| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461092
Identifier: 77461092
GI number: 77461092
Start: 5489715
End: 5491568
Strand: Direct
Name: 77461092
Synonym: Pfl01_4871
Alternate gene names: NA
Gene position: 5489715-5491568 (Clockwise)
Preceding gene: 77461091
Following gene: 77461093
Centisome position: 85.27
GC content: 61.43
Gene sequence:
>1854_bases ATGCTCAAACGCCTTGCCTGGCTGGCGCTGTGTGTCTGCGCCCCGCTGTCCGCCGCGCCCCACATCGACCCTCAACGTTT GCAGCAACTGGCCAACGACCGATTCTGGATTTCCCTCGGCCATTACGAAACCGCCAAGCTCGGTGGCTGGCGCAGCTACG TCAGTGACAAAAAATTCTTCCTCGCCCCCGACGGCAACGAACACCCCGACCATGAACTGGCCGCCACCGTGCAGGCGCTG TACGCCCCCGCCAGTCTCGGTGAGCAACACGCCCAGTGCGTCTACCCGGCACGCACCCGCTGGCTGAAAGATCAACTCAA CCTGACCGACCTGCCGACGCCGGACTGCGCCGAATTCAAGAAATGGTTCAAGGACGTCTCCCCCCACAGCGCAGTGATGA TTTTCCCGGCGGCCTATCTCAACAGCCCGTCGTCGATGTTCGGCCATACCCTGCTGCGCATCGACCAGGCCGACGTGCAA AGCGACAAGACTTCGCTGCTCAGTTACGCGATCAACTTCGGCGCCTACATCGAAGGCTCGGACAACAGCATTCTTTACGC CTGGAAAGGCCTGATGGGTGGTTATCCGGGACTGTTCGCGCTGGTGCCGTATCAGGAAAAACTCTCGGAATACCGCAGCC TGGAAAACCGCGACCTGTGGGAATACCGGCTCAATCTGACGCAAGCCGAAACAGCGCGGATGGTCGAGCATGTGTGGGAG CTGAAGCAGATCCAGTTCGACTACTTCTTCTTCGATGAAAACTGCTCCTATCGCCTGCTCGAACTGTTGCAGGTCGCCCG TCCGAGCCTGCGCCTGACCGAGCAATTCCCGCTGACGGCGATCCCCACCGACACCGTCAAAGCGGTGAAGGAAGCCGGTC TGGTCGAGCACATCGAATACCGCCCGTCCCGCGAGCGCGAATTGCTCAGCCGCGCCGAACCCCTGAGCGGCGAAGAACAG GACTGGGTGCTGAAGGTCAGCGCCGATCAACAGCAACTTCAGGACCCGGCCTTCAAGGCCCTGCCTCGGGATCGCCAGGC GCTGATTGTTGACGCGGCGTATCGGCTGGAGCGCTACCGCGCCAACGGCCAGGAACGGGATCCACTGCGCGCCCAGCGCA GTTTCGAACTGCTGCGGGCGATCAACAAGAACCCGGCGCCGGAGCTGCAGATTCCTCAACCGGGCCTGCCCGAAGACGGA CACGAATCGCGCACCTGGCAGGCCGGTCTCGGCACTCGCGGTGACCGCGCATTCGGCGAGTACGGCTTGCGCATGGCCTA TCACGACCTCAACGACAACGCCGAGAGTTTCCCCCTCGGCGCACAGATCGAAATCCTGCAGATGAAGCTGCGCCAGTACG AAGGCAATCACTGGCAGTTCCAGCAACTGGATCTGGCGACCATCCGCTCGCTGACGCCGCGCAATGCGCTGTTGCAACCG CTGTCGTGGCAAGTCACCGGTGGTCTTGAACGCGTACCGGGCAAGCACGATGACGAGACATTGGTCAGCCACGTCAACGG TGGCGGTGGCGGCACCTGGGCGTTGGCTGACGATGTGCTGGGGTTCGCCCTCGGCACGGTGCGCGTTGAACACAACAATG ATTTCGCCGAGTTCGTTTCCCCCGCAGGCGGTTTCAATACCGGCGTACTGTGGAAAAACCCGTTGGGCAATCTCAGCCTG GAGGCCAAAGGTGATTACTTCTTCAACGGTGAAGTACGCCGTAGCCTGAGCCTGAATCAGCAGTGGGAATTGTCGCGCAA CCTCGGCCTGCGTCTGAGCGCCCAGCGTGAGTTCAGCCATCTGGCCACGCCGGAGACCGAAGTGATGCTGGAAGTGAAGT GGTATCACTACTGA
Upstream 100 bases:
>100_bases AGGCTTAAGCTCGACCCACCCGCTTCCTTCGGGAAGCGGGTTTTATTTTTTCGGCCCGCCCTTTCCGGGCTTTGTTTCTT TTCGACTTAAGTTGCCATTT
Downstream 100 bases:
>100_bases GGTTTTGATCTTTCTTTCACGACCCATCGACGAATCCGCTTCTAGACTTTCCTTATCAGCCGTTTGACGGCCCGGGAGAG TGTGATGTGGCGGTGTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 617; Mature: 617
Protein sequence:
>617_residues MLKRLAWLALCVCAPLSAAPHIDPQRLQQLANDRFWISLGHYETAKLGGWRSYVSDKKFFLAPDGNEHPDHELAATVQAL YAPASLGEQHAQCVYPARTRWLKDQLNLTDLPTPDCAEFKKWFKDVSPHSAVMIFPAAYLNSPSSMFGHTLLRIDQADVQ SDKTSLLSYAINFGAYIEGSDNSILYAWKGLMGGYPGLFALVPYQEKLSEYRSLENRDLWEYRLNLTQAETARMVEHVWE LKQIQFDYFFFDENCSYRLLELLQVARPSLRLTEQFPLTAIPTDTVKAVKEAGLVEHIEYRPSRERELLSRAEPLSGEEQ DWVLKVSADQQQLQDPAFKALPRDRQALIVDAAYRLERYRANGQERDPLRAQRSFELLRAINKNPAPELQIPQPGLPEDG HESRTWQAGLGTRGDRAFGEYGLRMAYHDLNDNAESFPLGAQIEILQMKLRQYEGNHWQFQQLDLATIRSLTPRNALLQP LSWQVTGGLERVPGKHDDETLVSHVNGGGGGTWALADDVLGFALGTVRVEHNNDFAEFVSPAGGFNTGVLWKNPLGNLSL EAKGDYFFNGEVRRSLSLNQQWELSRNLGLRLSAQREFSHLATPETEVMLEVKWYHY
Sequences:
>Translated_617_residues MLKRLAWLALCVCAPLSAAPHIDPQRLQQLANDRFWISLGHYETAKLGGWRSYVSDKKFFLAPDGNEHPDHELAATVQAL YAPASLGEQHAQCVYPARTRWLKDQLNLTDLPTPDCAEFKKWFKDVSPHSAVMIFPAAYLNSPSSMFGHTLLRIDQADVQ SDKTSLLSYAINFGAYIEGSDNSILYAWKGLMGGYPGLFALVPYQEKLSEYRSLENRDLWEYRLNLTQAETARMVEHVWE LKQIQFDYFFFDENCSYRLLELLQVARPSLRLTEQFPLTAIPTDTVKAVKEAGLVEHIEYRPSRERELLSRAEPLSGEEQ DWVLKVSADQQQLQDPAFKALPRDRQALIVDAAYRLERYRANGQERDPLRAQRSFELLRAINKNPAPELQIPQPGLPEDG HESRTWQAGLGTRGDRAFGEYGLRMAYHDLNDNAESFPLGAQIEILQMKLRQYEGNHWQFQQLDLATIRSLTPRNALLQP LSWQVTGGLERVPGKHDDETLVSHVNGGGGGTWALADDVLGFALGTVRVEHNNDFAEFVSPAGGFNTGVLWKNPLGNLSL EAKGDYFFNGEVRRSLSLNQQWELSRNLGLRLSAQREFSHLATPETEVMLEVKWYHY >Mature_617_residues MLKRLAWLALCVCAPLSAAPHIDPQRLQQLANDRFWISLGHYETAKLGGWRSYVSDKKFFLAPDGNEHPDHELAATVQAL YAPASLGEQHAQCVYPARTRWLKDQLNLTDLPTPDCAEFKKWFKDVSPHSAVMIFPAAYLNSPSSMFGHTLLRIDQADVQ SDKTSLLSYAINFGAYIEGSDNSILYAWKGLMGGYPGLFALVPYQEKLSEYRSLENRDLWEYRLNLTQAETARMVEHVWE LKQIQFDYFFFDENCSYRLLELLQVARPSLRLTEQFPLTAIPTDTVKAVKEAGLVEHIEYRPSRERELLSRAEPLSGEEQ DWVLKVSADQQQLQDPAFKALPRDRQALIVDAAYRLERYRANGQERDPLRAQRSFELLRAINKNPAPELQIPQPGLPEDG HESRTWQAGLGTRGDRAFGEYGLRMAYHDLNDNAESFPLGAQIEILQMKLRQYEGNHWQFQQLDLATIRSLTPRNALLQP LSWQVTGGLERVPGKHDDETLVSHVNGGGGGTWALADDVLGFALGTVRVEHNNDFAEFVSPAGGFNTGVLWKNPLGNLSL EAKGDYFFNGEVRRSLSLNQQWELSRNLGLRLSAQREFSHLATPETEVMLEVKWYHY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70162; Mature: 70162
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRLAWLALCVCAPLSAAPHIDPQRLQQLANDRFWISLGHYETAKLGGWRSYVSDKKFF CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEECCCCHHHCCCHHHHHCCCEEE LAPDGNEHPDHELAATVQALYAPASLGEQHAQCVYPARTRWLKDQLNLTDLPTPDCAEFK ECCCCCCCCCHHHHHHHHHHHCCHHHCCHHHHEECHHHHHHHHHCCCCCCCCCCCHHHHH KWFKDVSPHSAVMIFPAAYLNSPSSMFGHTLLRIDQADVQSDKTSLLSYAINFGAYIEGS HHHHCCCCCCEEEEEEHHHHCCCHHHHHHHHEEECHHHHCHHHHHHHHHHHHCCEEEECC DNSILYAWKGLMGGYPGLFALVPYQEKLSEYRSLENRDLWEYRLNLTQAETARMVEHVWE CCCEEEEEHHHCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHH LKQIQFDYFFFDENCSYRLLELLQVARPSLRLTEQFPLTAIPTDTVKAVKEAGLVEHIEY HHHEEEEEEEECCCCCHHHHHHHHHHCCCCEECCCCCCEECCHHHHHHHHHCCHHHHHHC RPSRERELLSRAEPLSGEEQDWVLKVSADQQQLQDPAFKALPRDRQALIVDAAYRLERYR CCCHHHHHHHHCCCCCCCCCCEEEEECCCHHHHCCHHHHHCCCCCCEEEEHHHHHHHHHH ANGQERDPLRAQRSFELLRAINKNPAPELQIPQPGLPEDGHESRTWQAGLGTRGDRAFGE CCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCEECCCCCCCCHHHHH YGLRMAYHDLNDNAESFPLGAQIEILQMKLRQYEGNHWQFQQLDLATIRSLTPRNALLQP HCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCHHHHHCC LSWQVTGGLERVPGKHDDETLVSHVNGGGGGTWALADDVLGFALGTVRVEHNNDFAEFVS CCEEECCCHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCCCHHHHCC PAGGFNTGVLWKNPLGNLSLEAKGDYFFNGEVRRSLSLNQQWELSRNLGLRLSAQREFSH CCCCCCCCCEEECCCCCEEEEECCCEEECCHHHCCCCCCCCHHHHCCCCCEEECHHHHHH LATPETEVMLEVKWYHY HCCCCCEEEEEEEEECC >Mature Secondary Structure MLKRLAWLALCVCAPLSAAPHIDPQRLQQLANDRFWISLGHYETAKLGGWRSYVSDKKFF CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEECCCCHHHCCCHHHHHCCCEEE LAPDGNEHPDHELAATVQALYAPASLGEQHAQCVYPARTRWLKDQLNLTDLPTPDCAEFK ECCCCCCCCCHHHHHHHHHHHCCHHHCCHHHHEECHHHHHHHHHCCCCCCCCCCCHHHHH KWFKDVSPHSAVMIFPAAYLNSPSSMFGHTLLRIDQADVQSDKTSLLSYAINFGAYIEGS HHHHCCCCCCEEEEEEHHHHCCCHHHHHHHHEEECHHHHCHHHHHHHHHHHHCCEEEECC DNSILYAWKGLMGGYPGLFALVPYQEKLSEYRSLENRDLWEYRLNLTQAETARMVEHVWE CCCEEEEEHHHCCCCCCCEEECCCHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHH LKQIQFDYFFFDENCSYRLLELLQVARPSLRLTEQFPLTAIPTDTVKAVKEAGLVEHIEY HHHEEEEEEEECCCCCHHHHHHHHHHCCCCEECCCCCCEECCHHHHHHHHHCCHHHHHHC RPSRERELLSRAEPLSGEEQDWVLKVSADQQQLQDPAFKALPRDRQALIVDAAYRLERYR CCCHHHHHHHHCCCCCCCCCCEEEEECCCHHHHCCHHHHHCCCCCCEEEEHHHHHHHHHH ANGQERDPLRAQRSFELLRAINKNPAPELQIPQPGLPEDGHESRTWQAGLGTRGDRAFGE CCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCEECCCCCCCCHHHHH YGLRMAYHDLNDNAESFPLGAQIEILQMKLRQYEGNHWQFQQLDLATIRSLTPRNALLQP HCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCHHHHHCC LSWQVTGGLERVPGKHDDETLVSHVNGGGGGTWALADDVLGFALGTVRVEHNNDFAEFVS CCEEECCCHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCCCHHHHCC PAGGFNTGVLWKNPLGNLSLEAKGDYFFNGEVRRSLSLNQQWELSRNLGLRLSAQREFSH CCCCCCCCCEEECCCCCEEEEECCCEEECCHHHCCCCCCCCHHHHCCCCCEEECHHHHHH LATPETEVMLEVKWYHY HCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA