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The map label for this gene is cyoA [H]

Identifier: 77460869

GI number: 77460869

Start: 5246373

End: 5247314

Strand: Reverse

Name: cyoA [H]

Synonym: Pfl01_4648

Alternate gene names: 77460869

Gene position: 5247314-5246373 (Counterclockwise)

Preceding gene: 77460871

Following gene: 77460868

Centisome position: 81.5

GC content: 56.26

Gene sequence:

>942_bases
ATGAGTAAAAACAGGTACCCCAGATTACTAGGCCTAGTGCCGCTGCTCGGCACGTTGTTGCTGGGAGGCTGCAACATGAC
CTTGCTCAATCCAACGGGCCAGGTCGGCCTGGAACAGCGCAACCTGATCATCACCGCCACGCTGCTGATGCTGTTGGTCG
TTGTGCCGGTCATCGTCATGACCTTCCTGTTCGCCTGGAAGTACCGCGCCTCGAACAAGAACGCCGTGTACACCCCGAAA
TGGTCGCACTCGACCAAGATCGAAGTGGCCGTCTGGACCATCCCGGTTCTGATCATCATTGCCCTGGGTTACATCACCTA
CAAGTCGACCCACTCGCTGGATCCGTATCGTCCGATCGAATCCGACGTCAAGCCTGTGACCATCGAAGTGGTCGCGCTGG
ACTGGAAGTGGCTGTTCATCTACCCGGAACAAGGCATCGCCACGGTCAACAAGATCGTGTTCCCGGCGCACACGCCAGTT
AACTTCCGGATCACTTCGGACGCGGTGATGAACTCGTTCTTCATCCCGGGCCTGGGCGGCCAGATCTATGCGATGGCGGG
CATGACCACCAAGCTGCACCTGATCGCTGACCGCAACGCTGAAATGGACGGTATCTCCGCCAACTACAGCGGCGCTGGTT
TCACCGGTATGAAATTCAAAGCGATCGCAACTTCTCAGGAAGATTTCGACGCCTGGGTAAGTGAAGTCAAAAAGGCACCT
AAACAGCTTGAAGCCGCTGAATACGCAGCCCTTGCCAAGCCAAGCCAGAACAATCCAGTCGAGCTCTACTCCTCGGTCAC
GCCGAACCTGTTCCAGACCATCGTCGACAAGTACGAAGGCATGAAACCAGGCAAGCCGCTGAAGCACGAGAAGAAAGAGA
AAGAAGTGGCGGCAACGGATATGGACTCGAATTCGCATTCAGCTGCCGGGGCAGAGGAGTAA

Upstream 100 bases:

>100_bases
AGCCCTTATTCAATCCAAAGAAAATGCCAACCCTTGGCAGGGTGAAGTGTTGGCGATCAAAACCCAACTGCATTGCGCAA
GCTGCTTTAGAGGTCGTGAG

Downstream 100 bases:

>100_bases
ACGATGTTTGGTAAATTAAGTTGGGAAGCGATCCCTTTCCACGAGCCGATCGTGATGGTCACCATCTCGATGATCGCGCT
CGGTGGTCTGGCGTTGTTCG

Product: cytochrome o ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSKNRYPRLLGLVPLLGTLLLGGCNMTLLNPTGQVGLEQRNLIITATLLMLLVVVPVIVMTFLFAWKYRASNKNAVYTPK
WSHSTKIEVAVWTIPVLIIIALGYITYKSTHSLDPYRPIESDVKPVTIEVVALDWKWLFIYPEQGIATVNKIVFPAHTPV
NFRITSDAVMNSFFIPGLGGQIYAMAGMTTKLHLIADRNAEMDGISANYSGAGFTGMKFKAIATSQEDFDAWVSEVKKAP
KQLEAAEYAALAKPSQNNPVELYSSVTPNLFQTIVDKYEGMKPGKPLKHEKKEKEVAATDMDSNSHSAAGAEE

Sequences:

>Translated_313_residues
MSKNRYPRLLGLVPLLGTLLLGGCNMTLLNPTGQVGLEQRNLIITATLLMLLVVVPVIVMTFLFAWKYRASNKNAVYTPK
WSHSTKIEVAVWTIPVLIIIALGYITYKSTHSLDPYRPIESDVKPVTIEVVALDWKWLFIYPEQGIATVNKIVFPAHTPV
NFRITSDAVMNSFFIPGLGGQIYAMAGMTTKLHLIADRNAEMDGISANYSGAGFTGMKFKAIATSQEDFDAWVSEVKKAP
KQLEAAEYAALAKPSQNNPVELYSSVTPNLFQTIVDKYEGMKPGKPLKHEKKEKEVAATDMDSNSHSAAGAEE
>Mature_312_residues
SKNRYPRLLGLVPLLGTLLLGGCNMTLLNPTGQVGLEQRNLIITATLLMLLVVVPVIVMTFLFAWKYRASNKNAVYTPKW
SHSTKIEVAVWTIPVLIIIALGYITYKSTHSLDPYRPIESDVKPVTIEVVALDWKWLFIYPEQGIATVNKIVFPAHTPVN
FRITSDAVMNSFFIPGLGGQIYAMAGMTTKLHLIADRNAEMDGISANYSGAGFTGMKFKAIATSQEDFDAWVSEVKKAPK
QLEAAEYAALAKPSQNNPVELYSSVTPNLFQTIVDKYEGMKPGKPLKHEKKEKEVAATDMDSNSHSAAGAEE

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=303, Percent_Identity=56.7656765676568, Blast_Score=356, Evalue=1e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 34510; Mature: 34379

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNRYPRLLGLVPLLGTLLLGGCNMTLLNPTGQVGLEQRNLIITATLLMLLVVVPVIVM
CCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TFLFAWKYRASNKNAVYTPKWSHSTKIEVAVWTIPVLIIIALGYITYKSTHSLDPYRPIE
HHHHHHHHCCCCCCEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SDVKPVTIEVVALDWKWLFIYPEQGIATVNKIVFPAHTPVNFRITSDAVMNSFFIPGLGG
CCCCEEEEEEEEEEEEEEEEECCCCCHHHHHEEECCCCCEEEEEEHHHHHHHEECCCCCC
QIYAMAGMTTKLHLIADRNAEMDGISANYSGAGFTGMKFKAIATSQEDFDAWVSEVKKAP
CEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
KQLEAAEYAALAKPSQNNPVELYSSVTPNLFQTIVDKYEGMKPGKPLKHEKKEKEVAATD
HHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
MDSNSHSAAGAEE
CCCCCCCCCCCCC
>Mature Secondary Structure 
SKNRYPRLLGLVPLLGTLLLGGCNMTLLNPTGQVGLEQRNLIITATLLMLLVVVPVIVM
CCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TFLFAWKYRASNKNAVYTPKWSHSTKIEVAVWTIPVLIIIALGYITYKSTHSLDPYRPIE
HHHHHHHHCCCCCCEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SDVKPVTIEVVALDWKWLFIYPEQGIATVNKIVFPAHTPVNFRITSDAVMNSFFIPGLGG
CCCCEEEEEEEEEEEEEEEEECCCCCHHHHHEEECCCCCEEEEEEHHHHHHHEECCCCCC
QIYAMAGMTTKLHLIADRNAEMDGISANYSGAGFTGMKFKAIATSQEDFDAWVSEVKKAP
CEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
KQLEAAEYAALAKPSQNNPVELYSSVTPNLFQTIVDKYEGMKPGKPLKHEKKEKEVAATD
HHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
MDSNSHSAAGAEE
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]