| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is mrp [C]
Identifier: 77460727
GI number: 77460727
Start: 5081374
End: 5082468
Strand: Reverse
Name: mrp [C]
Synonym: Pfl01_4506
Alternate gene names: 77460727
Gene position: 5082468-5081374 (Counterclockwise)
Preceding gene: 77460736
Following gene: 77460725
Centisome position: 78.94
GC content: 64.02
Gene sequence:
>1095_bases ATGAGTGCCGTCACTCGCGCAGCGGTGGAAGCCGTCCTCAGCCAATACACCGACCCTTACCTGAACCAGGATCCGGTCAG CGCCGGTTGCGTGCGCAACATCGAAATCACTGGCGATCGCGTCAGCGTGCAGCTGGAAATCGGTTATGCCGCGGGTCTGT TCAAGAGCGGCTGGGCGCAATTGCTGCAACTGGCCATCGAAAACCTCGACGGCGTGGTGACTGCCAGGGTCGAGGTCAAC AGCGTGATCGCCGCGCACAAGGCCCAGGCGCAGATTCCGGGGCTGGCCAACGTCAAGAACGTGGTCGCCGTGGCCTCCGG CAAGGGCGGTGTGGGCAAATCCACCACCGCTGCCAACCTGGCGCTGGCGCTGGCTCGCGAAGGCGCGAAGGTCGGAATTC TCGACGCCGATATCTACGGCCCGAGCCAGGGCATCATGTTCGGCATCCCCGAGGGCACCCGTCCGCAGGTCAAGGATCAG AAATGGTTCGTGCCGCTGCAGGCCCATGGCGTGGAAGTGATGTCGATGGCGTTCCTGACCGACGACAACACTCCGATGGT CTGGCGCGGGCCGATGGTCTCCGGCGCGCTGCTGCAACTGGTCACGCAAACCGCCTGGGGCGATCTGGATTACCTGGTGA TCGACATGCCGCCCGGCACCGGCGACATCCAGCTGACCCTGGCGCAGAAAGTCCCGGTAGCTGGCGCCGTGATCGTCACC ACACCGCAGGATCTGGCGCTGCTCGACGCGCGCAAGGGCGTGGAAATGTTCCGCAAGGTCAACATCCCGGTGCTGGGCGT GGTGGAAAACATGGCCGTGCACATCTGCTCGAACTGCGGTCATGCCGAGCATCTGTTCGGTGAGGGCGGTGGCGAGAAGC TGGCGACCCAGTTCGGCGTCGAGCTGCTGGCTTCGTTGCCGCTGTCGATGCTGATCCGCGAACAGGCCGATGGCGGCAAA CCGACGGTGATTTCCGAGCCGGACAGCCAGATCGCCATGGTTTACCAGGAACTGGCTCGCCATGTCGGCGCGCGGATCGT ATTGCAGGAAGCAGCCTCGCCGGCGATGCCGAACATCACCATCAGCGACGATTGA
Upstream 100 bases:
>100_bases GATATTTCACCTCTGCAAATCGTTGCCGGACATGCCGTCCGGAGGACAGAAGGGGTAGGATACCCGCCATCTTTTCCCAG TCTTGTTATCGGAGTTGCCC
Downstream 100 bases:
>100_bases TGCCTGCGGTTTAAACAAAAACGCCCCGGTGCCTGTGCACCGGGGCGTTTTTCATTGCGTGGCAGGGGTCAGATGCGCAA CCCACCGTCCATCTCCAGAA
Product: ParA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSAVTRAAVEAVLSQYTDPYLNQDPVSAGCVRNIEITGDRVSVQLEIGYAAGLFKSGWAQLLQLAIENLDGVVTARVEVN SVIAAHKAQAQIPGLANVKNVVAVASGKGGVGKSTTAANLALALAREGAKVGILDADIYGPSQGIMFGIPEGTRPQVKDQ KWFVPLQAHGVEVMSMAFLTDDNTPMVWRGPMVSGALLQLVTQTAWGDLDYLVIDMPPGTGDIQLTLAQKVPVAGAVIVT TPQDLALLDARKGVEMFRKVNIPVLGVVENMAVHICSNCGHAEHLFGEGGGEKLATQFGVELLASLPLSMLIREQADGGK PTVISEPDSQIAMVYQELARHVGARIVLQEAASPAMPNITISDD
Sequences:
>Translated_364_residues MSAVTRAAVEAVLSQYTDPYLNQDPVSAGCVRNIEITGDRVSVQLEIGYAAGLFKSGWAQLLQLAIENLDGVVTARVEVN SVIAAHKAQAQIPGLANVKNVVAVASGKGGVGKSTTAANLALALAREGAKVGILDADIYGPSQGIMFGIPEGTRPQVKDQ KWFVPLQAHGVEVMSMAFLTDDNTPMVWRGPMVSGALLQLVTQTAWGDLDYLVIDMPPGTGDIQLTLAQKVPVAGAVIVT TPQDLALLDARKGVEMFRKVNIPVLGVVENMAVHICSNCGHAEHLFGEGGGEKLATQFGVELLASLPLSMLIREQADGGK PTVISEPDSQIAMVYQELARHVGARIVLQEAASPAMPNITISDD >Mature_363_residues SAVTRAAVEAVLSQYTDPYLNQDPVSAGCVRNIEITGDRVSVQLEIGYAAGLFKSGWAQLLQLAIENLDGVVTARVEVNS VIAAHKAQAQIPGLANVKNVVAVASGKGGVGKSTTAANLALALAREGAKVGILDADIYGPSQGIMFGIPEGTRPQVKDQK WFVPLQAHGVEVMSMAFLTDDNTPMVWRGPMVSGALLQLVTQTAWGDLDYLVIDMPPGTGDIQLTLAQKVPVAGAVIVTT PQDLALLDARKGVEMFRKVNIPVLGVVENMAVHICSNCGHAEHLFGEGGGEKLATQFGVELLASLPLSMLIREQADGGKP TVISEPDSQIAMVYQELARHVGARIVLQEAASPAMPNITISDD
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=254, Percent_Identity=50.7874015748031, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI118572611, Length=264, Percent_Identity=37.1212121212121, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI6912540, Length=240, Percent_Identity=41.6666666666667, Blast_Score=166, Evalue=2e-41, Organism=Escherichia coli, GI87082045, Length=352, Percent_Identity=48.8636363636364, Blast_Score=327, Evalue=6e-91, Organism=Caenorhabditis elegans, GI25143050, Length=261, Percent_Identity=42.1455938697318, Blast_Score=193, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6322188, Length=279, Percent_Identity=34.7670250896057, Blast_Score=178, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6321347, Length=242, Percent_Identity=38.0165289256198, Blast_Score=157, Evalue=3e-39, Organism=Drosophila melanogaster, GI221511043, Length=245, Percent_Identity=42.0408163265306, Blast_Score=208, Evalue=5e-54, Organism=Drosophila melanogaster, GI24667611, Length=261, Percent_Identity=40.6130268199234, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI19921440, Length=239, Percent_Identity=37.6569037656904, Blast_Score=140, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 38349; Mature: 38217
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVTRAAVEAVLSQYTDPYLNQDPVSAGCVRNIEITGDRVSVQLEIGYAAGLFKSGWAQ CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEECHHHHHHHHHHHH LLQLAIENLDGVVTARVEVNSVIAAHKAQAQIPGLANVKNVVAVASGKGGVGKSTTAANL HHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHH ALALAREGAKVGILDADIYGPSQGIMFGIPEGTRPQVKDQKWFVPLQAHGVEVMSMAFLT HHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCEEEEEHHHCCEEEEEEEEEE DDNTPMVWRGPMVSGALLQLVTQTAWGDLDYLVIDMPPGTGDIQLTLAQKVPVAGAVIVT CCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCCCCEEEEE TPQDLALLDARKGVEMFRKVNIPVLGVVENMAVHICSNCGHAEHLFGEGGGEKLATQFGV CCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHH ELLASLPLSMLIREQADGGKPTVISEPDSQIAMVYQELARHVGARIVLQEAASPAMPNIT HHHHHCCHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEE ISDD ECCC >Mature Secondary Structure SAVTRAAVEAVLSQYTDPYLNQDPVSAGCVRNIEITGDRVSVQLEIGYAAGLFKSGWAQ CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEECHHHHHHHHHHHH LLQLAIENLDGVVTARVEVNSVIAAHKAQAQIPGLANVKNVVAVASGKGGVGKSTTAANL HHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHH ALALAREGAKVGILDADIYGPSQGIMFGIPEGTRPQVKDQKWFVPLQAHGVEVMSMAFLT HHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCEEEEEHHHCCEEEEEEEEEE DDNTPMVWRGPMVSGALLQLVTQTAWGDLDYLVIDMPPGTGDIQLTLAQKVPVAGAVIVT CCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCCCCEEEEE TPQDLALLDARKGVEMFRKVNIPVLGVVENMAVHICSNCGHAEHLFGEGGGEKLATQFGV CCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHH ELLASLPLSMLIREQADGGKPTVISEPDSQIAMVYQELARHVGARIVLQEAASPAMPNIT HHHHHCCHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEE ISDD ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA