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The map label for this gene is ypfJ [H]

Identifier: 77461134

GI number: 77461134

Start: 5536755

End: 5537642

Strand: Direct

Name: ypfJ [H]

Synonym: Pfl01_4913

Alternate gene names: 77461134

Gene position: 5536755-5537642 (Clockwise)

Preceding gene: 77461133

Following gene: 77461135

Centisome position: 86.0

GC content: 62.39

Gene sequence:

>888_bases
ATGCTATGGAAAAAAGGCCGACGCAGTGACAACGTCGTCGATGCCCGTGGCGATGACATGGGCGGTGGTGGCGGCATGCG
CTTCGGCGGTGGCAAGGGCCTGAGTCTCGGGGCGATCCTGCTGATCGTCGGCATCGGCTGGATCACCGGGCAGGACCCGC
TGCAGATCCTTGGCCAGCTCACCGGGCAGATGACCGAACAATCGACCCCTACTTCGCAAACCCGTCAGGCACCGCCGGCC
AACGATGAACAGGCCGAATTCGTACGCTCGATCCTCGGCGACACCGAAGACACCTGGGGCGCGATCTTCCAGCAGGCCGG
CCGGCAATATAAGGATCCGACCCTGGTGCTGTTCAGCAACCGGGTCAATTCCGCCTGCGGTCTGGCGACCTCGGCCACCG
GCCCGTTCTATTGCCCGGCGGACCAGAAAGTCTATCTCGACATGGCGTTCTTCCAGGAAATGGCCCAACGCTTCAAGGCC
GCCGGCGACTTCGCCCAGGCCTACGTGATCGCTCATGAAGTCGGACACCATGTGCAGACGCTTCTCGGTGTCTCGGCGAA
AATTCAGACAGCCCGCCAGCAAGGCCGGCAGATGGAAGGTGACGGCGGACTGCTTGTGCGTCAGGAACTGCAAGCCGATT
GTCTGGCCGGGGTCTGGGCCTACAACGCGCAGAAACGCTTGAACTGGCTGGAACCGGGCGACATCGAAGAAGCCTTGAAC
GCAGCGAACGCCATCGGTGATGATCGCCTGCAACAACAGGGTCAGGGCCGCGTGGTGCCGGACTCGTTTACCCACGGTAC
GTCGGCGCAAAGGGTGCGCTGGTTCAAAACCGGATTCGCCCAGGGCCAGGTCGGCCAGTGCGATACCTTTGCGGCGAAAA
ACCTGTAA

Upstream 100 bases:

>100_bases
CGGGCCTTTGTGCGTCTGTACGAATAGACGGACGACCGGACTGGCGCCACACTCACACACCGGCAACACTCATCACCACC
TACAGATAGAGGATTCCCAC

Downstream 100 bases:

>100_bases
ATGCATAAATGGCTGTTGGCTTTACTGTTCATCGGCGGCACCGCCCAAGCGGCCGGCGTCGACGCAATCAGTCCCGGGCG
CCTGCAATTGCAGGCCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MLWKKGRRSDNVVDARGDDMGGGGGMRFGGGKGLSLGAILLIVGIGWITGQDPLQILGQLTGQMTEQSTPTSQTRQAPPA
NDEQAEFVRSILGDTEDTWGAIFQQAGRQYKDPTLVLFSNRVNSACGLATSATGPFYCPADQKVYLDMAFFQEMAQRFKA
AGDFAQAYVIAHEVGHHVQTLLGVSAKIQTARQQGRQMEGDGGLLVRQELQADCLAGVWAYNAQKRLNWLEPGDIEEALN
AANAIGDDRLQQQGQGRVVPDSFTHGTSAQRVRWFKTGFAQGQVGQCDTFAAKNL

Sequences:

>Translated_295_residues
MLWKKGRRSDNVVDARGDDMGGGGGMRFGGGKGLSLGAILLIVGIGWITGQDPLQILGQLTGQMTEQSTPTSQTRQAPPA
NDEQAEFVRSILGDTEDTWGAIFQQAGRQYKDPTLVLFSNRVNSACGLATSATGPFYCPADQKVYLDMAFFQEMAQRFKA
AGDFAQAYVIAHEVGHHVQTLLGVSAKIQTARQQGRQMEGDGGLLVRQELQADCLAGVWAYNAQKRLNWLEPGDIEEALN
AANAIGDDRLQQQGQGRVVPDSFTHGTSAQRVRWFKTGFAQGQVGQCDTFAAKNL
>Mature_295_residues
MLWKKGRRSDNVVDARGDDMGGGGGMRFGGGKGLSLGAILLIVGIGWITGQDPLQILGQLTGQMTEQSTPTSQTRQAPPA
NDEQAEFVRSILGDTEDTWGAIFQQAGRQYKDPTLVLFSNRVNSACGLATSATGPFYCPADQKVYLDMAFFQEMAQRFKA
AGDFAQAYVIAHEVGHHVQTLLGVSAKIQTARQQGRQMEGDGGLLVRQELQADCLAGVWAYNAQKRLNWLEPGDIEEALN
AANAIGDDRLQQQGQGRVVPDSFTHGTSAQRVRWFKTGFAQGQVGQCDTFAAKNL

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=293, Percent_Identity=51.1945392491468, Blast_Score=270, Evalue=6e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31926; Mature: 31926

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWKKGRRSDNVVDARGDDMGGGGGMRFGGGKGLSLGAILLIVGIGWITGQDPLQILGQL
CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
TGQMTEQSTPTSQTRQAPPANDEQAEFVRSILGDTEDTWGAIFQQAGRQYKDPTLVLFSN
HHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEC
RVNSACGLATSATGPFYCPADQKVYLDMAFFQEMAQRFKAAGDFAQAYVIAHEVGHHVQT
CCCHHHCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGVSAKIQTARQQGRQMEGDGGLLVRQELQADCLAGVWAYNAQKRLNWLEPGDIEEALN
HHHHHHHHHHHHHHCCEECCCCCEEEHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHH
AANAIGDDRLQQQGQGRVVPDSFTHGTSAQRVRWFKTGFAQGQVGQCDTFAAKNL
HHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MLWKKGRRSDNVVDARGDDMGGGGGMRFGGGKGLSLGAILLIVGIGWITGQDPLQILGQL
CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
TGQMTEQSTPTSQTRQAPPANDEQAEFVRSILGDTEDTWGAIFQQAGRQYKDPTLVLFSN
HHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEC
RVNSACGLATSATGPFYCPADQKVYLDMAFFQEMAQRFKAAGDFAQAYVIAHEVGHHVQT
CCCHHHCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGVSAKIQTARQQGRQMEGDGGLLVRQELQADCLAGVWAYNAQKRLNWLEPGDIEEALN
HHHHHHHHHHHHHHCCEECCCCCEEEHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHH
AANAIGDDRLQQQGQGRVVPDSFTHGTSAQRVRWFKTGFAQGQVGQCDTFAAKNL
HHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]