| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461088
Identifier: 77461088
GI number: 77461088
Start: 5483971
End: 5485800
Strand: Direct
Name: 77461088
Synonym: Pfl01_4867
Alternate gene names: NA
Gene position: 5483971-5485800 (Clockwise)
Preceding gene: 77461084
Following gene: 77461091
Centisome position: 85.18
GC content: 59.4
Gene sequence:
>1830_bases ATGGATGTGCGATTGCCGATAACGACTGCCGGAATTTGTCTCGCCATATTGCTTGGCGGGTGTTCGCCCGGCGATGAAAA ACCCGCCGTCAGCCTCGAAGAAAAGACTGCGCGGTTCGAGCAATCGCTGGACGCCATCACCGACCCGAAACTCAAGGACG CCGTGACCGAACTCGGCGGTTCGCTGCTGTTGCTTGAACGCGCACAACAGAAGCTCGACAACAAACCGCCCCGCACCGAA TACGGCGAGGACGCTCTCGGCGTGCTCAGGCATTACCCAACACCCCAGGCGCTGGTCGACACGTTCATCAATGGCCTGTT CGTGCTGCACAAGGACTCCAGTTCCGATTACCTCACCGACCTGCAGCCGGTGTTCCCCTTCGTGCTCAACATCCCCGGCG GTTTTCTGTTCCCCCATGGCGTGGAATGGCATTCGGTGACCCTGAGCAACAAACGGATCATCGCCTATCAGCCGGAATGG TCGGAGACCGATCCGGGCATTCAGTTGAGTCCGTCCAGCTCCAACGTCACCAACCCCGATGACCTGACCGTCACCTACCC GTTCATCGAAGGGCTGAATGTCGACAAGAAGAACCTGCCGCGCCCGGTCAGCCTGCAAGGCCAGGTGGAAGTCATCGCCC CGAAACGCCTGCACAGTTTCAACCTGGACAAAAAGGACGTCGGCCAGACCCGCTCCGACGGCAACCTCAGCGTGACCCTG CTGAAACTGGACACGCACTACGCCGAACTCGAGTTCAGCAACCAGCTGCCGCTCGCCCCGGAAGTCGCCAACACCCGGCT CAATCCGTTGATCGTTCAGGCCCGCGACTCGACGGGCCAATATCTGGTGCGTGCCGGCGCCATCAACGAAAACCCCGAGC AGGTGGCGTTCTATCAAAAGCAGTTGGCGTACCTGCAGCAGCAAAAAGCCTGGAGCGAGGCGCTGGAAAAAAAGCTGGAC GATGAACAACAGGCCTTTGAGCAACAGCATCCGCACCACTACAACAAGGTGTACTTCAACGGCCCGATCGACACCCTCGA AGTCAGCCTGCTGGATTTTTCCGAGGCGACCGTCACCCGCAAGGCGCTGGACCTGCCGGTGCGCGAATTCGATCCGCATA CCACGGAAAAAGCCGTGCAGCCGCTCGACCTGCCGATCACTGTCTACGACGATCAGGCTCCCGAATGGCTCAAAGGCGCG TCCCTGACTGAAGAACAGCTGAAAAGCGGCGTTCATATCCGCCAGTCGGTTGAAGAACCAAGCGCCGCGCGCATCGAATT CGACCACCGCAAAACCTTCAATGATGAAATGCTCGGCGACGACTTCAGCCCCGGCGAAAGCCCGGTGACGTTCTTCACTG AAAAGCACAACGGCAAACTCGACGAGCCCATCGAGCTGCCGCCCGAGGCATACCAGGTCGATCCACTACAGGCGACCATC ACCTACGACCTGAACCTGTTCCCGGAAACCCCGGCGATTGCCGTCGGCTCGATGCCGTTGTTCCTGGCCACGGTGGACAA ACAGGCTTATGAAGCCAAGGCCCTGCCCAAAGGTCTGGAAATCAGGAACAACGCGTTGGTGGTGGATTTGAAGCGATACC CGGCCAACGAATGGCGCTTCTTCGTCAAGGACGACAGCGGTCATTACCTGAAGCAGATTCTGTCGGTCAGCCACGACGCG AGCGCGGAAGGGCCGGCGTTATTCGGCGTGCATTATTTCTATGGCCGTCCGACGCACGTGGAAACCTACCAGCGAACCGA CCTCGCCACCGTGCAATACGGCTTTGAGGTCAAACTCGACAAGGCGCAGACCCAGGGCGCTGCACCCTGA
Upstream 100 bases:
>100_bases AAACCGCCCGGAAATCCGCCACCTGCGTGTGTGTGTCAAAGTTTTTCTGCTAGTGTCCAAACCATTGACAGCCCAGCGAC AGTGGACAGGACGACTGGAA
Downstream 100 bases:
>100_bases TCGGCGCTGATGATCGGCACTCTAGTGATCGAAAGTGCCGATACTGCGTCCGCGCCCACCGTTGATCTGCCGCAACTGCG CCTGCAGATGCAACGACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 609; Mature: 609
Protein sequence:
>609_residues MDVRLPITTAGICLAILLGGCSPGDEKPAVSLEEKTARFEQSLDAITDPKLKDAVTELGGSLLLLERAQQKLDNKPPRTE YGEDALGVLRHYPTPQALVDTFINGLFVLHKDSSSDYLTDLQPVFPFVLNIPGGFLFPHGVEWHSVTLSNKRIIAYQPEW SETDPGIQLSPSSSNVTNPDDLTVTYPFIEGLNVDKKNLPRPVSLQGQVEVIAPKRLHSFNLDKKDVGQTRSDGNLSVTL LKLDTHYAELEFSNQLPLAPEVANTRLNPLIVQARDSTGQYLVRAGAINENPEQVAFYQKQLAYLQQQKAWSEALEKKLD DEQQAFEQQHPHHYNKVYFNGPIDTLEVSLLDFSEATVTRKALDLPVREFDPHTTEKAVQPLDLPITVYDDQAPEWLKGA SLTEEQLKSGVHIRQSVEEPSAARIEFDHRKTFNDEMLGDDFSPGESPVTFFTEKHNGKLDEPIELPPEAYQVDPLQATI TYDLNLFPETPAIAVGSMPLFLATVDKQAYEAKALPKGLEIRNNALVVDLKRYPANEWRFFVKDDSGHYLKQILSVSHDA SAEGPALFGVHYFYGRPTHVETYQRTDLATVQYGFEVKLDKAQTQGAAP
Sequences:
>Translated_609_residues MDVRLPITTAGICLAILLGGCSPGDEKPAVSLEEKTARFEQSLDAITDPKLKDAVTELGGSLLLLERAQQKLDNKPPRTE YGEDALGVLRHYPTPQALVDTFINGLFVLHKDSSSDYLTDLQPVFPFVLNIPGGFLFPHGVEWHSVTLSNKRIIAYQPEW SETDPGIQLSPSSSNVTNPDDLTVTYPFIEGLNVDKKNLPRPVSLQGQVEVIAPKRLHSFNLDKKDVGQTRSDGNLSVTL LKLDTHYAELEFSNQLPLAPEVANTRLNPLIVQARDSTGQYLVRAGAINENPEQVAFYQKQLAYLQQQKAWSEALEKKLD DEQQAFEQQHPHHYNKVYFNGPIDTLEVSLLDFSEATVTRKALDLPVREFDPHTTEKAVQPLDLPITVYDDQAPEWLKGA SLTEEQLKSGVHIRQSVEEPSAARIEFDHRKTFNDEMLGDDFSPGESPVTFFTEKHNGKLDEPIELPPEAYQVDPLQATI TYDLNLFPETPAIAVGSMPLFLATVDKQAYEAKALPKGLEIRNNALVVDLKRYPANEWRFFVKDDSGHYLKQILSVSHDA SAEGPALFGVHYFYGRPTHVETYQRTDLATVQYGFEVKLDKAQTQGAAP >Mature_609_residues MDVRLPITTAGICLAILLGGCSPGDEKPAVSLEEKTARFEQSLDAITDPKLKDAVTELGGSLLLLERAQQKLDNKPPRTE YGEDALGVLRHYPTPQALVDTFINGLFVLHKDSSSDYLTDLQPVFPFVLNIPGGFLFPHGVEWHSVTLSNKRIIAYQPEW SETDPGIQLSPSSSNVTNPDDLTVTYPFIEGLNVDKKNLPRPVSLQGQVEVIAPKRLHSFNLDKKDVGQTRSDGNLSVTL LKLDTHYAELEFSNQLPLAPEVANTRLNPLIVQARDSTGQYLVRAGAINENPEQVAFYQKQLAYLQQQKAWSEALEKKLD DEQQAFEQQHPHHYNKVYFNGPIDTLEVSLLDFSEATVTRKALDLPVREFDPHTTEKAVQPLDLPITVYDDQAPEWLKGA SLTEEQLKSGVHIRQSVEEPSAARIEFDHRKTFNDEMLGDDFSPGESPVTFFTEKHNGKLDEPIELPPEAYQVDPLQATI TYDLNLFPETPAIAVGSMPLFLATVDKQAYEAKALPKGLEIRNNALVVDLKRYPANEWRFFVKDDSGHYLKQILSVSHDA SAEGPALFGVHYFYGRPTHVETYQRTDLATVQYGFEVKLDKAQTQGAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68053; Mature: 68053
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVRLPITTAGICLAILLGGCSPGDEKPAVSLEEKTARFEQSLDAITDPKLKDAVTELGG CCEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC SLLLLERAQQKLDNKPPRTEYGEDALGVLRHYPTPQALVDTFINGLFVLHKDSSSDYLTD CEEEHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCCHHHH LQPVFPFVLNIPGGFLFPHGVEWHSVTLSNKRIIAYQPEWSETDPGIQLSPSSSNVTNPD HHHHHHHEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCEEECCCCCCCCCCC DLTVTYPFIEGLNVDKKNLPRPVSLQGQVEVIAPKRLHSFNLDKKDVGQTRSDGNLSVTL CEEEEEHHHCCCCCCHHCCCCCCCCCCCEEEECCCHHHCCCCCHHHCCCCCCCCCEEEEE LKLDTHYAELEFSNQLPLAPEVANTRLNPLIVQARDSTGQYLVRAGAINENPEQVAFYQK EEEECCEEEEEECCCCCCCCHHHCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHH QLAYLQQQKAWSEALEKKLDDEQQAFEQQHPHHYNKVYFNGPIDTLEVSLLDFSEATVTR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCHHHHHH KALDLPVREFDPHTTEKAVQPLDLPITVYDDQAPEWLKGASLTEEQLKSGVHIRQSVEEP HHHCCCHHHCCCCCHHHHCCCCCCEEEEECCCCCHHHCCCCCCHHHHHCCCHHHHHCCCC SAARIEFDHRKTFNDEMLGDDFSPGESPVTFFTEKHNGKLDEPIELPPEAYQVDPLQATI CCEEEEECCCCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCEEEEE TYDLNLFPETPAIAVGSMPLFLATVDKQAYEAKALPKGLEIRNNALVVDLKRYPANEWRF EEEEEECCCCCCEEECCCCEEEEECCHHHHHHHCCCCCCEECCCEEEEEEECCCCCCCEE FVKDDSGHYLKQILSVSHDASAEGPALFGVHYFYGRPTHVETYQRTDLATVQYGFEVKLD EEECCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHCCCCEEEEEECEEEEEE KAQTQGAAP CCCCCCCCC >Mature Secondary Structure MDVRLPITTAGICLAILLGGCSPGDEKPAVSLEEKTARFEQSLDAITDPKLKDAVTELGG CCEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCC SLLLLERAQQKLDNKPPRTEYGEDALGVLRHYPTPQALVDTFINGLFVLHKDSSSDYLTD CEEEHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCCHHHH LQPVFPFVLNIPGGFLFPHGVEWHSVTLSNKRIIAYQPEWSETDPGIQLSPSSSNVTNPD HHHHHHHEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCEEECCCCCCCCCCC DLTVTYPFIEGLNVDKKNLPRPVSLQGQVEVIAPKRLHSFNLDKKDVGQTRSDGNLSVTL CEEEEEHHHCCCCCCHHCCCCCCCCCCCEEEECCCHHHCCCCCHHHCCCCCCCCCEEEEE LKLDTHYAELEFSNQLPLAPEVANTRLNPLIVQARDSTGQYLVRAGAINENPEQVAFYQK EEEECCEEEEEECCCCCCCCHHHCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHH QLAYLQQQKAWSEALEKKLDDEQQAFEQQHPHHYNKVYFNGPIDTLEVSLLDFSEATVTR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCHHHHHH KALDLPVREFDPHTTEKAVQPLDLPITVYDDQAPEWLKGASLTEEQLKSGVHIRQSVEEP HHHCCCHHHCCCCCHHHHCCCCCCEEEEECCCCCHHHCCCCCCHHHHHCCCHHHHHCCCC SAARIEFDHRKTFNDEMLGDDFSPGESPVTFFTEKHNGKLDEPIELPPEAYQVDPLQATI CCEEEEECCCCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCEEEEE TYDLNLFPETPAIAVGSMPLFLATVDKQAYEAKALPKGLEIRNNALVVDLKRYPANEWRF EEEEEECCCCCCEEECCCCEEEEECCHHHHHHHCCCCCCEECCCEEEEEEECCCCCCCEE FVKDDSGHYLKQILSVSHDASAEGPALFGVHYFYGRPTHVETYQRTDLATVQYGFEVKLD EEECCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHCCCCEEEEEECEEEEEE KAQTQGAAP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA