| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is murC [H]
Identifier: 77460893
GI number: 77460893
Start: 5273705
End: 5275165
Strand: Reverse
Name: murC [H]
Synonym: Pfl01_4672
Alternate gene names: 77460893
Gene position: 5275165-5273705 (Counterclockwise)
Preceding gene: 77460894
Following gene: 77460892
Centisome position: 81.93
GC content: 63.45
Gene sequence:
>1461_bases ATGGTTGAGAATCAGAAAGCCATGCCGCAACCGGAAATGCGCCGCATCCGTCGCATCCACTTCGTCGGGATCGGCGGCGT GGGCATGTGCGGCATCGCCGAAGTGCTGCTGAACCTGGGCTATGAAGTGTCCGGTTCGGACCTGAAAGCTTCGCCGGTGA CCGAGCGCCTGGAATCCTTCGGTGCGCAGATCTTCATCGGCCACCGTGCCGAGAACGCCGCTGCCGCCGATGTGCTGGTG GTGTCGAGCGCCGTCAACACCTCCAACCCGGAAGTGGCGACCGCACTGGAACGCCGCATCCCGGTGGTGCCGCGTGCCGA AATGCTCGCCGAACTGATGCGCTACCGCCACGGCATCGCCGTCGCCGGTACCCATGGCAAAACCACCACCACCAGCCTGA TCGCTTCGGTGTTCGCGGCGGGTGGCCTGGATCCGACCTTCGTCATCGGTGGCCGTTTGAATGCTGCGGGCACCAATGCC CAGCTCGGCACCAGCCGTTATCTGATTGCCGAAGCCGATGAAAGCGACGCAAGCTTCCTGCATCTGCAGCCGCTGGTGGC TGTGGTCACCAATATCGACGCCGACCACATGGCGACCTACGACGGTGACTTCAACAAACTGAAGAAAACCTTCGTCGAGT TCCTGCACAACCTGCCGTTCTACGGTCTGGCGGTGATGTGCCTGGACGATCCGGTGGTGCGTGAAATCCTGCCGCTGGTC AAGCGTCCGACCGTGACCTATGGCTTCAGCGAAGACGCCGACGTGCGCGCGATCAATGTTCGTCAGCAGGGCATGCAGAC CTTCTTTACCGTGCTGCGCCCTGATCGCGAGCCTCTTGATGTGTCCGTGAACATGCCGGGCAATCACAACGTGCTCAATT CCCTGGCGACCATCTGCATCGCCACCGACGAAGGCGTCAGCGACGAGGCCATCGTCCAGGGCCTGTCCGGCTTCCAGGGT GTCGGCCGACGCTTCCAGGTCTACGGCGAACTGCCGGTGGACGGCGGCAATGTGATGCTGGTCGACGACTACGGTCACCA CCCGACCGAAGTCGCAGCCGTGATCAAAGCCGTGCGCGGTGGCTGGCCGGAGCGCCGTCTGGTGATGGTCTACCAGCCGC ACCGTTACAGCCGCACCCGCGACCTGTACGACGATTTCGTCAATGTCCTGGCCGACGCCAACGTGCTGCTGCTGATGGAA GTCTACCCGGCCGGCGAAGAGCCGATCCCGGGCGCCGACAGCCGCAAGCTGTGCAACAGCATCCGCCAGCGCGGTCAGCT CGACCCGATCTACATCGAGCGCGGCGTCGATCTGGCGCCACTGGTCAAGCCGCTGCTGCGTGCCGGCGACATTCTGCTGT GCCAGGGCGCCGGTGACATCGGCGGTCTCGCACCGAAACTGTTGAAAAGCGAGTTGTTCGCCGGTGCCGTGGCGGCATCG GTCGAGGGGAAGTTGAAATGA
Upstream 100 bases:
>100_bases ATGCAACCGCAACGACTCGAACAAATGGCCCAAGCGGCCCGCCGTCTGGCGAAACCCGAAGCCACCCGTAGCGTGGTCGA TACCTGTCTGGAGGTGGCCC
Downstream 100 bases:
>100_bases CTGCTGCCTACGCCAATCTGTTCTCCACCATCGCCCCGAAGGATTTCGGCCGTGTGGCCGTGTTGTTCGGTGGCCTGAGT GCCGAGCGTGAAGTCTCGCT
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MVENQKAMPQPEMRRIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAQIFIGHRAENAAAADVLV VSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNA QLGTSRYLIAEADESDASFLHLQPLVAVVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPLV KRPTVTYGFSEDADVRAINVRQQGMQTFFTVLRPDREPLDVSVNMPGNHNVLNSLATICIATDEGVSDEAIVQGLSGFQG VGRRFQVYGELPVDGGNVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLLLME VYPAGEEPIPGADSRKLCNSIRQRGQLDPIYIERGVDLAPLVKPLLRAGDILLCQGAGDIGGLAPKLLKSELFAGAVAAS VEGKLK
Sequences:
>Translated_486_residues MVENQKAMPQPEMRRIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAQIFIGHRAENAAAADVLV VSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNA QLGTSRYLIAEADESDASFLHLQPLVAVVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPLV KRPTVTYGFSEDADVRAINVRQQGMQTFFTVLRPDREPLDVSVNMPGNHNVLNSLATICIATDEGVSDEAIVQGLSGFQG VGRRFQVYGELPVDGGNVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLLLME VYPAGEEPIPGADSRKLCNSIRQRGQLDPIYIERGVDLAPLVKPLLRAGDILLCQGAGDIGGLAPKLLKSELFAGAVAAS VEGKLK >Mature_486_residues MVENQKAMPQPEMRRIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESFGAQIFIGHRAENAAAADVLV VSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIAVAGTHGKTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNA QLGTSRYLIAEADESDASFLHLQPLVAVVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPLV KRPTVTYGFSEDADVRAINVRQQGMQTFFTVLRPDREPLDVSVNMPGNHNVLNSLATICIATDEGVSDEAIVQGLSGFQG VGRRFQVYGELPVDGGNVMLVDDYGHHPTEVAAVIKAVRGGWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLLLME VYPAGEEPIPGADSRKLCNSIRQRGQLDPIYIERGVDLAPLVKPLLRAGDILLCQGAGDIGGLAPKLLKSELFAGAVAAS VEGKLK
Specific function: Cell wall formation [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786279, Length=467, Percent_Identity=62.3126338329765, Blast_Score=565, Evalue=1e-162, Organism=Escherichia coli, GI1790680, Length=469, Percent_Identity=28.5714285714286, Blast_Score=159, Evalue=3e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.8 [H]
Molecular weight: Translated: 52538; Mature: 52538
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVENQKAMPQPEMRRIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESF CCCCCCCCCCHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHC GAQIFIGHRAENAAAADVLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIA CCEEEEEECCCCCHHHHEEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCEE VAGTHGKTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQLGTSRYLIAEADESDASFL EEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEE HLQPLVAVVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPLV EHHHHHHHHHCCCHHHEEECCCCHHHHHHHHHHHHHCCCHHHEEEEECCCHHHHHHHHHH KRPTVTYGFSEDADVRAINVRQQGMQTFFTVLRPDREPLDVSVNMPGNHNVLNSLATICI CCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHEEEE ATDEGVSDEAIVQGLSGFQGVGRRFQVYGELPVDGGNVMLVDDYGHHPTEVAAVIKAVRG ECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHC GWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLLLMEVYPAGEEPIPGADSRKLCNS CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHH IRQRGQLDPIYIERGVDLAPLVKPLLRAGDILLCQGAGDIGGLAPKLLKSELFAGAVAAS HHHCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHC VEGKLK CCCCCC >Mature Secondary Structure MVENQKAMPQPEMRRIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKASPVTERLESF CCCCCCCCCCHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHC GAQIFIGHRAENAAAADVLVVSSAVNTSNPEVATALERRIPVVPRAEMLAELMRYRHGIA CCEEEEEECCCCCHHHHEEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCEE VAGTHGKTTTTSLIASVFAAGGLDPTFVIGGRLNAAGTNAQLGTSRYLIAEADESDASFL EEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEE HLQPLVAVVTNIDADHMATYDGDFNKLKKTFVEFLHNLPFYGLAVMCLDDPVVREILPLV EHHHHHHHHHCCCHHHEEECCCCHHHHHHHHHHHHHCCCHHHEEEEECCCHHHHHHHHHH KRPTVTYGFSEDADVRAINVRQQGMQTFFTVLRPDREPLDVSVNMPGNHNVLNSLATICI CCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHEEEE ATDEGVSDEAIVQGLSGFQGVGRRFQVYGELPVDGGNVMLVDDYGHHPTEVAAVIKAVRG ECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHC GWPERRLVMVYQPHRYSRTRDLYDDFVNVLADANVLLLMEVYPAGEEPIPGADSRKLCNS CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHH IRQRGQLDPIYIERGVDLAPLVKPLLRAGDILLCQGAGDIGGLAPKLLKSELFAGAVAAS HHHCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHC VEGKLK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA