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The map label for this gene is yfiO [C]

Identifier: 77461058

GI number: 77461058

Start: 5456356

End: 5457372

Strand: Direct

Name: yfiO [C]

Synonym: Pfl01_4837

Alternate gene names: 77461058

Gene position: 5456356-5457372 (Clockwise)

Preceding gene: 77461053

Following gene: 77461059

Centisome position: 84.75

GC content: 60.67

Gene sequence:

>1017_bases
ATGCAAGTGAAACACCTGCTGCTGATCGCCATCCTCGCATTGACCGCTGCTTGCTCATCGAAGGAAGTCGTAGACGAAAA
CCTGAGTGAAGCCGAGCTGTACCAGCAGGCTCAACAGGACCTGGACAACAACAGCTACACCAGCGCCACAGCCAAGCTGA
AGGCTCTGGAGTCGCGTTACCCGTTCGGTCGCTATGCCGATCAGGCGCAGCTGGAACTGATCTATGCCAACTACAAGAAC
GCCGAGCCGGAAGCTGCAAAATCCGCTGCCGAGCGTTTCATTCGTCTGCACCCGCAGCACCCGAACGTCGATTACGCCTA
CTACCTGAAGGGCCTGACCTCGTTCGACCAAGACGTCGGCCTGCTGGCGCGCTTCCTGCCGCTGGACATGACCAAGCGTG
ACCCGGGTGCCGCCCGCGACTCCTACAATGAGTTCGCCCAGCTGACCAGCCGCTACCCGAACAGCCGCTACGCGCCGGAC
GCCAAGCAGCGCATGATCTATCTGCGCAACCTGCTGGCCGCCTACGAAATCCACGTGGCCGACTACTACCTGACCCGTCA
GGCCTATGTCGCCGCTGCCAACCGTGGTCGTTATGTAGTGGAAAACTTCCAGGAAACCCCATCGGTCGGTGACGGCCTGG
CGGTGATGACCGAAGCCTACCAGCGCCTGCATCTGGACGAACTGGCGGCCACCAGCCTGGAAACCCTGAAGCTCAACTAC
CCGAATCACCCGAGCCTGCAGGACGGTCAGTTCGTGCCTCGCGTTGCCGAAGCCGACAACCGTTCATTCCTGAGCAAGGC
CACTCTGGGCCTGATCGAATCCCGTCCGCCGCTGCCGCCGGGAGAGACCCGCGCCAACCAGGACGTGCAGAAGCAGTTCC
AGGACGCGAAAGACGCGATCCCGAACGAGCTCAAGCCGAAAGACGAAAACGGCGACGTGATCGAAGAGCCGGAACCAGAG
TCGAGCGACAGCGACCGTTCCATCTTCAGTTACATGACCTTCGGTCTGTTCGACTGA

Upstream 100 bases:

>100_bases
TAAATACGGCGTCTTTTGCCCCGGGGCTTTTCAACGGGGCGCTCATCATAACAGGACGGCCCCGCCCAAGACAGCGGCCG
TCATAGGGACGCAAGCCGCC

Downstream 100 bases:

>100_bases
TCACTTCGGTGATGCCAAAAAGGGAGATCTTCGGATCTCCCTTTTTATTGCCGCGCGTGATTGGGCTGTGCGCTTGTCGG
GTCCTTGGCTAAACTGCCGG

Product: competence lipoprotein ComL

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MQVKHLLLIAILALTAACSSKEVVDENLSEAELYQQAQQDLDNNSYTSATAKLKALESRYPFGRYADQAQLELIYANYKN
AEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPD
AKQRMIYLRNLLAAYEIHVADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNY
PNHPSLQDGQFVPRVAEADNRSFLSKATLGLIESRPPLPPGETRANQDVQKQFQDAKDAIPNELKPKDENGDVIEEPEPE
SSDSDRSIFSYMTFGLFD

Sequences:

>Translated_338_residues
MQVKHLLLIAILALTAACSSKEVVDENLSEAELYQQAQQDLDNNSYTSATAKLKALESRYPFGRYADQAQLELIYANYKN
AEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPD
AKQRMIYLRNLLAAYEIHVADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNY
PNHPSLQDGQFVPRVAEADNRSFLSKATLGLIESRPPLPPGETRANQDVQKQFQDAKDAIPNELKPKDENGDVIEEPEPE
SSDSDRSIFSYMTFGLFD
>Mature_338_residues
MQVKHLLLIAILALTAACSSKEVVDENLSEAELYQQAQQDLDNNSYTSATAKLKALESRYPFGRYADQAQLELIYANYKN
AEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVGLLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPD
AKQRMIYLRNLLAAYEIHVADYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNY
PNHPSLQDGQFVPRVAEADNRSFLSKATLGLIESRPPLPPGETRANQDVQKQFQDAKDAIPNELKPKDENGDVIEEPEPE
SSDSDRSIFSYMTFGLFD

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=243, Percent_Identity=41.1522633744856, Blast_Score=186, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38123; Mature: 38123

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVKHLLLIAILALTAACSSKEVVDENLSEAELYQQAQQDLDNNSYTSATAKLKALESRY
CCHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVG
CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHH
LLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLAAYEIHVA
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNY
HHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECC
PNHPSLQDGQFVPRVAEADNRSFLSKATLGLIESRPPLPPGETRANQDVQKQFQDAKDAI
CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC
PNELKPKDENGDVIEEPEPESSDSDRSIFSYMTFGLFD
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MQVKHLLLIAILALTAACSSKEVVDENLSEAELYQQAQQDLDNNSYTSATAKLKALESRY
CCHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVG
CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHH
LLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLAAYEIHVA
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLNY
HHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECC
PNHPSLQDGQFVPRVAEADNRSFLSKATLGLIESRPPLPPGETRANQDVQKQFQDAKDAI
CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC
PNELKPKDENGDVIEEPEPESSDSDRSIFSYMTFGLFD
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8097014; 10984043 [H]