| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yfaT [C]
Identifier: 77461222
GI number: 77461222
Start: 5637013
End: 5637651
Strand: Reverse
Name: yfaT [C]
Synonym: Pfl01_5001
Alternate gene names: 77461222
Gene position: 5637651-5637013 (Counterclockwise)
Preceding gene: 77461223
Following gene: 77461221
Centisome position: 87.56
GC content: 62.13
Gene sequence:
>639_bases GTGACCGGACTGATTCGCAGCCTCGGCTTGCTGGCGCTTTTGCTCAGCGCCGGTGCCCGAGCCGTTGAGACTCCGGCCCT CGATCCGCAGCAGTCCCAGGTCTTTCGCGCCTGGTTCGTGCGCATCGCCCAGGAACAATTGAGCAAAGGTCCGAGCCCGC GCTGGTATCAGCAGGACTGCGCGGGACTGGTGCGTTTCGCCGCCAACGAAGCGCTGAAAGTCCATGACGACAAATGGCTG CGCAGCAATGGCGTGTCCAACCGCTACCTGCCGCCGGAGCTGGACCTGAGCGCCGACCAGCGCAAGCTCGCCCAGCAATG GCAGCAGGGCGGCGGCAAGGTCGGGCCCTACGTCAACGCGATCAAACTGATTCAGTTCAACAGCCATCTGATCGGCCGCG ACGTGTCCCAGGCACGGCCCGGCGATCTGATGTTTTTCGATCAGGGCGACGACCAGCACCTGATGATCTGGATGGGCCGC TACATCGCCTATCACACCGGCACGACCACCCCAACCGACAACGGCATGCGTTCGGCAAGCCTGCAGCAACTCATGACATG GAAGGACACCCGATGGATACCCGACGCAGCCAACCCCAACTTCATCGGCGTCTATCGACTGAATTTTCTCTCCCAATGA
Upstream 100 bases:
>100_bases TGCGCACCCTCGGCGGCATGGGCAAATACGCCCTGACCTTGCCGGAAGGCAGCGAGCCTGACGGTCACTGGCAATGGCTG CCGCTGGAGTGGAAAGCGCT
Downstream 100 bases:
>100_bases CCGGTGCCCGCATGCTGCGTTTACTGCCTTTTCTGTTGCTGTTGACCCTGCCGTTTTCGGCCGTGAATGCCGAAGACACC GTGGAGCCAAGCGGCTACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTGLIRSLGLLALLLSAGARAVETPALDPQQSQVFRAWFVRIAQEQLSKGPSPRWYQQDCAGLVRFAANEALKVHDDKWL RSNGVSNRYLPPELDLSADQRKLAQQWQQGGGKVGPYVNAIKLIQFNSHLIGRDVSQARPGDLMFFDQGDDQHLMIWMGR YIAYHTGTTTPTDNGMRSASLQQLMTWKDTRWIPDAANPNFIGVYRLNFLSQ
Sequences:
>Translated_212_residues MTGLIRSLGLLALLLSAGARAVETPALDPQQSQVFRAWFVRIAQEQLSKGPSPRWYQQDCAGLVRFAANEALKVHDDKWL RSNGVSNRYLPPELDLSADQRKLAQQWQQGGGKVGPYVNAIKLIQFNSHLIGRDVSQARPGDLMFFDQGDDQHLMIWMGR YIAYHTGTTTPTDNGMRSASLQQLMTWKDTRWIPDAANPNFIGVYRLNFLSQ >Mature_211_residues TGLIRSLGLLALLLSAGARAVETPALDPQQSQVFRAWFVRIAQEQLSKGPSPRWYQQDCAGLVRFAANEALKVHDDKWLR SNGVSNRYLPPELDLSADQRKLAQQWQQGGGKVGPYVNAIKLIQFNSHLIGRDVSQARPGDLMFFDQGDDQHLMIWMGRY IAYHTGTTTPTDNGMRSASLQQLMTWKDTRWIPDAANPNFIGVYRLNFLSQ
Specific function: Unknown
COG id: COG3234
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfaT and T.maritima TM0986 [H]
Homologues:
Organism=Escherichia coli, GI87082068, Length=204, Percent_Identity=69.6078431372549, Blast_Score=317, Evalue=5e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009558 [H]
Pfam domain/function: PF06672 DUF1175 [H]
EC number: NA
Molecular weight: Translated: 23902; Mature: 23771
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLIRSLGLLALLLSAGARAVETPALDPQQSQVFRAWFVRIAQEQLSKGPSPRWYQQDC CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AGLVRFAANEALKVHDDKWLRSNGVSNRYLPPELDLSADQRKLAQQWQQGGGKVGPYVNA HHHHHHHHCCCEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHE IKLIQFNSHLIGRDVSQARPGDLMFFDQGDDQHLMIWMGRYIAYHTGTTTPTDNGMRSAS EEEEEECCCHHCCCHHHCCCCCEEEEECCCCCEEEEEEHHHHHEECCCCCCCCCCHHHHH LQQLMTWKDTRWIPDAANPNFIGVYRLNFLSQ HHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure TGLIRSLGLLALLLSAGARAVETPALDPQQSQVFRAWFVRIAQEQLSKGPSPRWYQQDC CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AGLVRFAANEALKVHDDKWLRSNGVSNRYLPPELDLSADQRKLAQQWQQGGGKVGPYVNA HHHHHHHHCCCEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHE IKLIQFNSHLIGRDVSQARPGDLMFFDQGDDQHLMIWMGRYIAYHTGTTTPTDNGMRSAS EEEEEECCCHHCCCHHHCCCCCEEEEECCCCCEEEEEEHHHHHEECCCCCCCCCCHHHHH LQQLMTWKDTRWIPDAANPNFIGVYRLNFLSQ HHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]