| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77460665
Identifier: 77460665
GI number: 77460665
Start: 5004581
End: 5005915
Strand: Direct
Name: 77460665
Synonym: Pfl01_4444
Alternate gene names: NA
Gene position: 5004581-5005915 (Clockwise)
Preceding gene: 77460664
Following gene: 77460666
Centisome position: 77.73
GC content: 59.7
Gene sequence:
>1335_bases GTGAAACCCTCGCGCCTGCTGTTGATCTGGCTGGCGTTCCTGCTGGCCATCGGCATTGTGCTGGGCGCGTTGCAGGCGCT GGATGTGGAAGTGCCATCGAGCCTGTTGTCGATCAACTGGGGTTTGTTGCTGGCGCTGTTTGCGCTGAGCCTGCTGGACG CGCTGCGTCTCAAGCGTCTGCCCTCGCCCCGCGTGCAACGACAGGTGCCCGGCAGCCTGGCCCTCGGTCGCTGGAGCGAT ATCCGGCTGGAAGTCGAACACGAGCTCGACCAGCCACTGGCCATTCAAATCTTCGACCACGTACCCGACAGCCTCGGCTA CGAAAACCTGCCGCTCTCCACCGAGCTGCAACCCGGCCAGCGCAGCCTGATCGGCTATCGCCTGCGCCCGCTCAAACGCG GCCACTACACCTTCGAAACCTGCGAACTCAACCTGCCGAGCCCCTTCGGCCTGTGGTCCGGCAAACGCCTGCTGACCATC ACCGACCACACCCGCGTCTACCCCGACTTCGCCCGCCTCTACGGCGGCCAGTTGCTGGCGGTCGACAACTGGCTCAGCCA GCTCGGCGTGCGTCAGCGCCAGCGTCGTGGCCTGGGAATGGAATTCCATCAGCTCAGGGAATTTCGCGAAGGCGACAGCC TGCGCCAGATCGACTGGAAAGCCACCGCCCGCCATCGCACCCCGATTGCCCAGGAGTACGAAGACGAGCGGGATCAACAG ATTGTTTTCATGCTCGATTGCGGGCGGCAGATGCGCAGTCAGGATGGGGACCTGTCGCATTTCGATCATGCGTTGAATGC GTGTTTGCTGTTGAGTCATGTGGCGTTGCGGCAGGGGGATGCGGTGGGATTCATGACCTTTGCCAGTGATCAGCCGCGGT TTATTGCACCGGTCAAAGGTGCGGGGCAGCTCAAGGTGTTGCTCAACGGTGTTTATGACCTGGATAGCACGCGGCGTTCG GCGGATTATCCGGCGGCGGTAAATCAGTTGCTGGCGAGGCAGAAGCGTCGGGCGCTGGTGGTGTTGGTGACGAATGTGCG GGATAAGGATGATGAGGAATTGCTGAACGCCGTCAGACAATTAAGCCAACAGCATCAAGTACTCGTGGCCAGCCTGCGTG AAAGCACGCTTGAAGATAGACGGCATTCGCAGGTGCAAACGATTGAGCAAGCGCTTGAATACTGCGCAACAGTGGATTAC CTGAACGCCCGATCGGTGCTCCATGAAAAATTGAGTGCCCAAGGAGTGCAAGTGATAGATGCCCCCCCAAGTGAATTGAG TACAGACGTAATTTCGCGGTATCTGAGCTGGAAAAAATCTGGAGCACTCTGCTAA
Upstream 100 bases:
>100_bases TGCGCCATCGCGTACGCCTTGCGCCGGAGCTGGACATCGAAGGGCTGCAAGTCGATCAAGTGCTTCAGCAACTGCTCGAC CAAGTACCGGCGCCGCGCCT
Downstream 100 bases:
>100_bases CACATTGTGAAATTCACACGGGAAGGCCAGATTAAAACTACGAAAAATCAAAAGCTCTAAACAATAAGCTGGCTCAGTTC ACCCGAGGAGCATCACAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MKPSRLLLIWLAFLLAIGIVLGALQALDVEVPSSLLSINWGLLLALFALSLLDALRLKRLPSPRVQRQVPGSLALGRWSD IRLEVEHELDQPLAIQIFDHVPDSLGYENLPLSTELQPGQRSLIGYRLRPLKRGHYTFETCELNLPSPFGLWSGKRLLTI TDHTRVYPDFARLYGGQLLAVDNWLSQLGVRQRQRRGLGMEFHQLREFREGDSLRQIDWKATARHRTPIAQEYEDERDQQ IVFMLDCGRQMRSQDGDLSHFDHALNACLLLSHVALRQGDAVGFMTFASDQPRFIAPVKGAGQLKVLLNGVYDLDSTRRS ADYPAAVNQLLARQKRRALVVLVTNVRDKDDEELLNAVRQLSQQHQVLVASLRESTLEDRRHSQVQTIEQALEYCATVDY LNARSVLHEKLSAQGVQVIDAPPSELSTDVISRYLSWKKSGALC
Sequences:
>Translated_444_residues MKPSRLLLIWLAFLLAIGIVLGALQALDVEVPSSLLSINWGLLLALFALSLLDALRLKRLPSPRVQRQVPGSLALGRWSD IRLEVEHELDQPLAIQIFDHVPDSLGYENLPLSTELQPGQRSLIGYRLRPLKRGHYTFETCELNLPSPFGLWSGKRLLTI TDHTRVYPDFARLYGGQLLAVDNWLSQLGVRQRQRRGLGMEFHQLREFREGDSLRQIDWKATARHRTPIAQEYEDERDQQ IVFMLDCGRQMRSQDGDLSHFDHALNACLLLSHVALRQGDAVGFMTFASDQPRFIAPVKGAGQLKVLLNGVYDLDSTRRS ADYPAAVNQLLARQKRRALVVLVTNVRDKDDEELLNAVRQLSQQHQVLVASLRESTLEDRRHSQVQTIEQALEYCATVDY LNARSVLHEKLSAQGVQVIDAPPSELSTDVISRYLSWKKSGALC >Mature_444_residues MKPSRLLLIWLAFLLAIGIVLGALQALDVEVPSSLLSINWGLLLALFALSLLDALRLKRLPSPRVQRQVPGSLALGRWSD IRLEVEHELDQPLAIQIFDHVPDSLGYENLPLSTELQPGQRSLIGYRLRPLKRGHYTFETCELNLPSPFGLWSGKRLLTI TDHTRVYPDFARLYGGQLLAVDNWLSQLGVRQRQRRGLGMEFHQLREFREGDSLRQIDWKATARHRTPIAQEYEDERDQQ IVFMLDCGRQMRSQDGDLSHFDHALNACLLLSHVALRQGDAVGFMTFASDQPRFIAPVKGAGQLKVLLNGVYDLDSTRRS ADYPAAVNQLLARQKRRALVVLVTNVRDKDDEELLNAVRQLSQQHQVLVASLRESTLEDRRHSQVQTIEQALEYCATVDY LNARSVLHEKLSAQGVQVIDAPPSELSTDVISRYLSWKKSGALC
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50259; Mature: 50259
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPSRLLLIWLAFLLAIGIVLGALQALDVEVPSSLLSINWGLLLALFALSLLDALRLKRL CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSPRVQRQVPGSLALGRWSDIRLEVEHELDQPLAIQIFDHVPDSLGYENLPLSTELQPGQ CCCHHHHCCCCCEECCCCCCEEEEECCCCCCCCEEHHHHHCCHHCCCCCCCCCCCCCCCH RSLIGYRLRPLKRGHYTFETCELNLPSPFGLWSGKRLLTITDHTRVYPDFARLYGGQLLA HHHHHHHHCHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCEEE VDNWLSQLGVRQRQRRGLGMEFHQLREFREGDSLRQIDWKATARHRTPIAQEYEDERDQQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECHHHHHCCCCCCHHHHHCCCCCE IVFMLDCGRQMRSQDGDLSHFDHALNACLLLSHVALRQGDAVGFMTFASDQPRFIAPVKG EEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCC AGQLKVLLNGVYDLDSTRRSADYPAAVNQLLARQKRRALVVLVTNVRDKDDEELLNAVRQ CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHH LSQQHQVLVASLRESTLEDRRHSQVQTIEQALEYCATVDYLNARSVLHEKLSAQGVQVID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE APPSELSTDVISRYLSWKKSGALC CCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKPSRLLLIWLAFLLAIGIVLGALQALDVEVPSSLLSINWGLLLALFALSLLDALRLKRL CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSPRVQRQVPGSLALGRWSDIRLEVEHELDQPLAIQIFDHVPDSLGYENLPLSTELQPGQ CCCHHHHCCCCCEECCCCCCEEEEECCCCCCCCEEHHHHHCCHHCCCCCCCCCCCCCCCH RSLIGYRLRPLKRGHYTFETCELNLPSPFGLWSGKRLLTITDHTRVYPDFARLYGGQLLA HHHHHHHHCHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCEEE VDNWLSQLGVRQRQRRGLGMEFHQLREFREGDSLRQIDWKATARHRTPIAQEYEDERDQQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECHHHHHCCCCCCHHHHHCCCCCE IVFMLDCGRQMRSQDGDLSHFDHALNACLLLSHVALRQGDAVGFMTFASDQPRFIAPVKG EEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCC AGQLKVLLNGVYDLDSTRRSADYPAAVNQLLARQKRRALVVLVTNVRDKDDEELLNAVRQ CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHH LSQQHQVLVASLRESTLEDRRHSQVQTIEQALEYCATVDYLNARSVLHEKLSAQGVQVID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE APPSELSTDVISRYLSWKKSGALC CCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA