| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is phnA [H]
Identifier: 77461083
GI number: 77461083
Start: 5481279
End: 5481620
Strand: Direct
Name: phnA [H]
Synonym: Pfl01_4862
Alternate gene names: 77461083
Gene position: 5481279-5481620 (Clockwise)
Preceding gene: 77461082
Following gene: 77461084
Centisome position: 85.13
GC content: 57.6
Gene sequence:
>342_bases GTGAGCACGTTGCCACCCTGCCCGAAATGCAATTCCGAATACACCTACGAAGACGGCACCCAACTGGTGTGCCCGGAGTG CGCCCACGAGTGGTCTGCCGGCGGTGAAGCCGAAGTGACGTCCGATGATGCCGTGAAGAAAGATTCGGTCGGTAACGTCC TGCAAGACGGCGACACCATCACCGTGATCAAGGACCTGAAGGTCAAAGGCACCTCGCTGGTGGTCAAGGTCGGCACCAAG GTCAAGAACATCCGCCTGTGCGATGGCGATCACGACATCGACTGCAAGATCGACGGCATCGGCCCGATGAAACTCAAATC CGAGTTCGTCAGAAAAGTCTGA
Upstream 100 bases:
>100_bases CAGCCTCCGTTGGAGCCTGCGGTTTTTTGTTGCCTGCCATCAGCGGTTAAAACCCTATACAATGTGCGACTTTTAGCGAT CCCCTCTCCAAGGAGCCTTA
Downstream 100 bases:
>100_bases GTCTGCTGTCTTCCATCCCGCGCCCGCCGTGGGATGGAGCTTCACCCTCCCCCGCAATCCCCAGCAAATCCTCGCGATAG CCAAACGCCAGCTGTTTTGA
Product: PhnA protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MSTLPPCPKCNSEYTYEDGTQLVCPECAHEWSAGGEAEVTSDDAVKKDSVGNVLQDGDTITVIKDLKVKGTSLVVKVGTK VKNIRLCDGDHDIDCKIDGIGPMKLKSEFVRKV
Sequences:
>Translated_113_residues MSTLPPCPKCNSEYTYEDGTQLVCPECAHEWSAGGEAEVTSDDAVKKDSVGNVLQDGDTITVIKDLKVKGTSLVVKVGTK VKNIRLCDGDHDIDCKIDGIGPMKLKSEFVRKV >Mature_112_residues STLPPCPKCNSEYTYEDGTQLVCPECAHEWSAGGEAEVTSDDAVKKDSVGNVLQDGDTITVIKDLKVKGTSLVVKVGTKV KNIRLCDGDHDIDCKIDGIGPMKLKSEFVRKV
Specific function: Unknown
COG id: COG2824
COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790547, Length=110, Percent_Identity=66.3636363636364, Blast_Score=157, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004624 - InterPro: IPR013988 - InterPro: IPR013987 [H]
Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]
EC number: NA
Molecular weight: Translated: 12214; Mature: 12083
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLPPCPKCNSEYTYEDGTQLVCPECAHEWSAGGEAEVTSDDAVKKDSVGNVLQDGDTI CCCCCCCCCCCCCCEECCCCEEECCHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEE TVIKDLKVKGTSLVVKVGTKVKNIRLCDGDHDIDCKIDGIGPMKLKSEFVRKV EEEECCEECCCEEEEEECCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHHCC >Mature Secondary Structure STLPPCPKCNSEYTYEDGTQLVCPECAHEWSAGGEAEVTSDDAVKKDSVGNVLQDGDTI CCCCCCCCCCCCCEECCCCEEECCHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEE TVIKDLKVKGTSLVVKVGTKVKNIRLCDGDHDIDCKIDGIGPMKLKSEFVRKV EEEECCEECCCEEEEEECCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]