Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is ybeZ [H]

Identifier: 77461172

GI number: 77461172

Start: 5578938

End: 5579942

Strand: Direct

Name: ybeZ [H]

Synonym: Pfl01_4951

Alternate gene names: 77461172

Gene position: 5578938-5579942 (Clockwise)

Preceding gene: 77461171

Following gene: 77461173

Centisome position: 86.65

GC content: 61.09

Gene sequence:

>1005_bases
TTGAACGCACCCATCGAACCACATCGTTTCATCCTCGAGCCCTTTGAGGCTCGCCGCTTCGCCAATCTGTGCGGGCAGTT
CGACGAGCACTTGCGGCTGATCGAACAGCGCCTGGCCATCGAGATCCGCAACCGCGGCAATCAGTTCGAGCTGATCGGCG
AACCCAAGCACACCACTTCCGCGGAAAACCTGATTCGCCGCCTGTACCGGGAAACCAAGGGTTCAGAGCTGTCGCCGGAT
ACGGTTCACCTGTTCCTCCAGGAATCGGCTGTCGAGCAACTGGACAACCACGCCCCCGCCGAAGCCTCCGTCGCCCTGCG
CACCAAGAAAGGCATGATTCGCCCACGCGGCCTGAATCAGCTGCGCTATGTGAAAGAAATCCTTGGCAACGACATCAACT
TCGGCATCGGCCCGGCCGGTACCGGCAAGACCTATCTGGCCGTGGCCTGCGCCGTCGATGCCCTGGAGCGCGAGCAGATC
CGCCGCATCCTGCTGGTGCGTCCGGCGGTCGAAGCGGGTGAAAAACTCGGCTTCCTGCCCGGCGACCTGTCGCAGAAGAT
CGACCCTTACCTGCGCCCGCTCTACGACGCGCTCTATGAAATGCTCGGCTTCGAATACGTGGCCAAGCTGATCGAGCGTC
AGGTGATCGAAGTCGCGCCGCTGGCCTACATGCGCGGTCGCACGCTGAACAACAGCTTCATCATTCTCGATGAGAGCCAG
AACACCACCGTCGAACAGATGAAGATGTTCCTGACCCGGATCGGTTTCGGCTCCACGGCCGTGATCACCGGCGACATCAC
CCAGGTCGACCTGCCGCGCGGCACCAAATCCGGACTTCATCACGTCATCGAAGTCCTGAAAGATGTGCCGGGCATCAGCT
TCACCCACTTCCAGCCCAAAGACGTGGTGCGCCATCCGTTGGTGCAACGCATCGTCGAAGCCTACGAGCGCTTCGAGACG
CGTTTGGCCGATGAAGCGCCAAAGGACACCCGCCACGATGCTTGA

Upstream 100 bases:

>100_bases
CGGCTGAATCGATGCAAGGCTTTTTAAGAGCTTTCGCACCCACGCCGCTGGCGTTATCCTTGATTTCATCCTAATTGCCC
CAGGGCGGCTAAATACGACC

Downstream 100 bases:

>100_bases
GCTTGACCTGCAAATCGCGACCGAAGCGCCTGCGCCGACCGAAGCCGAGTTCCGCCAATGGTGCGAACTGGCCCTGCGCC
AGCGCACAGCCGACTCGGAA

Product: PhoH-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MNAPIEPHRFILEPFEARRFANLCGQFDEHLRLIEQRLAIEIRNRGNQFELIGEPKHTTSAENLIRRLYRETKGSELSPD
TVHLFLQESAVEQLDNHAPAEASVALRTKKGMIRPRGLNQLRYVKEILGNDINFGIGPAGTGKTYLAVACAVDALEREQI
RRILLVRPAVEAGEKLGFLPGDLSQKIDPYLRPLYDALYEMLGFEYVAKLIERQVIEVAPLAYMRGRTLNNSFIILDESQ
NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPRGTKSGLHHVIEVLKDVPGISFTHFQPKDVVRHPLVQRIVEAYERFET
RLADEAPKDTRHDA

Sequences:

>Translated_334_residues
MNAPIEPHRFILEPFEARRFANLCGQFDEHLRLIEQRLAIEIRNRGNQFELIGEPKHTTSAENLIRRLYRETKGSELSPD
TVHLFLQESAVEQLDNHAPAEASVALRTKKGMIRPRGLNQLRYVKEILGNDINFGIGPAGTGKTYLAVACAVDALEREQI
RRILLVRPAVEAGEKLGFLPGDLSQKIDPYLRPLYDALYEMLGFEYVAKLIERQVIEVAPLAYMRGRTLNNSFIILDESQ
NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPRGTKSGLHHVIEVLKDVPGISFTHFQPKDVVRHPLVQRIVEAYERFET
RLADEAPKDTRHDA
>Mature_334_residues
MNAPIEPHRFILEPFEARRFANLCGQFDEHLRLIEQRLAIEIRNRGNQFELIGEPKHTTSAENLIRRLYRETKGSELSPD
TVHLFLQESAVEQLDNHAPAEASVALRTKKGMIRPRGLNQLRYVKEILGNDINFGIGPAGTGKTYLAVACAVDALEREQI
RRILLVRPAVEAGEKLGFLPGDLSQKIDPYLRPLYDALYEMLGFEYVAKLIERQVIEVAPLAYMRGRTLNNSFIILDESQ
NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPRGTKSGLHHVIEVLKDVPGISFTHFQPKDVVRHPLVQRIVEAYERFET
RLADEAPKDTRHDA

Specific function: Unknown

COG id: COG1702

COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phoH family [H]

Homologues:

Organism=Escherichia coli, GI145693103, Length=322, Percent_Identity=63.0434782608696, Blast_Score=387, Evalue=1e-109,
Organism=Escherichia coli, GI1787257, Length=206, Percent_Identity=44.6601941747573, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003714 [H]

Pfam domain/function: PF02562 PhoH [H]

EC number: NA

Molecular weight: Translated: 37875; Mature: 37875

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPIEPHRFILEPFEARRFANLCGQFDEHLRLIEQRLAIEIRNRGNQFELIGEPKHTTS
CCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
AENLIRRLYRETKGSELSPDTVHLFLQESAVEQLDNHAPAEASVALRTKKGMIRPRGLNQ
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHCCCCCCCCCHH
LRYVKEILGNDINFGIGPAGTGKTYLAVACAVDALEREQIRRILLVRPAVEAGEKLGFLP
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
GDLSQKIDPYLRPLYDALYEMLGFEYVAKLIERQVIEVAPLAYMRGRTLNNSFIILDESQ
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPRGTKSGLHHVIEVLKDVPGISFTHFQPK
CCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHH
DVVRHPLVQRIVEAYERFETRLADEAPKDTRHDA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNAPIEPHRFILEPFEARRFANLCGQFDEHLRLIEQRLAIEIRNRGNQFELIGEPKHTTS
CCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
AENLIRRLYRETKGSELSPDTVHLFLQESAVEQLDNHAPAEASVALRTKKGMIRPRGLNQ
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHCCCCCCCCCHH
LRYVKEILGNDINFGIGPAGTGKTYLAVACAVDALEREQIRRILLVRPAVEAGEKLGFLP
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
GDLSQKIDPYLRPLYDALYEMLGFEYVAKLIERQVIEVAPLAYMRGRTLNNSFIILDESQ
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPRGTKSGLHHVIEVLKDVPGISFTHFQPK
CCHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHH
DVVRHPLVQRIVEAYERFETRLADEAPKDTRHDA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]