Click here to switch to the map view.

The map label for this gene is pqiA [H]

Identifier: 77461003

GI number: 77461003

Start: 5392272

End: 5392931

Strand: Reverse

Name: pqiA [H]

Synonym: Pfl01_4782

Alternate gene names: 77461003

Gene position: 5392931-5392272 (Counterclockwise)

Preceding gene: 77461004

Following gene: 77461002

Centisome position: 83.76

GC content: 55.76

Gene sequence:

>660_bases
ATGTCAGATTCGGTTGACGCCCCAGGGCTGTCAGATTTACCGCTGGATGACTTGGTGGCCTGTCATGAGTGCGATCTGCT
GATGCGCAAGCCCAAGCTTGCTCACGGCGAAAAAGCCCTCTGCCCACGCTGCGGTTACGAACTCTACGCTCATCGTCATA
ACGTGGTGCAGCGCAGTCTTGCCCTGGTCATTGCCGCGCTGTTGCTCTATGTACCGGCGAACTTTTTACCCATCATGCAG
CTCAATGTTCTCGGGCAATCGTCGCAGGACACGGTCTGGAGCGGTGTGATCGGCCTGTTCAACACCGATATGCGCGGTGT
TTCGGTTGTCGTATTCCTTTGCAGCATGGCGATTCCACTGTTGAAACTGTTGTGTCAGTTGATCGTGTTGCTGACGATCC
GTTTCAACATCGGACGCAGTTATGGCCTGCTGCTCTACCGCATTTATCACCACCTCAAAGACTGGGGCATGCTCGAGGTC
TACCTCATGGGCGTCCTGGTCGCGATCGTCAAACTGGCGGACATGGCGGCTATCACCGTGGGCCTCGGTCTGGCATGTTT
CATCGGCTTGTTACTGGTTCAGGTCTGGCTCGAAGTGGTGATGTCACCGCACCAGATCTGGCAGGCGTTATCAGGAGAAG
ATGCCCATGCGGGCGATTGA

Upstream 100 bases:

>100_bases
CGCAGGAAAGTTTTTGCTCGCGTCAGCGAACAAATTTGCACAGTTATTTTCGAATCAGAACACTAGAATAGATCCCAACT
TTTTCGGAGCCAGAGCCCTT

Downstream 100 bases:

>100_bases
TGCGGGCATTCTGATCTGTACCGAATGCCACGAACTGAACAGGCAGGATGCAGACAGCGATGTGCAGACCTGCACCCGAT
GCGGTGCGCTGGTTCACGCC

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSDSVDAPGLSDLPLDDLVACHECDLLMRKPKLAHGEKALCPRCGYELYAHRHNVVQRSLALVIAALLLYVPANFLPIMQ
LNVLGQSSQDTVWSGVIGLFNTDMRGVSVVVFLCSMAIPLLKLLCQLIVLLTIRFNIGRSYGLLLYRIYHHLKDWGMLEV
YLMGVLVAIVKLADMAAITVGLGLACFIGLLLVQVWLEVVMSPHQIWQALSGEDAHAGD

Sequences:

>Translated_219_residues
MSDSVDAPGLSDLPLDDLVACHECDLLMRKPKLAHGEKALCPRCGYELYAHRHNVVQRSLALVIAALLLYVPANFLPIMQ
LNVLGQSSQDTVWSGVIGLFNTDMRGVSVVVFLCSMAIPLLKLLCQLIVLLTIRFNIGRSYGLLLYRIYHHLKDWGMLEV
YLMGVLVAIVKLADMAAITVGLGLACFIGLLLVQVWLEVVMSPHQIWQALSGEDAHAGD
>Mature_218_residues
SDSVDAPGLSDLPLDDLVACHECDLLMRKPKLAHGEKALCPRCGYELYAHRHNVVQRSLALVIAALLLYVPANFLPIMQL
NVLGQSSQDTVWSGVIGLFNTDMRGVSVVVFLCSMAIPLLKLLCQLIVLLTIRFNIGRSYGLLLYRIYHHLKDWGMLEVY
LMGVLVAIVKLADMAAITVGLGLACFIGLLLVQVWLEVVMSPHQIWQALSGEDAHAGD

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=174, Percent_Identity=28.735632183908, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788137, Length=190, Percent_Identity=27.3684210526316, Blast_Score=81, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 24107; Mature: 23976

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSVDAPGLSDLPLDDLVACHECDLLMRKPKLAHGEKALCPRCGYELYAHRHNVVQRSL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ALVIAALLLYVPANFLPIMQLNVLGQSSQDTVWSGVIGLFNTDMRGVSVVVFLCSMAIPL
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKLLCQLIVLLTIRFNIGRSYGLLLYRIYHHLKDWGMLEVYLMGVLVAIVKLADMAAITV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLGLACFIGLLLVQVWLEVVMSPHQIWQALSGEDAHAGD
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SDSVDAPGLSDLPLDDLVACHECDLLMRKPKLAHGEKALCPRCGYELYAHRHNVVQRSL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ALVIAALLLYVPANFLPIMQLNVLGQSSQDTVWSGVIGLFNTDMRGVSVVVFLCSMAIPL
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKLLCQLIVLLTIRFNIGRSYGLLLYRIYHHLKDWGMLEVYLMGVLVAIVKLADMAAITV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLGLACFIGLLLVQVWLEVVMSPHQIWQALSGEDAHAGD
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]