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The map label for this gene is petB [H]

Identifier: 77460912

GI number: 77460912

Start: 5293504

End: 5294715

Strand: Reverse

Name: petB [H]

Synonym: Pfl01_4691

Alternate gene names: 77460912

Gene position: 5294715-5293504 (Counterclockwise)

Preceding gene: 77460913

Following gene: 77460911

Centisome position: 82.24

GC content: 57.34

Gene sequence:

>1212_bases
ATGAGCAAGTTCATGGATTGGGTTGATGCACGCTTCCCCGCCACCAAAATGTGGGAAGACCATCTCAGCAAGTATTACGC
GCCAAAAAACTTCAACTTCTTCTATTTCTTCGGCTCGCTGGCGCTGCTCGTTCTGGTCAACCAGATCGTCACCGGCGTCT
GGCTGACCATGAGCTACACCCCGTCGGCGGAAGAAGCGTTCGCTTCCGTCGAATACATCATGCGCGACGTCGAGTACGGT
TCGATCCTGCGCCTGCTGCACTCCACCGGCGCTTCGGCGTTCTTCATCGTGGTCTATCTGCACATGTTCCGTGGCCTGCT
CTACGGTTCGTACCAGAAGCCGCGTGAGCTGGTGTGGGTCTTCGGCATGCTGATCTACCTGGCGCTGATGGCTGAAGCCT
TCATGGGTTACCTGCTGCCGTGGGGCCAGATGTCCTACTGGGGTGCCCAGGTGATCATCTCGCTGTTCGGCGCGATTCCG
GTCATCGGCAACGACCTGACCCAGTGGATCCGTGGTGACTACCTGATTTCCGGAATCACCCTGAACCGCTTCTTCGCCCT
GCACGTGGTTGCGCTGCCTATCGTGATTCTCGGTCTGGTGGTGCTGCACATCCTGGCATTGCACGAAGTCGGTTCGAACA
ACCCGGACGGCGTGGACATCAAGAAGCACAAAGACGAAAACGGTATCCCGCTGGACGGCATCGCCTTCCACCCGTACTAC
ACCGTGAAAGATATCGTCGGCGTTGTGGTGTTCCTGTTCATCTTCTGCTTCATTGTGTTCTTCTTCCCGGAAATGGGCGG
TTACTTCCTCGAAAAACCTAACTTCGAGCAGGCCAACCCGTTCAAGACCCCAGAGCACATTGCACCGGTCTGGTACTTCA
CACCGTTCTACGCAATCTTGCGGGCGGTCCCTGACAAGCTCATGGGCGTTATCGCCATGGGTGCCGCGATTGCGGTGCTG
TTCGTCCTGCCGTGGCTCGACCGCAGCCCGGTCAAGTCGATGCGTTACAAAGGCTGGATGAGCAAGATCTGGCTGGTGGT
GTTCTGCATTTCGTTCGTGATCCTCGGCATTCTGGGCGTTCTGGCCCCGACGCCAGGCCGTACGCTGCTGTCGCAGGTCT
GCACCTTCCTGTACTTCGCCTACTTCATTCTGATGCCGTTCTACACCAGGCTCGAGAAGACCAAACCGGTTCCGGAAAGG
GTGACTGGCTGA

Upstream 100 bases:

>100_bases
TCTACAAGTCGCAACCTGCGCCTTTGAACCTGCCAGTACCCCCGCATTCCTATGAGACCGATGACCTGATTGTCATTGGC
GTCGATACGGAGAAAGCGTG

Downstream 100 bases:

>100_bases
TGAAAAAGTTATTTTTTGCTCTGATTTTTGCTGCTCTGCCAGTGCTGTCTTTCGCGGCCGAACACGGTGGTCCGGAACTG
GAAAAGGTCGACATCGACGT

Product: cytochrome b/b6-like

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MSKFMDWVDARFPATKMWEDHLSKYYAPKNFNFFYFFGSLALLVLVNQIVTGVWLTMSYTPSAEEAFASVEYIMRDVEYG
SILRLLHSTGASAFFIVVYLHMFRGLLYGSYQKPRELVWVFGMLIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIP
VIGNDLTQWIRGDYLISGITLNRFFALHVVALPIVILGLVVLHILALHEVGSNNPDGVDIKKHKDENGIPLDGIAFHPYY
TVKDIVGVVVFLFIFCFIVFFFPEMGGYFLEKPNFEQANPFKTPEHIAPVWYFTPFYAILRAVPDKLMGVIAMGAAIAVL
FVLPWLDRSPVKSMRYKGWMSKIWLVVFCISFVILGILGVLAPTPGRTLLSQVCTFLYFAYFILMPFYTRLEKTKPVPER
VTG

Sequences:

>Translated_403_residues
MSKFMDWVDARFPATKMWEDHLSKYYAPKNFNFFYFFGSLALLVLVNQIVTGVWLTMSYTPSAEEAFASVEYIMRDVEYG
SILRLLHSTGASAFFIVVYLHMFRGLLYGSYQKPRELVWVFGMLIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIP
VIGNDLTQWIRGDYLISGITLNRFFALHVVALPIVILGLVVLHILALHEVGSNNPDGVDIKKHKDENGIPLDGIAFHPYY
TVKDIVGVVVFLFIFCFIVFFFPEMGGYFLEKPNFEQANPFKTPEHIAPVWYFTPFYAILRAVPDKLMGVIAMGAAIAVL
FVLPWLDRSPVKSMRYKGWMSKIWLVVFCISFVILGILGVLAPTPGRTLLSQVCTFLYFAYFILMPFYTRLEKTKPVPER
VTG
>Mature_402_residues
SKFMDWVDARFPATKMWEDHLSKYYAPKNFNFFYFFGSLALLVLVNQIVTGVWLTMSYTPSAEEAFASVEYIMRDVEYGS
ILRLLHSTGASAFFIVVYLHMFRGLLYGSYQKPRELVWVFGMLIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPV
IGNDLTQWIRGDYLISGITLNRFFALHVVALPIVILGLVVLHILALHEVGSNNPDGVDIKKHKDENGIPLDGIAFHPYYT
VKDIVGVVVFLFIFCFIVFFFPEMGGYFLEKPNFEQANPFKTPEHIAPVWYFTPFYAILRAVPDKLMGVIAMGAAIAVLF
VLPWLDRSPVKSMRYKGWMSKIWLVVFCISFVILGILGVLAPTPGRTLLSQVCTFLYFAYFILMPFYTRLEKTKPVPERV
TG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=368, Percent_Identity=44.5652173913043, Blast_Score=266, Evalue=2e-71,
Organism=Saccharomyces cerevisiae, GI6226529, Length=367, Percent_Identity=45.5040871934605, Blast_Score=285, Evalue=9e-78,
Organism=Saccharomyces cerevisiae, GI6226532, Length=241, Percent_Identity=45.643153526971, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6226531, Length=146, Percent_Identity=51.3698630136986, Blast_Score=144, Evalue=3e-35,
Organism=Saccharomyces cerevisiae, GI6226530, Length=137, Percent_Identity=48.1751824817518, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 45992; Mature: 45861

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFMDWVDARFPATKMWEDHLSKYYAPKNFNFFYFFGSLALLVLVNQIVTGVWLTMSYT
CCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECC
PSAEEAFASVEYIMRDVEYGSILRLLHSTGASAFFIVVYLHMFRGLLYGSYQKPRELVWV
CCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
FGMLIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGNDLTQWIRGDYLISGIT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHEECHH
LNRFFALHVVALPIVILGLVVLHILALHEVGSNNPDGVDIKKHKDENGIPLDGIAFHPYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCH
TVKDIVGVVVFLFIFCFIVFFFPEMGGYFLEKPNFEQANPFKTPEHIAPVWYFTPFYAIL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHH
RAVPDKLMGVIAMGAAIAVLFVLPWLDRSPVKSMRYKGWMSKIWLVVFCISFVILGILGV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAPTPGRTLLSQVCTFLYFAYFILMPFYTRLEKTKPVPERVTG
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SKFMDWVDARFPATKMWEDHLSKYYAPKNFNFFYFFGSLALLVLVNQIVTGVWLTMSYT
CHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECC
PSAEEAFASVEYIMRDVEYGSILRLLHSTGASAFFIVVYLHMFRGLLYGSYQKPRELVWV
CCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
FGMLIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGNDLTQWIRGDYLISGIT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHEECHH
LNRFFALHVVALPIVILGLVVLHILALHEVGSNNPDGVDIKKHKDENGIPLDGIAFHPYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCH
TVKDIVGVVVFLFIFCFIVFFFPEMGGYFLEKPNFEQANPFKTPEHIAPVWYFTPFYAIL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHH
RAVPDKLMGVIAMGAAIAVLFVLPWLDRSPVKSMRYKGWMSKIWLVVFCISFVILGILGV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAPTPGRTLLSQVCTFLYFAYFILMPFYTRLEKTKPVPERVTG
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA