| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ybeZ [H]
Identifier: 77461172
GI number: 77461172
Start: 5578938
End: 5579942
Strand: Direct
Name: ybeZ [H]
Synonym: Pfl01_4951
Alternate gene names: 77461172
Gene position: 5578938-5579942 (Clockwise)
Preceding gene: 77461171
Following gene: 77461173
Centisome position: 86.65
GC content: 61.09
Gene sequence:
>1005_bases TTGAACGCACCCATCGAACCACATCGTTTCATCCTCGAGCCCTTTGAGGCTCGCCGCTTCGCCAATCTGTGCGGGCAGTT CGACGAGCACTTGCGGCTGATCGAACAGCGCCTGGCCATCGAGATCCGCAACCGCGGCAATCAGTTCGAGCTGATCGGCG AACCCAAGCACACCACTTCCGCGGAAAACCTGATTCGCCGCCTGTACCGGGAAACCAAGGGTTCAGAGCTGTCGCCGGAT ACGGTTCACCTGTTCCTCCAGGAATCGGCTGTCGAGCAACTGGACAACCACGCCCCCGCCGAAGCCTCCGTCGCCCTGCG CACCAAGAAAGGCATGATTCGCCCACGCGGCCTGAATCAGCTGCGCTATGTGAAAGAAATCCTTGGCAACGACATCAACT TCGGCATCGGCCCGGCCGGTACCGGCAAGACCTATCTGGCCGTGGCCTGCGCCGTCGATGCCCTGGAGCGCGAGCAGATC CGCCGCATCCTGCTGGTGCGTCCGGCGGTCGAAGCGGGTGAAAAACTCGGCTTCCTGCCCGGCGACCTGTCGCAGAAGAT CGACCCTTACCTGCGCCCGCTCTACGACGCGCTCTATGAAATGCTCGGCTTCGAATACGTGGCCAAGCTGATCGAGCGTC AGGTGATCGAAGTCGCGCCGCTGGCCTACATGCGCGGTCGCACGCTGAACAACAGCTTCATCATTCTCGATGAGAGCCAG AACACCACCGTCGAACAGATGAAGATGTTCCTGACCCGGATCGGTTTCGGCTCCACGGCCGTGATCACCGGCGACATCAC CCAGGTCGACCTGCCGCGCGGCACCAAATCCGGACTTCATCACGTCATCGAAGTCCTGAAAGATGTGCCGGGCATCAGCT TCACCCACTTCCAGCCCAAAGACGTGGTGCGCCATCCGTTGGTGCAACGCATCGTCGAAGCCTACGAGCGCTTCGAGACG CGTTTGGCCGATGAAGCGCCAAAGGACACCCGCCACGATGCTTGA
Upstream 100 bases:
>100_bases CGGCTGAATCGATGCAAGGCTTTTTAAGAGCTTTCGCACCCACGCCGCTGGCGTTATCCTTGATTTCATCCTAATTGCCC CAGGGCGGCTAAATACGACC
Downstream 100 bases:
>100_bases GCTTGACCTGCAAATCGCGACCGAAGCGCCTGCGCCGACCGAAGCCGAGTTCCGCCAATGGTGCGAACTGGCCCTGCGCC AGCGCACAGCCGACTCGGAA
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MNAPIEPHRFILEPFEARRFANLCGQFDEHLRLIEQRLAIEIRNRGNQFELIGEPKHTTSAENLIRRLYRETKGSELSPD TVHLFLQESAVEQLDNHAPAEASVALRTKKGMIRPRGLNQLRYVKEILGNDINFGIGPAGTGKTYLAVACAVDALEREQI RRILLVRPAVEAGEKLGFLPGDLSQKIDPYLRPLYDALYEMLGFEYVAKLIERQVIEVAPLAYMRGRTLNNSFIILDESQ NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPRGTKSGLHHVIEVLKDVPGISFTHFQPKDVVRHPLVQRIVEAYERFET RLADEAPKDTRHDA
Sequences:
>Translated_334_residues MNAPIEPHRFILEPFEARRFANLCGQFDEHLRLIEQRLAIEIRNRGNQFELIGEPKHTTSAENLIRRLYRETKGSELSPD TVHLFLQESAVEQLDNHAPAEASVALRTKKGMIRPRGLNQLRYVKEILGNDINFGIGPAGTGKTYLAVACAVDALEREQI RRILLVRPAVEAGEKLGFLPGDLSQKIDPYLRPLYDALYEMLGFEYVAKLIERQVIEVAPLAYMRGRTLNNSFIILDESQ NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPRGTKSGLHHVIEVLKDVPGISFTHFQPKDVVRHPLVQRIVEAYERFET RLADEAPKDTRHDA >Mature_334_residues MNAPIEPHRFILEPFEARRFANLCGQFDEHLRLIEQRLAIEIRNRGNQFELIGEPKHTTSAENLIRRLYRETKGSELSPD TVHLFLQESAVEQLDNHAPAEASVALRTKKGMIRPRGLNQLRYVKEILGNDINFGIGPAGTGKTYLAVACAVDALEREQI RRILLVRPAVEAGEKLGFLPGDLSQKIDPYLRPLYDALYEMLGFEYVAKLIERQVIEVAPLAYMRGRTLNNSFIILDESQ NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPRGTKSGLHHVIEVLKDVPGISFTHFQPKDVVRHPLVQRIVEAYERFET RLADEAPKDTRHDA
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=322, Percent_Identity=63.0434782608696, Blast_Score=387, Evalue=1e-109, Organism=Escherichia coli, GI1787257, Length=206, Percent_Identity=44.6601941747573, Blast_Score=190, Evalue=1e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 37875; Mature: 37875
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPIEPHRFILEPFEARRFANLCGQFDEHLRLIEQRLAIEIRNRGNQFELIGEPKHTTS CCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC AENLIRRLYRETKGSELSPDTVHLFLQESAVEQLDNHAPAEASVALRTKKGMIRPRGLNQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHCCCCCCCCCHH LRYVKEILGNDINFGIGPAGTGKTYLAVACAVDALEREQIRRILLVRPAVEAGEKLGFLP HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC GDLSQKIDPYLRPLYDALYEMLGFEYVAKLIERQVIEVAPLAYMRGRTLNNSFIILDESQ CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPRGTKSGLHHVIEVLKDVPGISFTHFQPK CCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHH DVVRHPLVQRIVEAYERFETRLADEAPKDTRHDA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNAPIEPHRFILEPFEARRFANLCGQFDEHLRLIEQRLAIEIRNRGNQFELIGEPKHTTS CCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC AENLIRRLYRETKGSELSPDTVHLFLQESAVEQLDNHAPAEASVALRTKKGMIRPRGLNQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHCCCCCCCCCHH LRYVKEILGNDINFGIGPAGTGKTYLAVACAVDALEREQIRRILLVRPAVEAGEKLGFLP HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC GDLSQKIDPYLRPLYDALYEMLGFEYVAKLIERQVIEVAPLAYMRGRTLNNSFIILDESQ CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPRGTKSGLHHVIEVLKDVPGISFTHFQPK CCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHH DVVRHPLVQRIVEAYERFETRLADEAPKDTRHDA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]