| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yusP [H]
Identifier: 77460700
GI number: 77460700
Start: 5050558
End: 5052075
Strand: Direct
Name: yusP [H]
Synonym: Pfl01_4479
Alternate gene names: 77460700
Gene position: 5050558-5052075 (Clockwise)
Preceding gene: 77460699
Following gene: 77460705
Centisome position: 78.44
GC content: 63.77
Gene sequence:
>1518_bases GTGACCAATCTCAACCATCCCGAAACGCCCAAACCGGCCATTCGCAGCGTGCTGGTCGCGCTGATGATGGCGATCTTTCT CGGCGCGCTGGACCAGACCATCGTCGCCGTTTCCATGCCGGCCATCTCCGCCCAGTTCAAGGACGTCAGCCTGTTGGCAT GGGTGATTTCCGGCTACATGGTGGCGATGACCGTGGCGGTGCCGATCTACGGCAAGCTCGGCGATCTGTACGGGCGGCGC AAACTGATGCTGTTCGGCATGGGCATGTTCACCCTAGCGTCGCTGTTCTGCGGCATGGCCCAGAGCATGGAGCAACTGGT GCTGGCGCGGATTTTCCAGGGCATCGGCGCTGGCGGGATGATTTCGGTGAGTCAGGCGATCATCGGCGACATCGTGCCAC CTCGCGAACGCGGGCGTTATCAGGGCTATTTCTCCAGCATGTACGCGGTGGCCAGTGTGGCCGGCCCGGTGCTCGGCGGT TACATGACCGAGTACCTGTCGTGGCGCTGGGTGTTTCTGATCAACCTGCCGCTGGGCCTTGGCGCTTACTGGGTGGCGCG ACGCAATCTGATCGGCCTGCCGATTCCGCAGCGCAAACCAGTCATCGATTATCTCGGCACGCTGTTGATGATCATCGGCC TGACGGCACTGTTGCTGGCGATCACTCAGGTCGGCCAGGGCCATGCGTGGCGCAGCAGTGAAGTGCTCGGTCTGTTCGCT TGCGCGATGGCAGTGTTGGCGGTGTTCGTCTGGCATGAACGACGCGCGCGGGAGCCGTTGCTGCCGATGCACTTGTTCAC CAATCGCAGTGCGCTGCTGTGCTGGTGCACGATTTTCTTTTGCAGCTTCCAGGCGATTTCCCTGATCGTGCTGATGCCGC TGCGCTTTCAGAGCGTAACCGGTGCCGGCGCCGACAGCGCTGCGTTGCACCTGCTGCCGCTGGCGATGGGTTTGCCGATC GGCGCGTATTTCGCCGGACGTCGCACCTCGATCACCGGGCGCTACAAACCGCAGATTCTGACCGGCGCGCTGCTGATGCC GGTCTCGATCCTCGGCATGGCCTTCAGCCCGCCCGATGCGACGCTGCTCAGCAGCCTGTTCATGTTGCTCAGCGGGATCG CCGGCGGCATGCAGTTCCCGACCTCGCTGGTCGGCACCCAAAACTCGGTCGAGCAAAAGGACATTGGCGTCGCCACCAGC ACCACCAACCTGTTCCGCTCCCTGGGCGGCGCGGTGGGCGTAGCGTTGATGTCGGCGCTGTTGCTGGCGTTGTTGCAGGA CTCCAGTTTCGCGCACCTGGCCGGCAGCTCGCTGATGAGCGAAGGGCATTCCGGCAACGTGTTGCTCGATGGCCTGAACG CGGCACCCGGCGATGCGCAGAATGCCTTGCGTGCCGAATTGCTGGTGACGTTCCGGCATTTGCTGATGGTCAGCGCGGCG GTTTCGCTGCTTGGGCTGGCGGCGGCGATCGCGATGCCGAACCGGTTGCTGCGGGGCCGTGAGCACGGCGCCCGCTGA
Upstream 100 bases:
>100_bases CCTTATGAGGCTATCGAATAGCTTCCTACCGACTTACACTGGCGAGCATCCCCGCTCGCCTGGCGATCTGCGGGACCCTC ACTGCCCGCAGGTTTTGCCC
Downstream 100 bases:
>100_bases TTGATGCCGATGGCTCCCACGCGCTGCGTGGGAGCGCTCACGAATCAGGCACTGTAGTAACCGACCGCCACCAGCATGTT CCCGACCTTCTTCAGGTAGG
Product: EmrB/QacA family drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MTNLNHPETPKPAIRSVLVALMMAIFLGALDQTIVAVSMPAISAQFKDVSLLAWVISGYMVAMTVAVPIYGKLGDLYGRR KLMLFGMGMFTLASLFCGMAQSMEQLVLARIFQGIGAGGMISVSQAIIGDIVPPRERGRYQGYFSSMYAVASVAGPVLGG YMTEYLSWRWVFLINLPLGLGAYWVARRNLIGLPIPQRKPVIDYLGTLLMIIGLTALLLAITQVGQGHAWRSSEVLGLFA CAMAVLAVFVWHERRAREPLLPMHLFTNRSALLCWCTIFFCSFQAISLIVLMPLRFQSVTGAGADSAALHLLPLAMGLPI GAYFAGRRTSITGRYKPQILTGALLMPVSILGMAFSPPDATLLSSLFMLLSGIAGGMQFPTSLVGTQNSVEQKDIGVATS TTNLFRSLGGAVGVALMSALLLALLQDSSFAHLAGSSLMSEGHSGNVLLDGLNAAPGDAQNALRAELLVTFRHLLMVSAA VSLLGLAAAIAMPNRLLRGREHGAR
Sequences:
>Translated_505_residues MTNLNHPETPKPAIRSVLVALMMAIFLGALDQTIVAVSMPAISAQFKDVSLLAWVISGYMVAMTVAVPIYGKLGDLYGRR KLMLFGMGMFTLASLFCGMAQSMEQLVLARIFQGIGAGGMISVSQAIIGDIVPPRERGRYQGYFSSMYAVASVAGPVLGG YMTEYLSWRWVFLINLPLGLGAYWVARRNLIGLPIPQRKPVIDYLGTLLMIIGLTALLLAITQVGQGHAWRSSEVLGLFA CAMAVLAVFVWHERRAREPLLPMHLFTNRSALLCWCTIFFCSFQAISLIVLMPLRFQSVTGAGADSAALHLLPLAMGLPI GAYFAGRRTSITGRYKPQILTGALLMPVSILGMAFSPPDATLLSSLFMLLSGIAGGMQFPTSLVGTQNSVEQKDIGVATS TTNLFRSLGGAVGVALMSALLLALLQDSSFAHLAGSSLMSEGHSGNVLLDGLNAAPGDAQNALRAELLVTFRHLLMVSAA VSLLGLAAAIAMPNRLLRGREHGAR >Mature_504_residues TNLNHPETPKPAIRSVLVALMMAIFLGALDQTIVAVSMPAISAQFKDVSLLAWVISGYMVAMTVAVPIYGKLGDLYGRRK LMLFGMGMFTLASLFCGMAQSMEQLVLARIFQGIGAGGMISVSQAIIGDIVPPRERGRYQGYFSSMYAVASVAGPVLGGY MTEYLSWRWVFLINLPLGLGAYWVARRNLIGLPIPQRKPVIDYLGTLLMIIGLTALLLAITQVGQGHAWRSSEVLGLFAC AMAVLAVFVWHERRAREPLLPMHLFTNRSALLCWCTIFFCSFQAISLIVLMPLRFQSVTGAGADSAALHLLPLAMGLPIG AYFAGRRTSITGRYKPQILTGALLMPVSILGMAFSPPDATLLSSLFMLLSGIAGGMQFPTSLVGTQNSVEQKDIGVATST TNLFRSLGGAVGVALMSALLLALLQDSSFAHLAGSSLMSEGHSGNVLLDGLNAAPGDAQNALRAELLVTFRHLLMVSAAV SLLGLAAAIAMPNRLLRGREHGAR
Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=428, Percent_Identity=27.5700934579439, Blast_Score=144, Evalue=2e-35, Organism=Escherichia coli, GI87081983, Length=323, Percent_Identity=31.2693498452012, Blast_Score=136, Evalue=4e-33, Organism=Escherichia coli, GI1788710, Length=432, Percent_Identity=28.7037037037037, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI1790195, Length=357, Percent_Identity=27.7310924369748, Blast_Score=123, Evalue=3e-29, Organism=Escherichia coli, GI1788392, Length=294, Percent_Identity=29.2517006802721, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1788509, Length=136, Percent_Identity=30.1470588235294, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1790146, Length=137, Percent_Identity=29.1970802919708, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6319770, Length=389, Percent_Identity=27.7634961439589, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6323735, Length=453, Percent_Identity=27.8145695364238, Blast_Score=129, Evalue=8e-31, Organism=Saccharomyces cerevisiae, GI6322958, Length=472, Percent_Identity=24.5762711864407, Blast_Score=115, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6325455, Length=452, Percent_Identity=24.5575221238938, Blast_Score=112, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6321663, Length=466, Percent_Identity=24.2489270386266, Blast_Score=106, Evalue=9e-24, Organism=Saccharomyces cerevisiae, GI6324954, Length=242, Percent_Identity=26.0330578512397, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324264, Length=163, Percent_Identity=26.9938650306748, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 53932; Mature: 53801
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLNHPETPKPAIRSVLVALMMAIFLGALDQTIVAVSMPAISAQFKDVSLLAWVISGYM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VAMTVAVPIYGKLGDLYGRRKLMLFGMGMFTLASLFCGMAQSMEQLVLARIFQGIGAGGM HHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ISVSQAIIGDIVPPRERGRYQGYFSSMYAVASVAGPVLGGYMTEYLSWRWVFLINLPLGL HHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCC GAYWVARRNLIGLPIPQRKPVIDYLGTLLMIIGLTALLLAITQVGQGHAWRSSEVLGLFA HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH CAMAVLAVFVWHERRAREPLLPMHLFTNRSALLCWCTIFFCSFQAISLIVLMPLRFQSVT HHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GAGADSAALHLLPLAMGLPIGAYFAGRRTSITGRYKPQILTGALLMPVSILGMAFSPPDA CCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH TLLSSLFMLLSGIAGGMQFPTSLVGTQNSVEQKDIGVATSTTNLFRSLGGAVGVALMSAL HHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LLALLQDSSFAHLAGSSLMSEGHSGNVLLDGLNAAPGDAQNALRAELLVTFRHLLMVSAA HHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VSLLGLAAAIAMPNRLLRGREHGAR HHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TNLNHPETPKPAIRSVLVALMMAIFLGALDQTIVAVSMPAISAQFKDVSLLAWVISGYM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VAMTVAVPIYGKLGDLYGRRKLMLFGMGMFTLASLFCGMAQSMEQLVLARIFQGIGAGGM HHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ISVSQAIIGDIVPPRERGRYQGYFSSMYAVASVAGPVLGGYMTEYLSWRWVFLINLPLGL HHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCC GAYWVARRNLIGLPIPQRKPVIDYLGTLLMIIGLTALLLAITQVGQGHAWRSSEVLGLFA HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH CAMAVLAVFVWHERRAREPLLPMHLFTNRSALLCWCTIFFCSFQAISLIVLMPLRFQSVT HHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GAGADSAALHLLPLAMGLPIGAYFAGRRTSITGRYKPQILTGALLMPVSILGMAFSPPDA CCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH TLLSSLFMLLSGIAGGMQFPTSLVGTQNSVEQKDIGVATSTTNLFRSLGGAVGVALMSAL HHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LLALLQDSSFAHLAGSSLMSEGHSGNVLLDGLNAAPGDAQNALRAELLVTFRHLLMVSAA HHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VSLLGLAAAIAMPNRLLRGREHGAR HHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]