| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is mltB [H]
Identifier: 77461182
GI number: 77461182
Start: 5589057
End: 5590379
Strand: Direct
Name: mltB [H]
Synonym: Pfl01_4961
Alternate gene names: 77461182
Gene position: 5589057-5590379 (Clockwise)
Preceding gene: 77461181
Following gene: 77461196
Centisome position: 86.81
GC content: 63.95
Gene sequence:
>1323_bases ATGCCCCTCAGTCTTTCCCGTCGTTGGCCCTTCCGCCAACTGATCGCTGCCTCCAGCTTCGTACTGCTCGTCGCCTGCGC GGAAAAACCCACCGCCGCCGACGCTCAACCGCTTCAGACCGCCCCCGTTGCCACAGCCCCAGCGATCCTCCCGCCGGTAG TGCCGTCCGGTGACAACCTCGACCTGCAACCGACCCAGACCTTTGCCGAATGGCAGGCCGGTTTCCGCAAGGAAGCTCTG GCCGCCGGCATCCGTGCCGACCTGTTTGACCGCGCATTTGCCAATGTCAGCTTCGATGCCAGCGTGATTCGCGCCGACCG CAGCCAGCCGGAATTCGCCCGGCCCGTCTGGGAATACCTGGACGGTGCCCTTTCGCCCTTGCGCGTGCGCAAAGGCCAGG CCCTGATCAGCCAGTACGCCGATATCCTGCAAAGCATCGAGCAGCGCTATGGTGTCGATCGCCAGGCGCTGGTGTCGGTG TGGGGGATGGAAAGCAACTTCGGCCAGTTCCAGGGCAGCAAGTCGGTGATCAATTCGCTGGCCACTCTGGCCTATGAAGG CCGCCGCCCGGGCTTTGCCCATGCGCAGTTGATTGCGGCGTTGCAGATCCTGCAACAGGGCGACATCACGCCGGAAAAAA TGCTCGGTTCCTGGGCTGGCGCCATGGGCCAGACCCAGTTCATCCCGACCACCTACAACACCCACGCCGTGGACTTCGAC GGTGACGGTCGCCGCGACATCTGGGGCAGCCCGGCTGACGCTCTGGCATCCACCGCGCATTACCTGCAAAGCTCCGGCTG GCAGCGTGGCCAGCCGTGGGGCTTCGAAGTCCAGCTACCAAGCGGTTTCAACTACACCCTGGCCGACGGCGCGATTCGTA AAAGCGTTGCTGAATGGCGGCAACTGGGCGTGATCCTGCCGAACGGAGGCCAGGTTCCAGCCGGTTCCGAGCAACTGTCC GCTGCCCTGCTGCTGCCGGCCGGCTATCGCGGACCGGCGTTCCTGATCCTCGACAACTTCCGGGCGATCCTCAAGTACAA CAACTCGTCGTCCTACGCACTGGCCGTCAGCCTGTTGTCCGAGCGCTTCAACGGTGCCGGCCTGATCAATGGCACCTGGC CAAAGGATGACCTGCCGCTGAGCCGCACTGAGCGGATCGAACTGCAAAACCTGCTCACTGCGCGCAACTACGACGCCGGT GCGGCAGACGGGATCATCGGCGCCAATACGCGCAAGGCGATCCGCAGTGCGCAGCAGTCATTCGGCTGGCCGGCGGACGG TTATCCGACGCACAAACTGCTGGAAAGCCTGCGTAACCAGTAA
Upstream 100 bases:
>100_bases TCTGACAGCTGGGAGGCTTCTTACTTTCTGGCCGCTTGAAGCACAGCACCCCTTCCTCATGTTAAGGTCTGCACCTGATT CGTATTCCCTGGACCTGTGC
Downstream 100 bases:
>100_bases AGACAAAAGACCGCCGCCTCTTCAGGCGGCGGTCTTTTTTTGTGGCTCGATCAGCGAATCACTACATCCTGTTCCAGCAT CAATTCTTTCTTCCCTGCAT
Product: lytic murein transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MPLSLSRRWPFRQLIAASSFVLLVACAEKPTAADAQPLQTAPVATAPAILPPVVPSGDNLDLQPTQTFAEWQAGFRKEAL AAGIRADLFDRAFANVSFDASVIRADRSQPEFARPVWEYLDGALSPLRVRKGQALISQYADILQSIEQRYGVDRQALVSV WGMESNFGQFQGSKSVINSLATLAYEGRRPGFAHAQLIAALQILQQGDITPEKMLGSWAGAMGQTQFIPTTYNTHAVDFD GDGRRDIWGSPADALASTAHYLQSSGWQRGQPWGFEVQLPSGFNYTLADGAIRKSVAEWRQLGVILPNGGQVPAGSEQLS AALLLPAGYRGPAFLILDNFRAILKYNNSSSYALAVSLLSERFNGAGLINGTWPKDDLPLSRTERIELQNLLTARNYDAG AADGIIGANTRKAIRSAQQSFGWPADGYPTHKLLESLRNQ
Sequences:
