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The map label for this gene is yfdZ [C]

Identifier: 77461024

GI number: 77461024

Start: 5417448

End: 5418620

Strand: Reverse

Name: yfdZ [C]

Synonym: Pfl01_4803

Alternate gene names: 77461024

Gene position: 5418620-5417448 (Counterclockwise)

Preceding gene: 77461039

Following gene: 77461023

Centisome position: 84.16

GC content: 62.66

Gene sequence:

>1173_bases
ATGGCTCAGCCCTACAGTGCGCGCAGTCGTGCGATCGAACCGTTCCATGTCATGGCGTTGCTGGCGCGGGCCAATGAATT
GCAGGCCGCCGGCCACGACGTGATCCACCTGGAAATCGGCGAACCGGACTTCACTACCGCCGAACCGATCATCCGCGCCG
GCCAGCAAGCCCTGACAGCCGGGAAAACCCGTTACACCGCAGCCCGTGGCATTCCCGAACTGCGCGAGGCGATTTCCGGC
TTCTATCAGACGCGCTACGGCCTGAACATCGATCCGCGCCGGATTCTCATCACCCCCGGTGGTTCCGGCGCGTTACTGCT
GGCCAGCGCGTTGCTGGTGGATCCGGGCAAGCACTGGCTGCTGGCCGACCCCGGCTACCCTTGCAACCGACACTTTCTGC
GTTTGGTCGAAGGCGCGGCGCAGCTTGTGCCGGTTGGCCCGGACGTGCGTTATCAACTGACGCCGGACCTGGTGGCGCGC
CACTGGGATCACGACAGCGTCGGTGCGCTGGTCGCTTCGCCGGCCAACCCGACCGGTACGATTCTGACCCGCGATGAACT
GTCCGGGTTATCCACAGCCATCAAGGCGCGTCACGGGCATCTGGTGGTGGACGAGATCTACCACGGCCTGACTTACGGCA
CCGACGCCGCCAGTGTGCTAGAAGTGGACGACAGCGCCTTTGTCCTCAACAGTTTCTCCAAATATTTCGGCATGACCGGA
TGGCGTCTCGGCTGGCTGGTGGCGCCGGATGCGGCGGTCAGTGAACTGGAAAAACTCGCGCAGAACCTCTATATCAGCGC
GCCGAGCATGGCCCAACATGCGGCGCTGGCCTGTTTCGAACCGGACACCATCGCGATTCTCGAAGAGCGCCGCGCCGAAT
TCGGCCGTCGCCGTGACTTCCTGCTGCCTGCACTGCGCGAACTGGGCTTCAACATCGCAGTTGAACCAGAGGGCGCGTTC
TATTTGTATGCCGATATCAGCCAGTTCGGCGGCGATGCCTTCGCGTTCTGCCGGCATTTCCTTGAAACCGAACATGTCGC
GTTCACGCCGGGGCTGGATTTCGGTCGCTATCAGGCCGGTCATCACGTGCGCTTTGCCTACACGCAAAACCTCCCACGCC
TACAGGAAGCGGTAGAGCGTATCGCCCGTGGCTTGAAGAGCTGGCAAGGCTGA

Upstream 100 bases:

>100_bases
CGTTACAGTCCAGTGTTCTTGTGGCTGTGACCGCTGCGGGTTCTCGCTCGTTCCGGCAGATGGGTAGAATCGTTTCTTTT
CCCTCGTTGAAGGAAGGCCA

Downstream 100 bases:

>100_bases
TGCGCTTTCATCCTCCTCTTGAAGAAGGCCGGTTGATCCGGCGTTACAAGCGTTTTCTCGCCGATATCGAAACCGTTGGC
GGCGAGTTGCTGACCATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MAQPYSARSRAIEPFHVMALLARANELQAAGHDVIHLEIGEPDFTTAEPIIRAGQQALTAGKTRYTAARGIPELREAISG
FYQTRYGLNIDPRRILITPGGSGALLLASALLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDVRYQLTPDLVAR
HWDHDSVGALVASPANPTGTILTRDELSGLSTAIKARHGHLVVDEIYHGLTYGTDAASVLEVDDSAFVLNSFSKYFGMTG
WRLGWLVAPDAAVSELEKLAQNLYISAPSMAQHAALACFEPDTIAILEERRAEFGRRRDFLLPALRELGFNIAVEPEGAF
YLYADISQFGGDAFAFCRHFLETEHVAFTPGLDFGRYQAGHHVRFAYTQNLPRLQEAVERIARGLKSWQG

Sequences:

>Translated_390_residues
MAQPYSARSRAIEPFHVMALLARANELQAAGHDVIHLEIGEPDFTTAEPIIRAGQQALTAGKTRYTAARGIPELREAISG
FYQTRYGLNIDPRRILITPGGSGALLLASALLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDVRYQLTPDLVAR
HWDHDSVGALVASPANPTGTILTRDELSGLSTAIKARHGHLVVDEIYHGLTYGTDAASVLEVDDSAFVLNSFSKYFGMTG
WRLGWLVAPDAAVSELEKLAQNLYISAPSMAQHAALACFEPDTIAILEERRAEFGRRRDFLLPALRELGFNIAVEPEGAF
YLYADISQFGGDAFAFCRHFLETEHVAFTPGLDFGRYQAGHHVRFAYTQNLPRLQEAVERIARGLKSWQG
>Mature_389_residues
AQPYSARSRAIEPFHVMALLARANELQAAGHDVIHLEIGEPDFTTAEPIIRAGQQALTAGKTRYTAARGIPELREAISGF
YQTRYGLNIDPRRILITPGGSGALLLASALLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDVRYQLTPDLVARH
WDHDSVGALVASPANPTGTILTRDELSGLSTAIKARHGHLVVDEIYHGLTYGTDAASVLEVDDSAFVLNSFSKYFGMTGW
RLGWLVAPDAAVSELEKLAQNLYISAPSMAQHAALACFEPDTIAILEERRAEFGRRRDFLLPALRELGFNIAVEPEGAFY
LYADISQFGGDAFAFCRHFLETEHVAFTPGLDFGRYQAGHHVRFAYTQNLPRLQEAVERIARGLKSWQG

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=324, Percent_Identity=27.4691358024691, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI169881279, Length=324, Percent_Identity=27.4691358024691, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI56713254, Length=396, Percent_Identity=23.4848484848485, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI56713256, Length=396, Percent_Identity=23.4848484848485, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI169881281, Length=208, Percent_Identity=25, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI4507369, Length=377, Percent_Identity=23.8726790450928, Blast_Score=79, Evalue=7e-15,
Organism=Escherichia coli, GI1788722, Length=388, Percent_Identity=29.1237113402062, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1786816, Length=362, Percent_Identity=26.7955801104972, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1788627, Length=401, Percent_Identity=24.4389027431421, Blast_Score=79, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI71994476, Length=359, Percent_Identity=24.2339832869081, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71994472, Length=359, Percent_Identity=23.9554317548747, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17567369, Length=293, Percent_Identity=24.2320819112628, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17567663, Length=367, Percent_Identity=23.9782016348774, Blast_Score=80, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322401, Length=387, Percent_Identity=22.7390180878553, Blast_Score=91, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28573069, Length=364, Percent_Identity=23.3516483516484, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24646114, Length=364, Percent_Identity=23.3516483516484, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI28573067, Length=364, Percent_Identity=23.3516483516484, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI28573065, Length=364, Percent_Identity=23.3516483516484, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI18859735, Length=370, Percent_Identity=21.6216216216216, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42855; Mature: 42724

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQPYSARSRAIEPFHVMALLARANELQAAGHDVIHLEIGEPDFTTAEPIIRAGQQALTA
CCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCHHHHHC
GKTRYTAARGIPELREAISGFYQTRYGLNIDPRRILITPGGSGALLLASALLVDPGKHWL
CCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
LADPGYPCNRHFLRLVEGAAQLVPVGPDVRYQLTPDLVARHWDHDSVGALVASPANPTGT
EECCCCCHHHHHHHHHHHHHHEEECCCCCEEEECHHHHHHCCCCCCCCEEEECCCCCCCE
ILTRDELSGLSTAIKARHGHLVVDEIYHGLTYGTDAASVLEVDDSAFVLNSFSKYFGMTG
EEEHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCC
WRLGWLVAPDAAVSELEKLAQNLYISAPSMAQHAALACFEPDTIAILEERRAEFGRRRDF
CEEEEEECCCHHHHHHHHHHHHHEECCCCHHHHHEEEEECCCHHHHHHHHHHHHCCCHHH
LLPALRELGFNIAVEPEGAFYLYADISQFGGDAFAFCRHFLETEHVAFTPGLDFGRYQAG
HHHHHHHCCCEEEECCCCCEEEEEEHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCCCCC
HHVRFAYTQNLPRLQEAVERIARGLKSWQG
CEEEEEECCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AQPYSARSRAIEPFHVMALLARANELQAAGHDVIHLEIGEPDFTTAEPIIRAGQQALTA
CCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCHHHHHC
GKTRYTAARGIPELREAISGFYQTRYGLNIDPRRILITPGGSGALLLASALLVDPGKHWL
CCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEE
LADPGYPCNRHFLRLVEGAAQLVPVGPDVRYQLTPDLVARHWDHDSVGALVASPANPTGT
EECCCCCHHHHHHHHHHHHHHEEECCCCCEEEECHHHHHHCCCCCCCCEEEECCCCCCCE
ILTRDELSGLSTAIKARHGHLVVDEIYHGLTYGTDAASVLEVDDSAFVLNSFSKYFGMTG
EEEHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCC
WRLGWLVAPDAAVSELEKLAQNLYISAPSMAQHAALACFEPDTIAILEERRAEFGRRRDF
CEEEEEECCCHHHHHHHHHHHHHEECCCCHHHHHEEEEECCCHHHHHHHHHHHHCCCHHH
LLPALRELGFNIAVEPEGAFYLYADISQFGGDAFAFCRHFLETEHVAFTPGLDFGRYQAG
HHHHHHHCCCEEEECCCCCEEEEEEHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCCCCC
HHVRFAYTQNLPRLQEAVERIARGLKSWQG
CEEEEEECCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]