Click here to switch to the map view.

The map label for this gene is petA [H]

Identifier: 77460913

GI number: 77460913

Start: 5294715

End: 5295308

Strand: Reverse

Name: petA [H]

Synonym: Pfl01_4692

Alternate gene names: 77460913

Gene position: 5295308-5294715 (Counterclockwise)

Preceding gene: 77460914

Following gene: 77460912

Centisome position: 82.25

GC content: 58.42

Gene sequence:

>594_bases
ATGAGCAATGACGGCGTGAATGCAGGCCGGCGTCGCTTCTTGGTAGCAGCCACATCCGTGGTGGGTGCTGCAGGAGCGGT
GGGGGCTGCGGTCCCGTTCGTGGGGTCATGGTTTCCCAGTGCCAAGGCGAAAGCTGCCGGAGCACCGGTGAAAGTGAATG
TCAGCAAAATCGAGCCAGGACAGCAGATGATTGCTGAATGGCGCGGCCAGCCGGTGTTCATTGTCCGCCGTACCGAGGAA
ATCCTGGGGAATCTCAAAAAGATCGAAGGCCAACTCTCCGATCCGACCTCCAAAAACTCCACGCAACCCACTTATGTCGA
CCCTGAAGTGCGTTCGATCAAGCCGGAAATCCTCCTGCTGATCGGGATCTGCACTCACCTGGGTTGCTCACCGACCTTCC
GTCCCGAAGTGGCACCCGCGGATCTGGGCAAAGACTGGGTAGGCGGTTATTTCTGCCCTTGCCACGGTTCCCACTACGAT
CTGGCTGGCCGCGTCTACAAGTCGCAACCTGCGCCTTTGAACCTGCCAGTACCCCCGCATTCCTATGAGACCGATGACCT
GATTGTCATTGGCGTCGATACGGAGAAAGCGTGA

Upstream 100 bases:

>100_bases
GGGGTTTTCATTACCATTCGGCAAAATTTTTATAAGTACATAGTTTCAATTTAGTAGACGCCTGATTTAACAGGCCACAA
AGCTGATGGGAGAGGACTGA

Downstream 100 bases:

>100_bases
TGAGCAAGTTCATGGATTGGGTTGATGCACGCTTCCCCGCCACCAAAATGTGGGAAGACCATCTCAGCAAGTATTACGCG
CCAAAAAACTTCAACTTCTT

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSNDGVNAGRRRFLVAATSVVGAAGAVGAAVPFVGSWFPSAKAKAAGAPVKVNVSKIEPGQQMIAEWRGQPVFIVRRTEE
ILGNLKKIEGQLSDPTSKNSTQPTYVDPEVRSIKPEILLLIGICTHLGCSPTFRPEVAPADLGKDWVGGYFCPCHGSHYD
LAGRVYKSQPAPLNLPVPPHSYETDDLIVIGVDTEKA

Sequences:

>Translated_197_residues
MSNDGVNAGRRRFLVAATSVVGAAGAVGAAVPFVGSWFPSAKAKAAGAPVKVNVSKIEPGQQMIAEWRGQPVFIVRRTEE
ILGNLKKIEGQLSDPTSKNSTQPTYVDPEVRSIKPEILLLIGICTHLGCSPTFRPEVAPADLGKDWVGGYFCPCHGSHYD
LAGRVYKSQPAPLNLPVPPHSYETDDLIVIGVDTEKA
>Mature_196_residues
SNDGVNAGRRRFLVAATSVVGAAGAVGAAVPFVGSWFPSAKAKAAGAPVKVNVSKIEPGQQMIAEWRGQPVFIVRRTEEI
LGNLKKIEGQLSDPTSKNSTQPTYVDPEVRSIKPEILLLIGICTHLGCSPTFRPEVAPADLGKDWVGGYFCPCHGSHYDL
AGRVYKSQPAPLNLPVPPHSYETDDLIVIGVDTEKA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=181, Percent_Identity=39.7790055248619, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17540418, Length=156, Percent_Identity=41.025641025641, Blast_Score=107, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6320811, Length=190, Percent_Identity=35.7894736842105, Blast_Score=115, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24580896, Length=162, Percent_Identity=45.0617283950617, Blast_Score=123, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 21018; Mature: 20887

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDGVNAGRRRFLVAATSVVGAAGAVGAAVPFVGSWFPSAKAKAAGAPVKVNVSKIEPG
CCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCH
QQMIAEWRGQPVFIVRRTEEILGNLKKIEGQLSDPTSKNSTQPTYVDPEVRSIKPEILLL
HHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCEECCHHHHCCHHHHHE
IGICTHLGCSPTFRPEVAPADLGKDWVGGYFCPCHGSHYDLAGRVYKSQPAPLNLPVPPH
EEHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCEECCCCCC
SYETDDLIVIGVDTEKA
CCCCCCEEEEEECCCCC
>Mature Secondary Structure 
SNDGVNAGRRRFLVAATSVVGAAGAVGAAVPFVGSWFPSAKAKAAGAPVKVNVSKIEPG
CCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCH
QQMIAEWRGQPVFIVRRTEEILGNLKKIEGQLSDPTSKNSTQPTYVDPEVRSIKPEILLL
HHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCEECCHHHHCCHHHHHE
IGICTHLGCSPTFRPEVAPADLGKDWVGGYFCPCHGSHYDLAGRVYKSQPAPLNLPVPPH
EEHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCEECCCCCC
SYETDDLIVIGVDTEKA
CCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA