Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is ybeS [C]

Identifier: 77460991

GI number: 77460991

Start: 5378196

End: 5379908

Strand: Direct

Name: ybeS [C]

Synonym: Pfl01_4770

Alternate gene names: 77460991

Gene position: 5378196-5379908 (Clockwise)

Preceding gene: 77460990

Following gene: 77460992

Centisome position: 83.53

GC content: 62.17

Gene sequence:

>1713_bases
ATGGAATGCTGGTCCGTCCTGCAACTGCCCGAAGACGCCGGGCTGCGTGATATCAAGCGCAGCTATGCGCGTCTGCTGAA
AGTCTTTCGGCCCGATGAAGATGCCGCAGGCTTCCAGCGCCTGCGCGAGGCTTATGAACGCGCACTGTCGATTGCCCAGT
GGCGCCTTGAAAACGAAGAGACCGAAGAGCACGACGACGTCATGCTGGCCCCGGGGATCGCCGCGCTGGCGGTACAAGAG
CAGTCCATGGCCCAGCCACTGCAGAAGACCGGGACCGATGCGCGGGATTACCCTGCGGCGCTGTTCGAACCGGTGGCCCC
GGCCGCGCCCGAAGCACCGCTCGAGTCGCAGACCTTGCGGGTACAACCCCTGAACCCGGAGCCCGCGGAGCAGACCGCCG
ACTCGGCCGTTGAAGCCGCGTCGCAATTGCTGGACGGCCTCTCGGACACCAATCTGGACCAGCGCTGGGAGCAAGCGTGC
CAGCAGGACTGTGCGCAAGCGTTCCAGACCCTGTTGCTGACGTTGTGCTTCGATCAGCCCGCCCTGCGCCTTTCGATTGC
CCGTTGGGCGGTACAGCACCTGGGTTGGCTGGGCCCATGGCAGGAGATCGTCATCGGCGACCGGCAGCGCATCATTCTCG
CCAACGAGTTGCTGGCGGATTACCGACAATCGCTGGAAACGCTGCTCGCATCGCAAAACGAGCGCGAATTTCTCGCGCTG
CTCAAGACTTACACGGCCCAACCCTGGCTCCAGGTGTTCGACCGTCGGGAACACTGGCAGCAGATCATCCTGCAACTGCT
GCAGGACACGGAGTGGAGCGTGCCGCTGTTCGACCGCGTCTCCCAATTGTTTGGTTGGGACGACACCAAGGGCATCCATC
CGCAACCGGACTGGCTCTGGCAGGAGATGATCGAGCGCTGCAATCAGGAAAGCCTCTACGACAATCTGTGCGCCCGGGCC
GAAGATCAGCGCAACGGGTCGCCCGATGCGCTGGCCGCACGGATGCTGATCAGCCCGATGAAGCCGCGGCAACAGAAAGA
CATGACCGACCGCTTCATTCCGGCGGACTGGCAGGCCTGCCAGCAGTTGTCGGAAACCCTCAAGTGGCGCTTCCCCGACC
TGCTCGCCCGCCTGCCGTACGCCGACGTCTTCTACTGGCGACGCTTTCTGCCGCGCTACATCGCCGCCGAAACCTGGATG
CAGTCATGGGCGGCGATCGCGCTGGCGCTGTGGCTGTTCTATCTGCCCGCCGAGCATAAAACCACAGCCATGAGCATCGT
CATTCCCCTGGCCTTCGCCTGCGTTCCTGTCTGGTTTTTCCGGATCGGCTTGAGTTATTGGTTTCTGATCAGCGCCCATT
TGATCGTTCAGGATCTGTGGTTGACCGAAAGGATCATTCCACGCCGATGGAACCCTGATACCCGCTGGCTTGTGCTGCGC
CATGGCGTGCCGCAAGCCGTCATGATCCTGCTGTTCTCGGTCATGCTCGGCGGCCTGGGAGCCTTCACCTACATCGGCGT
CATCGTGATCGGGCTTTGGCACAAGCGGCGCATCGGTACGCTCGACCCGGAATTCAGTGACAAACACCCTTGGCTGACCG
CCCTGCACTGGGCGCACTTCAGCCCGTTACAACTGCTGTTTCTGGTGTTCATGACCGGGGTGACTCTTGCGAGTCAGCTT
GGTTATTCGCTGAAACACCTGTTCCCCGGCTAG

Upstream 100 bases:

>100_bases
TGGACTCCCAGGACGAGCGGCAGATCCGTGAAACCCGTACCGAACTGAGCAAGCAATTGAGCGCCCTCGACCGCAGCCCC
TGGCAGTAAGGAAGCACGAC

Downstream 100 bases:

>100_bases
GCTAGACGCGGGCCGGATAGCCCTTCCACCAAGGTATTACCCTCGCTGAAAAGGATCTGAGCATGTTGAAACTCGCAGGC
CTCACCCTCGCGGCGCTCAC

Product: heat shock protein DnaJ-like protein

Products: NA

Alternate protein names: DNAJ Domain-Containing Protein; Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ N-Terminal

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MECWSVLQLPEDAGLRDIKRSYARLLKVFRPDEDAAGFQRLREAYERALSIAQWRLENEETEEHDDVMLAPGIAALAVQE
QSMAQPLQKTGTDARDYPAALFEPVAPAAPEAPLESQTLRVQPLNPEPAEQTADSAVEAASQLLDGLSDTNLDQRWEQAC
QQDCAQAFQTLLLTLCFDQPALRLSIARWAVQHLGWLGPWQEIVIGDRQRIILANELLADYRQSLETLLASQNEREFLAL
LKTYTAQPWLQVFDRREHWQQIILQLLQDTEWSVPLFDRVSQLFGWDDTKGIHPQPDWLWQEMIERCNQESLYDNLCARA
EDQRNGSPDALAARMLISPMKPRQQKDMTDRFIPADWQACQQLSETLKWRFPDLLARLPYADVFYWRRFLPRYIAAETWM
QSWAAIALALWLFYLPAEHKTTAMSIVIPLAFACVPVWFFRIGLSYWFLISAHLIVQDLWLTERIIPRRWNPDTRWLVLR
HGVPQAVMILLFSVMLGGLGAFTYIGVIVIGLWHKRRIGTLDPEFSDKHPWLTALHWAHFSPLQLLFLVFMTGVTLASQL
GYSLKHLFPG

Sequences:

>Translated_570_residues
MECWSVLQLPEDAGLRDIKRSYARLLKVFRPDEDAAGFQRLREAYERALSIAQWRLENEETEEHDDVMLAPGIAALAVQE
QSMAQPLQKTGTDARDYPAALFEPVAPAAPEAPLESQTLRVQPLNPEPAEQTADSAVEAASQLLDGLSDTNLDQRWEQAC
QQDCAQAFQTLLLTLCFDQPALRLSIARWAVQHLGWLGPWQEIVIGDRQRIILANELLADYRQSLETLLASQNEREFLAL
LKTYTAQPWLQVFDRREHWQQIILQLLQDTEWSVPLFDRVSQLFGWDDTKGIHPQPDWLWQEMIERCNQESLYDNLCARA
EDQRNGSPDALAARMLISPMKPRQQKDMTDRFIPADWQACQQLSETLKWRFPDLLARLPYADVFYWRRFLPRYIAAETWM
QSWAAIALALWLFYLPAEHKTTAMSIVIPLAFACVPVWFFRIGLSYWFLISAHLIVQDLWLTERIIPRRWNPDTRWLVLR
HGVPQAVMILLFSVMLGGLGAFTYIGVIVIGLWHKRRIGTLDPEFSDKHPWLTALHWAHFSPLQLLFLVFMTGVTLASQL
GYSLKHLFPG
>Mature_570_residues
MECWSVLQLPEDAGLRDIKRSYARLLKVFRPDEDAAGFQRLREAYERALSIAQWRLENEETEEHDDVMLAPGIAALAVQE
QSMAQPLQKTGTDARDYPAALFEPVAPAAPEAPLESQTLRVQPLNPEPAEQTADSAVEAASQLLDGLSDTNLDQRWEQAC
QQDCAQAFQTLLLTLCFDQPALRLSIARWAVQHLGWLGPWQEIVIGDRQRIILANELLADYRQSLETLLASQNEREFLAL
LKTYTAQPWLQVFDRREHWQQIILQLLQDTEWSVPLFDRVSQLFGWDDTKGIHPQPDWLWQEMIERCNQESLYDNLCARA
EDQRNGSPDALAARMLISPMKPRQQKDMTDRFIPADWQACQQLSETLKWRFPDLLARLPYADVFYWRRFLPRYIAAETWM
QSWAAIALALWLFYLPAEHKTTAMSIVIPLAFACVPVWFFRIGLSYWFLISAHLIVQDLWLTERIIPRRWNPDTRWLVLR
HGVPQAVMILLFSVMLGGLGAFTYIGVIVIGLWHKRRIGTLDPEFSDKHPWLTALHWAHFSPLQLLFLVFMTGVTLASQL
GYSLKHLFPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65826; Mature: 65826