>Translated_440_residues MPLSLSRRWPFRQLIAASSFVLLVACAEKPTAADAQPLQTAPVATAPAILPPVVPSGDNLDLQPTQTFAEWQAGFRKEAL AAGIRADLFDRAFANVSFDASVIRADRSQPEFARPVWEYLDGALSPLRVRKGQALISQYADILQSIEQRYGVDRQALVSV WGMESNFGQFQGSKSVINSLATLAYEGRRPGFAHAQLIAALQILQQGDITPEKMLGSWAGAMGQTQFIPTTYNTHAVDFD GDGRRDIWGSPADALASTAHYLQSSGWQRGQPWGFEVQLPSGFNYTLADGAIRKSVAEWRQLGVILPNGGQVPAGSEQLS AALLLPAGYRGPAFLILDNFRAILKYNNSSSYALAVSLLSERFNGAGLINGTWPKDDLPLSRTERIELQNLLTARNYDAG AADGIIGANTRKAIRSAQQSFGWPADGYPTHKLLESLRNQ >Mature_439_residues PLSLSRRWPFRQLIAASSFVLLVACAEKPTAADAQPLQTAPVATAPAILPPVVPSGDNLDLQPTQTFAEWQAGFRKEALA AGIRADLFDRAFANVSFDASVIRADRSQPEFARPVWEYLDGALSPLRVRKGQALISQYADILQSIEQRYGVDRQALVSVW GMESNFGQFQGSKSVINSLATLAYEGRRPGFAHAQLIAALQILQQGDITPEKMLGSWAGAMGQTQFIPTTYNTHAVDFDG DGRRDIWGSPADALASTAHYLQSSGWQRGQPWGFEVQLPSGFNYTLADGAIRKSVAEWRQLGVILPNGGQVPAGSEQLSA ALLLPAGYRGPAFLILDNFRAILKYNNSSSYALAVSLLSERFNGAGLINGTWPKDDLPLSRTERIELQNLLTARNYDAGA ADGIIGANTRKAIRSAQQSFGWPADGYPTHKLLESLRNQ
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=360, Percent_Identity=29.7222222222222, Blast_Score=125, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 47831; Mature: 47700
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSLSRRWPFRQLIAASSFVLLVACAEKPTAADAQPLQTAPVATAPAILPPVVPSGDNL CCCCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DLQPTQTFAEWQAGFRKEALAAGIRADLFDRAFANVSFDASVIRADRSQPEFARPVWEYL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHH DGALSPLRVRKGQALISQYADILQSIEQRYGVDRQALVSVWGMESNFGQFQGSKSVINSL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHCCCHHHHHHHH ATLAYEGRRPGFAHAQLIAALQILQQGDITPEKMLGSWAGAMGQTQFIPTTYNTHAVDFD HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCCEEEECC GDGRRDIWGSPADALASTAHYLQSSGWQRGQPWGFEVQLPSGFNYTLADGAIRKSVAEWR CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEECCCHHHHHHHHHHH QLGVILPNGGQVPAGSEQLSAALLLPAGYRGPAFLILDNFRAILKYNNSSSYALAVSLLS HCCEECCCCCCCCCCHHHHCEEEEECCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHH ERFNGAGLINGTWPKDDLPLSRTERIELQNLLTARNYDAGAADGIIGANTRKAIRSAQQS HHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH FGWPADGYPTHKLLESLRNQ CCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure PLSLSRRWPFRQLIAASSFVLLVACAEKPTAADAQPLQTAPVATAPAILPPVVPSGDNL CCCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DLQPTQTFAEWQAGFRKEALAAGIRADLFDRAFANVSFDASVIRADRSQPEFARPVWEYL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHH DGALSPLRVRKGQALISQYADILQSIEQRYGVDRQALVSVWGMESNFGQFQGSKSVINSL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHCCCHHHHHHHH ATLAYEGRRPGFAHAQLIAALQILQQGDITPEKMLGSWAGAMGQTQFIPTTYNTHAVDFD HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCCEEEECC GDGRRDIWGSPADALASTAHYLQSSGWQRGQPWGFEVQLPSGFNYTLADGAIRKSVAEWR CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEECCCHHHHHHHHHHH QLGVILPNGGQVPAGSEQLSAALLLPAGYRGPAFLILDNFRAILKYNNSSSYALAVSLLS HCCEECCCCCCCCCCHHHHCEEEEECCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHH ERFNGAGLINGTWPKDDLPLSRTERIELQNLLTARNYDAGAADGIIGANTRKAIRSAQQS HHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH FGWPADGYPTHKLLESLRNQ CCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]