACCGCTGTGAAGTACCGAGGATCGGGTGCAAGGTTTCGTTCA
GGCATGGCAGGAGGCATCAC

Downstream 100 bases:

>100_bases
GCATCCCGCACCACGGATGAACTGCCGAGCTTTGGGAACATGAGCGAGAAGATGAGCGATAACACTGCGACCCCGGCTAC
CGACGCGCCCGTCGCCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MRSLLLLLIGLACVPALSAAPSAEMSEPVGGWRYHGLLDRTENPQVAYPTPPIDRGIQRNRTMIEGQLKAIGHLRPPHSL
AVNGNPLNLYTDDQGRFARPYAFGAGSNSVEVISADGQSLKRVQFYEANNLRTPARIRVVLGWDDPKAELDLHVITPDGQ
HAFWARPAMSNGGGLDPDGVDGPGPEMFTMTAPLHGTYLVYVNYWGNFGNGGYNFEETSNQNEVITSQITLVLNENTVDE
KRETFIVPLRAIGDLLLVKTFNY

Sequences:

>Translated_263_residues
MRSLLLLLIGLACVPALSAAPSAEMSEPVGGWRYHGLLDRTENPQVAYPTPPIDRGIQRNRTMIEGQLKAIGHLRPPHSL
AVNGNPLNLYTDDQGRFARPYAFGAGSNSVEVISADGQSLKRVQFYEANNLRTPARIRVVLGWDDPKAELDLHVITPDGQ
HAFWARPAMSNGGGLDPDGVDGPGPEMFTMTAPLHGTYLVYVNYWGNFGNGGYNFEETSNQNEVITSQITLVLNENTVDE
KRETFIVPLRAIGDLLLVKTFNY
>Mature_263_residues
MRSLLLLLIGLACVPALSAAPSAEMSEPVGGWRYHGLLDRTENPQVAYPTPPIDRGIQRNRTMIEGQLKAIGHLRPPHSL
AVNGNPLNLYTDDQGRFARPYAFGAGSNSVEVISADGQSLKRVQFYEANNLRTPARIRVVLGWDDPKAELDLHVITPDGQ
HAFWARPAMSNGGGLDPDGVDGPGPEMFTMTAPLHGTYLVYVNYWGNFGNGGYNFEETSNQNEVITSQITLVLNENTVDE
KRETFIVPLRAIGDLLLVKTFNY

Specific function: Unknown

COG id: COG4676

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788556, Length=270, Percent_Identity=40, Blast_Score=192, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019220
- InterPro:   IPR012039 [H]

Pfam domain/function: PF09906 DUF2135 [H]

EC number: NA

Molecular weight: Translated: 28918; Mature: 28918

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLLLLLIGLACVPALSAAPSAEMSEPVGGWRYHGLLDRTENPQVAYPTPPIDRGIQRN
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCHHCCHHCC
RTMIEGQLKAIGHLRPPHSLAVNGNPLNLYTDDQGRFARPYAFGAGSNSVEVISADGQSL
CEEEEEHHHHHCCCCCCCEEEECCCEEEEEECCCCCEECCEEECCCCCCEEEEECCCCCE
KRVQFYEANNLRTPARIRVVLGWDDPKAELDLHVITPDGQHAFWARPAMSNGGGLDPDGV
EEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCC
DGPGPEMFTMTAPLHGTYLVYVNYWGNFGNGGYNFEETSNQNEVITSQITLVLNENTVDE
CCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCC
KRETFIVPLRAIGDLLLVKTFNY
CCCEEEEEHHHHCCEEEEEEECC
>Mature Secondary Structure
MRSLLLLLIGLACVPALSAAPSAEMSEPVGGWRYHGLLDRTENPQVAYPTPPIDRGIQRN
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCHHCCHHCC
RTMIEGQLKAIGHLRPPHSLAVNGNPLNLYTDDQGRFARPYAFGAGSNSVEVISADGQSL
CEEEEEHHHHHCCCCCCCEEEECCCEEEEEECCCCCEECCEEECCCCCCEEEEECCCCCE
KRVQFYEANNLRTPARIRVVLGWDDPKAELDLHVITPDGQHAFWARPAMSNGGGLDPDGV
EEEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCC
DGPGPEMFTMTAPLHGTYLVYVNYWGNFGNGGYNFEETSNQNEVITSQITLVLNENTVDE
CCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCC
KRETFIVPLRAIGDLLLVKTFNY
CCCEEEEEHHHHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]