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The map label for this gene is ybaK [H]

Identifier: 77460751

GI number: 77460751

Start: 5103944

End: 5104414

Strand: Reverse

Name: ybaK [H]

Synonym: Pfl01_4530

Alternate gene names: 77460751

Gene position: 5104414-5103944 (Counterclockwise)

Preceding gene: 77460763

Following gene: 77460750

Centisome position: 79.28

GC content: 61.15

Gene sequence:

>471_bases
ATGACCCCTGCGTTGGACTTGTTGAAAAAAGTTCGTGCCGAACATCACGTGCACAGTTACGAACATGACCCGAAGGCCGC
GTCATATGGCCTGGAGGCCGCGGAGAAACTGGGGCTCGATCCGGCGCAGGTATTCAAGACGCTGCTGGCGGCCAGCGAGA
AGGGTGAGTTGCTGGTGGCAGTGGTGCCGGTCGTCGGAAGTCTCGACCTCAAGGGGCTCGCCCACGCCGCCGGCGTGAAA
AAAGTCGAGATGGCCGACCCGGCCGCCGCGCAACGCTCCACCGGTTATCTGTTGGGCGGCATCAGTCCGCTGGGGCAGAA
AAAACGCCTGCGTACCTTCATCGATAATTCGGCCCAGCCTTTTGCGACCATTTATGTCAGTGCCGGCCGGCGAGGGCTGG
AAGTGGAACTGGCGCCGGCAGTATTGGCAGAACACACCCAGGCGAAATTTGCCGACATCGGTCGCCCTTGA

Upstream 100 bases:

>100_bases
CGCAAACCCCGGGAAACGTGGCGCGTGGTAGAGCCTTTTGCCCAGCGATGGCCTAAAATCCGCCGCAGGATTTTTTGCCA
CTGCCGAGCCCGGAGCTGCC

Downstream 100 bases:

>100_bases
CGTCTGTATGAAGAAAATTGGCCGGCACTGTCACTGGCGCTGATCCGGCCGGCGCTGCATGCTCGTTCGACTGACACAGG
GAGAAGGTTATGCAGCTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTPALDLLKKVRAEHHVHSYEHDPKAASYGLEAAEKLGLDPAQVFKTLLAASEKGELLVAVVPVVGSLDLKGLAHAAGVK
KVEMADPAAAQRSTGYLLGGISPLGQKKRLRTFIDNSAQPFATIYVSAGRRGLEVELAPAVLAEHTQAKFADIGRP

Sequences:

>Translated_156_residues
MTPALDLLKKVRAEHHVHSYEHDPKAASYGLEAAEKLGLDPAQVFKTLLAASEKGELLVAVVPVVGSLDLKGLAHAAGVK
KVEMADPAAAQRSTGYLLGGISPLGQKKRLRTFIDNSAQPFATIYVSAGRRGLEVELAPAVLAEHTQAKFADIGRP
>Mature_155_residues
TPALDLLKKVRAEHHVHSYEHDPKAASYGLEAAEKLGLDPAQVFKTLLAASEKGELLVAVVPVVGSLDLKGLAHAAGVKK
VEMADPAAAQRSTGYLLGGISPLGQKKRLRTFIDNSAQPFATIYVSAGRRGLEVELAPAVLAEHTQAKFADIGRP

Specific function: Functions in trans to edit the amino acid from incorrectly charged Cys-tRNA(Pro). May compensate for the lack of Cys-tRNA(Pro) editing by ProRS. Additionally serves as a general deacylase with weak activity against Cys-tRNA(Cys) and Gly- tRNA(Gly), as wel

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prolyl-tRNA editing family. ProX subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786688, Length=157, Percent_Identity=61.7834394904459, Blast_Score=186, Evalue=6e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004369
- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 16528; Mature: 16397

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPALDLLKKVRAEHHVHSYEHDPKAASYGLEAAEKLGLDPAQVFKTLLAASEKGELLVA
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEE
VVPVVGSLDLKGLAHAAGVKKVEMADPAAAQRSTGYLLGGISPLGQKKRLRTFIDNSAQP
EECCCCCCCHHHHHHHHCCCEECCCCCCHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCC
FATIYVSAGRRGLEVELAPAVLAEHTQAKFADIGRP
EEEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TPALDLLKKVRAEHHVHSYEHDPKAASYGLEAAEKLGLDPAQVFKTLLAASEKGELLVA
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEE
VVPVVGSLDLKGLAHAAGVKKVEMADPAAAQRSTGYLLGGISPLGQKKRLRTFIDNSAQP
EECCCCCCCHHHHHHHHCCCEECCCCCCHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCC
FATIYVSAGRRGLEVELAPAVLAEHTQAKFADIGRP
EEEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 3012467; 10493123 [H]