| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461053
Identifier: 77461053
GI number: 77461053
Start: 5448845
End: 5449252
Strand: Direct
Name: 77461053
Synonym: Pfl01_4832
Alternate gene names: NA
Gene position: 5448845-5449252 (Clockwise)
Preceding gene: 77461052
Following gene: 77461058
Centisome position: 84.63
GC content: 58.33
Gene sequence:
>408_bases ATGTCCCGTACTTCGAAAATCGGCAAAAACTCCCTTGGCCTGGTCGGTGCCGTACTGGCTGGCGGCCTGATGCTGTCCGG CTCGGTATTCGCCGCGCAACCGCTGGCCCAGGGCTACATGGTCGCTTCGGCCGAGACCTCGGTGAAAACCCCGGAAGGCA AATGCGGTGAAGGCAAATGCGGCGATGCGTCGATGGCCAAGACCGACACCGATGGCGACGGCAAGGTTTCGCGCGCCGAG TTTCTGAAAGTTGCTCCGAAGTCCGACTTCGACAAGATCGACACCAACCACGACGGTTTCATCGACGAGCAAGAGGCGTA CAACAACGTCAAAGCCAACTTCGAAGCCAACGGCAAGAAAATGCCCAAAGGTCTGTTCGAACACCTGAAAGACCAGGACG GTGCCTGA
Upstream 100 bases:
>100_bases GCGATACACCGCCAAAGCTTAATGGCCACACCCGAGCACACCTGCTCCGGCTTGATCGCCCTTAACGTGTGGTTGCGCTG TGCAACCGAAGGAGAATGCA
Downstream 100 bases:
>100_bases TTTCTCAGCCTGCCCGATAAAACAAAGCCGCGCTTTCTCTGACGAGAAGCGCGGCTTTTTCACGCCTGCACGATTACAGC TGGAAGCGTCGCACCATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSRTSKIGKNSLGLVGAVLAGGLMLSGSVFAAQPLAQGYMVASAETSVKTPEGKCGEGKCGDASMAKTDTDGDGKVSRAE FLKVAPKSDFDKIDTNHDGFIDEQEAYNNVKANFEANGKKMPKGLFEHLKDQDGA
Sequences:
>Translated_135_residues MSRTSKIGKNSLGLVGAVLAGGLMLSGSVFAAQPLAQGYMVASAETSVKTPEGKCGEGKCGDASMAKTDTDGDGKVSRAE FLKVAPKSDFDKIDTNHDGFIDEQEAYNNVKANFEANGKKMPKGLFEHLKDQDGA >Mature_134_residues SRTSKIGKNSLGLVGAVLAGGLMLSGSVFAAQPLAQGYMVASAETSVKTPEGKCGEGKCGDASMAKTDTDGDGKVSRAEF LKVAPKSDFDKIDTNHDGFIDEQEAYNNVKANFEANGKKMPKGLFEHLKDQDGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14148; Mature: 14017
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTSKIGKNSLGLVGAVLAGGLMLSGSVFAAQPLAQGYMVASAETSVKTPEGKCGEGKC CCCCCCCCCCCHHHHHHHHHCCHHHCCCHHHHCHHHCCEEEECCCCCCCCCCCCCCCCCC GDASMAKTDTDGDGKVSRAEFLKVAPKSDFDKIDTNHDGFIDEQEAYNNVKANFEANGKK CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC MPKGLFEHLKDQDGA CCHHHHHHHHCCCCC >Mature Secondary Structure SRTSKIGKNSLGLVGAVLAGGLMLSGSVFAAQPLAQGYMVASAETSVKTPEGKCGEGKC CCCCCCCCCCHHHHHHHHHCCHHHCCCHHHHCHHHCCEEEECCCCCCCCCCCCCCCCCC GDASMAKTDTDGDGKVSRAEFLKVAPKSDFDKIDTNHDGFIDEQEAYNNVKANFEANGKK CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC MPKGLFEHLKDQDGA CCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA