| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is catD [H]
Identifier: 77460764
GI number: 77460764
Start: 5117714
End: 5118745
Strand: Reverse
Name: catD [H]
Synonym: Pfl01_4543
Alternate gene names: 77460764
Gene position: 5118745-5117714 (Counterclockwise)
Preceding gene: 77460766
Following gene: 77460763
Centisome position: 79.5
GC content: 63.76
Gene sequence:
>1032_bases ATGTTCAAGGGATTTTTTGCAGTCGCGGCGTTGTTGGCCGCGGTTTTTTTAGTTCCGGCGTCCTATGCGGCGTCGCGTTG CGACGTCAATGTACCGACCGAACGGGTCGATCTGCAGCAGGTGAGCCTGGCGTACCAGAGCATCGGTCGTGCGTCGGATC CGGCGTTGCTGCTGGTGATGGGGCTGGGCGGACAGTTGATCCACTGGCCGGATGAAGTGGTGGTTGCGCTGTGTCAGCAG GGGTTCCGGGTGATCCGCTATGACAACCGCGATGTCGGTCTTTCGACCTGGCGCCAGGCGCCGGCCGACGCCAACCTTAC CTTTGAAGTGCTGCGCTACAAACTCGGCCTGCCGGTGGCGGCGCCTTACAGCCTTACAGACATGGCCGACGATGCGCTGG GCCTGATGGACGCGCTGCACGTCGAGCAATTCCACGTGCTCGGCGCGAGCATGGGCGGGATGATCGCTCAGCACATGGCG GCGATGGCCCCGCAACGGGTCGAGAGCCTGACGCTGATCATGACCAGCTCCGGCGCCGAAGGGCTGCCGGCGCCGAGCGC GGCGTTGGTGCAGTTGTTGTCACGGCGCGGTGCTCCCAATCGCCAGATCGCCTTGGAGCAACAGGCGGATCTGCTGGCGG CGCTGGGCAGTCCGACGGTCACTGATGATCGCCAGATGTTGCTGCATCAGGCGGCGCTGTCCTATGACCGGGCGTTCAAC CCTGAAGGCGTGAAGCGCCAGATCATGGCGATCCTCGCCGAACCGAGTCGGGTGGCGTTGCTCAATCAACTGCGCGTCCC GACCCTGGTGGTGCATGGCACGGCGGATCCGCTGCTGCCGGTGATGCACGGCGTGCACCTGGCGGCGCACATTCGTGGCA GTCAGTTGCGACTGATTCCGGGGCTGGCGCACCGTTTTCAGGAAGCGTTCAAGGAGCCGTTGCTGGCGGCGGTGTTGCCG TATTTGCGCGAGCATCGCGAAGACACGTCGCACTGGGCGCAGATTTTAGGCTCGGGATCTGATTTTCTCTGA
Upstream 100 bases:
>100_bases TCGGCACTCTTCATCAAACTGTCATCGAACTGTGGCAGCGCGCTTGAACAAACTTCATCAGACTCGCGCTCTACTGGGGT TCTGCGTTTCGGTGTTTTTC
Downstream 100 bases:
>100_bases ATGTAGATCGTTAGTTTTATTTCTATAATTTTAGAAAGTTAGTTGGATTTGCTCTTAGCAAGGGTTTCTTATTTCATTTT TATCTTGCGAACTGTTATTT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MFKGFFAVAALLAAVFLVPASYAASRCDVNVPTERVDLQQVSLAYQSIGRASDPALLLVMGLGGQLIHWPDEVVVALCQQ GFRVIRYDNRDVGLSTWRQAPADANLTFEVLRYKLGLPVAAPYSLTDMADDALGLMDALHVEQFHVLGASMGGMIAQHMA AMAPQRVESLTLIMTSSGAEGLPAPSAALVQLLSRRGAPNRQIALEQQADLLAALGSPTVTDDRQMLLHQAALSYDRAFN PEGVKRQIMAILAEPSRVALLNQLRVPTLVVHGTADPLLPVMHGVHLAAHIRGSQLRLIPGLAHRFQEAFKEPLLAAVLP YLREHREDTSHWAQILGSGSDFL
Sequences:
>Translated_343_residues MFKGFFAVAALLAAVFLVPASYAASRCDVNVPTERVDLQQVSLAYQSIGRASDPALLLVMGLGGQLIHWPDEVVVALCQQ GFRVIRYDNRDVGLSTWRQAPADANLTFEVLRYKLGLPVAAPYSLTDMADDALGLMDALHVEQFHVLGASMGGMIAQHMA AMAPQRVESLTLIMTSSGAEGLPAPSAALVQLLSRRGAPNRQIALEQQADLLAALGSPTVTDDRQMLLHQAALSYDRAFN PEGVKRQIMAILAEPSRVALLNQLRVPTLVVHGTADPLLPVMHGVHLAAHIRGSQLRLIPGLAHRFQEAFKEPLLAAVLP YLREHREDTSHWAQILGSGSDFL >Mature_343_residues MFKGFFAVAALLAAVFLVPASYAASRCDVNVPTERVDLQQVSLAYQSIGRASDPALLLVMGLGGQLIHWPDEVVVALCQQ GFRVIRYDNRDVGLSTWRQAPADANLTFEVLRYKLGLPVAAPYSLTDMADDALGLMDALHVEQFHVLGASMGGMIAQHMA AMAPQRVESLTLIMTSSGAEGLPAPSAALVQLLSRRGAPNRQIALEQQADLLAALGSPTVTDDRQMLLHQAALSYDRAFN PEGVKRQIMAILAEPSRVALLNQLRVPTLVVHGTADPLLPVMHGVHLAAHIRGSQLRLIPGLAHRFQEAFKEPLLAAVLP YLREHREDTSHWAQILGSGSDFL
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 37151; Mature: 37151
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKGFFAVAALLAAVFLVPASYAASRCDVNVPTERVDLQQVSLAYQSIGRASDPALLLVM CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE GLGGQLIHWPDEVVVALCQQGFRVIRYDNRDVGLSTWRQAPADANLTFEVLRYKLGLPVA CCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCC APYSLTDMADDALGLMDALHVEQFHVLGASMGGMIAQHMAAMAPQRVESLTLIMTSSGAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEECCCCC GLPAPSAALVQLLSRRGAPNRQIALEQQADLLAALGSPTVTDDRQMLLHQAALSYDRAFN CCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC PEGVKRQIMAILAEPSRVALLNQLRVPTLVVHGTADPLLPVMHGVHLAAHIRGSQLRLIP CCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHEEECCCCEEECH GLAHRFQEAFKEPLLAAVLPYLREHREDTSHWAQILGSGSDFL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MFKGFFAVAALLAAVFLVPASYAASRCDVNVPTERVDLQQVSLAYQSIGRASDPALLLVM CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE GLGGQLIHWPDEVVVALCQQGFRVIRYDNRDVGLSTWRQAPADANLTFEVLRYKLGLPVA CCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCC APYSLTDMADDALGLMDALHVEQFHVLGASMGGMIAQHMAAMAPQRVESLTLIMTSSGAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEECCCCC GLPAPSAALVQLLSRRGAPNRQIALEQQADLLAALGSPTVTDDRQMLLHQAALSYDRAFN CCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC PEGVKRQIMAILAEPSRVALLNQLRVPTLVVHGTADPLLPVMHGVHLAAHIRGSQLRLIP CCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHEEECCCCEEECH GLAHRFQEAFKEPLLAAVLPYLREHREDTSHWAQILGSGSDFL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]