| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ilvI [H]
Identifier: 77460692
GI number: 77460692
Start: 5042494
End: 5044131
Strand: Reverse
Name: ilvI [H]
Synonym: Pfl01_4471
Alternate gene names: 77460692
Gene position: 5044131-5042494 (Counterclockwise)
Preceding gene: 77460694
Following gene: 77460691
Centisome position: 78.34
GC content: 65.63
Gene sequence:
>1638_bases ATGGCGACGTGTGGCGAAGTACTGGTCAAGTTACTCGAAGATTATGGGGTCGAGCAGGTGTTCGGCATTCCCGGTGTGCA TACCGTGGAGCTGTATCGCGGGCTGGCCCGTTCGAGCATCAACCACGTCACCCCGCGCCACGAGCAGGGCGCCGGCTTCA TGGCCGACGGCTACGCCCGTACCAGCGGCAAACCAGGTGTGTGCTTCATCATCACCGGCCCTGGCATGACCAACATCACC ACCGCCATGGGCCAGGCGTACGCCGATTCGATCCCGATGCTGGTGATCTCCAGTGTGCAGTCGCGCAGCCAATTGGGCGG CGGTCGCGGCAAGCTGCATGAACTGCCGAACCAGAGCGCACTGGTCGGTGGCGTGGCGGCGTTCTCCCACACCCTGATGT CGGCGTCCGAATTGCCGGGTGTGCTGGCCCGTGCGTTTGCGCTGTTCCAGGCCGGGCGTCCGCGTCCGGTGCACATCGAG ATTCCGCTGGACGTGCTGGTCGAAGAAGCCGACGAACTGCTGACCAGCGTGCCGGTCAACATCGACCGCGCCGGAGCTGC GCCGGCCGCCGTGAGCCGCATGACCGAACTGCTGGCCGGCGCCCGGCGTCCGCTGATCCTTGCCGGTGGCGGCGCCATCG ATGCCGCTGCCGAACTCACCGAACTGGCTGAGCTGCTTGATGCACCAATGGCTCTGACCATCAACGCCAAAGGCATGCTG CCGTCCAGCCATCCGCTGTTGATCGGTTCGACCCAGAGCCTGGTGGCGACCCGTGCTCTGGTGGCCGATGCCGACGTGAT CCTGGCGATCGGCACCGAGCTGGCGGAAACCGACTACGACGTGACCTTCGCCGGCGGTTTCGAAATCCCCGGCAAGCTGC TGCGTGTGGACATCGATCCCGACCAGACCGTGCGCAACTACCCGCCTCACGTGGCGCTGGTGGCCGACTCGCGCAATGCC GCACAAGCGTTGCTCAGCGCGCTGTCGCACAAACCGCTGGCCGAGCGCCGCAACGATTGGGGCCAGGTACGCGCCGCCCG TCTGCGTGAAGACCTGGCCGCGACCTGGGACGCGCCGACCCTGGCCCAGACCCGTTTCCTCGAAACCGTGCTGCACGAAT TGCCGAACGCAGTGTTCGTCGGTGACTCCACGCAACCGGTGTACACCGGCAACCTGACGTTCAACCCGGAGCGTCCGCGC CGCTGGTTCAACTCGTCCACCGGTTACGGCACCCTCGGTTACGCCTTGCCGGCGGCGATTGGCGCGTGGCTTGGCGGCAA CCTCGAACACGGCGCGCGTCCGCCGGTGGTGTGCCTGATCGGCGACGGCGGTCTGCAATTCACCCTGCCGGAACTGGCCA GCGCTGTGGAGGCGCGCACGCCGGTGATCATCCTGCTGTGGAATAACCAGGGTTACGAAGAGATCAAGAAATACATGGTC AACCGTGCCATCGAGCCAGTGGGCGTCGACATCTACACCCCGGACTTCATCGGCGTGGCCAAGGCCCTGGGTTGCGCGGC GCAAGCGATCAGCTCCGCTGAACATCTGCGCGGTGCACTGCGCGCCGCCACCGATCGTCAGGGCCCGACCCTGATTGAAA TCGACCAGACCCAATGGATGAAGGCGGTGGCCCAATGA
Upstream 100 bases:
>100_bases GCTTTTATCGATTGTTGCGGCTACGGGTCGCCCGTTTCAATGAGGCCAATCACCGGTTCCTTTACAGCCCGGTGCCTCAA CGAACAAGAAGGGCAAAGAC
Downstream 100 bases:
>100_bases TGAATTTCCCGACCACACTCGACGGCCTGTACATCAACGGCCAATGGTCCGCCGGCCGCGAACACCTGCGCGTCATCAAT CCGGCCACCGAAGCGCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MATCGEVLVKLLEDYGVEQVFGIPGVHTVELYRGLARSSINHVTPRHEQGAGFMADGYARTSGKPGVCFIITGPGMTNIT TAMGQAYADSIPMLVISSVQSRSQLGGGRGKLHELPNQSALVGGVAAFSHTLMSASELPGVLARAFALFQAGRPRPVHIE IPLDVLVEEADELLTSVPVNIDRAGAAPAAVSRMTELLAGARRPLILAGGGAIDAAAELTELAELLDAPMALTINAKGML PSSHPLLIGSTQSLVATRALVADADVILAIGTELAETDYDVTFAGGFEIPGKLLRVDIDPDQTVRNYPPHVALVADSRNA AQALLSALSHKPLAERRNDWGQVRAARLREDLAATWDAPTLAQTRFLETVLHELPNAVFVGDSTQPVYTGNLTFNPERPR RWFNSSTGYGTLGYALPAAIGAWLGGNLEHGARPPVVCLIGDGGLQFTLPELASAVEARTPVIILLWNNQGYEEIKKYMV NRAIEPVGVDIYTPDFIGVAKALGCAAQAISSAEHLRGALRAATDRQGPTLIEIDQTQWMKAVAQ
Sequences:
>Translated_545_residues MATCGEVLVKLLEDYGVEQVFGIPGVHTVELYRGLARSSINHVTPRHEQGAGFMADGYARTSGKPGVCFIITGPGMTNIT TAMGQAYADSIPMLVISSVQSRSQLGGGRGKLHELPNQSALVGGVAAFSHTLMSASELPGVLARAFALFQAGRPRPVHIE IPLDVLVEEADELLTSVPVNIDRAGAAPAAVSRMTELLAGARRPLILAGGGAIDAAAELTELAELLDAPMALTINAKGML PSSHPLLIGSTQSLVATRALVADADVILAIGTELAETDYDVTFAGGFEIPGKLLRVDIDPDQTVRNYPPHVALVADSRNA AQALLSALSHKPLAERRNDWGQVRAARLREDLAATWDAPTLAQTRFLETVLHELPNAVFVGDSTQPVYTGNLTFNPERPR RWFNSSTGYGTLGYALPAAIGAWLGGNLEHGARPPVVCLIGDGGLQFTLPELASAVEARTPVIILLWNNQGYEEIKKYMV NRAIEPVGVDIYTPDFIGVAKALGCAAQAISSAEHLRGALRAATDRQGPTLIEIDQTQWMKAVAQ >Mature_544_residues ATCGEVLVKLLEDYGVEQVFGIPGVHTVELYRGLARSSINHVTPRHEQGAGFMADGYARTSGKPGVCFIITGPGMTNITT AMGQAYADSIPMLVISSVQSRSQLGGGRGKLHELPNQSALVGGVAAFSHTLMSASELPGVLARAFALFQAGRPRPVHIEI PLDVLVEEADELLTSVPVNIDRAGAAPAAVSRMTELLAGARRPLILAGGGAIDAAAELTELAELLDAPMALTINAKGMLP SSHPLLIGSTQSLVATRALVADADVILAIGTELAETDYDVTFAGGFEIPGKLLRVDIDPDQTVRNYPPHVALVADSRNAA QALLSALSHKPLAERRNDWGQVRAARLREDLAATWDAPTLAQTRFLETVLHELPNAVFVGDSTQPVYTGNLTFNPERPRR WFNSSTGYGTLGYALPAAIGAWLGGNLEHGARPPVVCLIGDGGLQFTLPELASAVEARTPVIILLWNNQGYEEIKKYMVN RAIEPVGVDIYTPDFIGVAKALGCAAQAISSAEHLRGALRAATDRQGPTLIEIDQTQWMKAVAQ
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=561, Percent_Identity=25.8467023172906, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI21361361, Length=551, Percent_Identity=28.3121597096189, Blast_Score=146, Evalue=4e-35, Organism=Escherichia coli, GI87081685, Length=559, Percent_Identity=30.2325581395349, Blast_Score=233, Evalue=2e-62, Organism=Escherichia coli, GI1790104, Length=542, Percent_Identity=31.3653136531365, Blast_Score=224, Evalue=1e-59, Organism=Escherichia coli, GI1786717, Length=562, Percent_Identity=29.8932384341637, Blast_Score=187, Evalue=2e-48, Organism=Escherichia coli, GI1788716, Length=549, Percent_Identity=26.2295081967213, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1787096, Length=546, Percent_Identity=23.4432234432234, Blast_Score=109, Evalue=6e-25, Organism=Caenorhabditis elegans, GI17542570, Length=581, Percent_Identity=24.9569707401033, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17531299, Length=558, Percent_Identity=22.9390681003584, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17531301, Length=558, Percent_Identity=22.9390681003584, Blast_Score=103, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6323755, Length=581, Percent_Identity=27.710843373494, Blast_Score=183, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6320816, Length=497, Percent_Identity=23.5412474849095, Blast_Score=101, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6323163, Length=491, Percent_Identity=24.6435845213849, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6323073, Length=501, Percent_Identity=24.1516966067864, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI19922626, Length=567, Percent_Identity=26.2786596119929, Blast_Score=152, Evalue=5e-37,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 57826; Mature: 57695
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATCGEVLVKLLEDYGVEQVFGIPGVHTVELYRGLARSSINHVTPRHEQGAGFMADGYAR CCCHHHHHHHHHHHCCCHHECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCC TSGKPGVCFIITGPGMTNITTAMGQAYADSIPMLVISSVQSRSQLGGGRGKLHELPNQSA CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCH LVGGVAAFSHTLMSASELPGVLARAFALFQAGRPRPVHIEIPLDVLVEEADELLTSVPVN HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCC IDRAGAAPAAVSRMTELLAGARRPLILAGGGAIDAAAELTELAELLDAPMALTINAKGML CCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCC PSSHPLLIGSTQSLVATRALVADADVILAIGTELAETDYDVTFAGGFEIPGKLLRVDIDP CCCCCEEEECHHHHHHHHHHHHCCCEEEEECCHHHCCCCCEEEECCCCCCCEEEEEECCC DQTVRNYPPHVALVADSRNAAQALLSALSHKPLAERRNDWGQVRAARLREDLAATWDAPT CCHHHCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCH LAQTRFLETVLHELPNAVFVGDSTQPVYTGNLTFNPERPRRWFNSSTGYGTLGYALPAAI HHHHHHHHHHHHHCCCEEEECCCCCCEEECCEEECCCCHHHHHCCCCCCCHHHHHHHHHH GAWLGGNLEHGARPPVVCLIGDGGLQFTLPELASAVEARTPVIILLWNNQGYEEIKKYMV HHHHCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH NRAIEPVGVDIYTPDFIGVAKALGCAAQAISSAEHLRGALRAATDRQGPTLIEIDQTQWM HCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHH KAVAQ HHHCC >Mature Secondary Structure ATCGEVLVKLLEDYGVEQVFGIPGVHTVELYRGLARSSINHVTPRHEQGAGFMADGYAR CCHHHHHHHHHHHCCCHHECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCC TSGKPGVCFIITGPGMTNITTAMGQAYADSIPMLVISSVQSRSQLGGGRGKLHELPNQSA CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCCCCCH LVGGVAAFSHTLMSASELPGVLARAFALFQAGRPRPVHIEIPLDVLVEEADELLTSVPVN HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCC IDRAGAAPAAVSRMTELLAGARRPLILAGGGAIDAAAELTELAELLDAPMALTINAKGML CCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCC PSSHPLLIGSTQSLVATRALVADADVILAIGTELAETDYDVTFAGGFEIPGKLLRVDIDP CCCCCEEEECHHHHHHHHHHHHCCCEEEEECCHHHCCCCCEEEECCCCCCCEEEEEECCC DQTVRNYPPHVALVADSRNAAQALLSALSHKPLAERRNDWGQVRAARLREDLAATWDAPT CCHHHCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCH LAQTRFLETVLHELPNAVFVGDSTQPVYTGNLTFNPERPRRWFNSSTGYGTLGYALPAAI HHHHHHHHHHHHHCCCEEEECCCCCCEEECCEEECCCCHHHHHCCCCCCCHHHHHHHHHH GAWLGGNLEHGARPPVVCLIGDGGLQFTLPELASAVEARTPVIILLWNNQGYEEIKKYMV HHHHCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH NRAIEPVGVDIYTPDFIGVAKALGCAAQAISSAEHLRGALRAATDRQGPTLIEIDQTQWM HCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHH KAVAQ HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10555290 [H]