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECWSVLQLPEDAGLRDIKRSYARLLKVFRPDEDAAGFQRLREAYERALSIAQWRLENEE
CCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
TEEHDDVMLAPGIAALAVQEQSMAQPLQKTGTDARDYPAALFEPVAPAAPEAPLESQTLR
CCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEE
VQPLNPEPAEQTADSAVEAASQLLDGLSDTNLDQRWEQACQQDCAQAFQTLLLTLCFDQP
EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ALRLSIARWAVQHLGWLGPWQEIVIGDRQRIILANELLADYRQSLETLLASQNEREFLAL
HHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LKTYTAQPWLQVFDRREHWQQIILQLLQDTEWSVPLFDRVSQLFGWDDTKGIHPQPDWLW
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHH
QEMIERCNQESLYDNLCARAEDQRNGSPDALAARMLISPMKPRQQKDMTDRFIPADWQAC
HHHHHHHCHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHH
QQLSETLKWRFPDLLARLPYADVFYWRRFLPRYIAAETWMQSWAAIALALWLFYLPAEHK
HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TTAMSIVIPLAFACVPVWFFRIGLSYWFLISAHLIVQDLWLTERIIPRRWNPDTRWLVLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
HGVPQAVMILLFSVMLGGLGAFTYIGVIVIGLWHKRRIGTLDPEFSDKHPWLTALHWAHF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC
SPLQLLFLVFMTGVTLASQLGYSLKHLFPG
CHHHHHHHHHHHHHHHHHHHCHHHHHCCCC
>Mature Secondary Structure
MECWSVLQLPEDAGLRDIKRSYARLLKVFRPDEDAAGFQRLREAYERALSIAQWRLENEE
CCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
TEEHDDVMLAPGIAALAVQEQSMAQPLQKTGTDARDYPAALFEPVAPAAPEAPLESQTLR
CCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEE
VQPLNPEPAEQTADSAVEAASQLLDGLSDTNLDQRWEQACQQDCAQAFQTLLLTLCFDQP
EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ALRLSIARWAVQHLGWLGPWQEIVIGDRQRIILANELLADYRQSLETLLASQNEREFLAL
HHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LKTYTAQPWLQVFDRREHWQQIILQLLQDTEWSVPLFDRVSQLFGWDDTKGIHPQPDWLW
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHH
QEMIERCNQESLYDNLCARAEDQRNGSPDALAARMLISPMKPRQQKDMTDRFIPADWQAC
HHHHHHHCHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHH
QQLSETLKWRFPDLLARLPYADVFYWRRFLPRYIAAETWMQSWAAIALALWLFYLPAEHK
HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TTAMSIVIPLAFACVPVWFFRIGLSYWFLISAHLIVQDLWLTERIIPRRWNPDTRWLVLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
HGVPQAVMILLFSVMLGGLGAFTYIGVIVIGLWHKRRIGTLDPEFSDKHPWLTALHWAHF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC
SPLQLLFLVFMTGVTLASQLGYSLKHLFPG
CHHHHHHHHHHHHHHHHHHHCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA