| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yeaC [H]
Identifier: 77460664
GI number: 77460664
Start: 5003583
End: 5004584
Strand: Direct
Name: yeaC [H]
Synonym: Pfl01_4443
Alternate gene names: 77460664
Gene position: 5003583-5004584 (Clockwise)
Preceding gene: 77460663
Following gene: 77460665
Centisome position: 77.71
GC content: 65.67
Gene sequence:
>1002_bases ATGACCGAACACATCGAACCCGGCTCACCCAGCCACGTGGCTCAGCAACGCCAGCGCGCCAGCCAGTTGGCCCAGGCGGT GCGCGGCGAATTGCAGAAGGCGCTGATCGGCCAGAACCCGGTGATCGACGATGTGCTGACCGCGCTGATCGCCGGCGGTC ACGTGCTGCTCGAAGGCGTTCCCGGCCTCGGCAAGACCTTGTTGGTACGCGCCCTGGCAAAATGCTTCGGCGGCGAGTTC GCGCGAATTCAGTTCACCCCGGACCTGATGCCCAGCGACGTCACCGGCCACGCGGTATACGACCTGCAGACCGAGCAATT CAAACTGCGCAAAGGCCCGTTGTTCACCCACCTGTTGCTGGCCGACGAGATCAACCGCGCCCCGGCCAAGACGCAAGCCG CCCTGCTCGAAGCGATGCAGGAACGTCAGGTCACTCTCGAAGGCCGGGCCCTGCCGATTGCTCAACCGTTCATGGTGCTC GCCACGCAAAACCCGATCGAACAGGAAGGCACTTATCCGCTGCCGGAAGCCGAACTCGACCGCTTCATGCTCAAGGTGCG CATGGATTACCCCGACGCCGATCAGGAGCTGGACATGGTGCGTCAGGTCAGCCGTTCGACCCGCGCCGACATGCTCGACG TGCAACCGCTGCGCACCGTGCTGCAGGCCAAGGACGTGCAAGCCTTGCAACGCATCGCCAGTGATCTGCCGCTGGACGAG CAAGTGCTCGATTTCGCCGTGCGCCTCGCCCGCAGCACCCGCACTTGGCCGGGGCTGACCCTCGGCGCCGGGCCACGCGC CTCCATCGCACTGGTGCGTTGCGCCCGCGCCCGGGCCCTGTTGCGCGGCGGCGAATTCGTGATTCCCGACGACATCAAGG GCTGCGCACTGGCGGTGTTGCGCCATCGCGTACGCCTTGCGCCGGAGCTGGACATCGAAGGGCTGCAAGTCGATCAAGTG CTTCAGCAACTGCTCGACCAAGTACCGGCGCCGCGCCTGTGA
Upstream 100 bases:
>100_bases GTGCCATCAGCCAGGCCCTGAGCCCGGCACCGAAGCGGCGTATGTCCAGCGCCGAATTCTGCCGTCAGGTCGCCCACCTG CAAGCCTTGAGGAACACGCT
Downstream 100 bases:
>100_bases AACCCTCGCGCCTGCTGTTGATCTGGCTGGCGTTCCTGCTGGCCATCGGCATTGTGCTGGGCGCGTTGCAGGCGCTGGAT GTGGAAGTGCCATCGAGCCT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTEHIEPGSPSHVAQQRQRASQLAQAVRGELQKALIGQNPVIDDVLTALIAGGHVLLEGVPGLGKTLLVRALAKCFGGEF ARIQFTPDLMPSDVTGHAVYDLQTEQFKLRKGPLFTHLLLADEINRAPAKTQAALLEAMQERQVTLEGRALPIAQPFMVL ATQNPIEQEGTYPLPEAELDRFMLKVRMDYPDADQELDMVRQVSRSTRADMLDVQPLRTVLQAKDVQALQRIASDLPLDE QVLDFAVRLARSTRTWPGLTLGAGPRASIALVRCARARALLRGGEFVIPDDIKGCALAVLRHRVRLAPELDIEGLQVDQV LQQLLDQVPAPRL
Sequences:
>Translated_333_residues MTEHIEPGSPSHVAQQRQRASQLAQAVRGELQKALIGQNPVIDDVLTALIAGGHVLLEGVPGLGKTLLVRALAKCFGGEF ARIQFTPDLMPSDVTGHAVYDLQTEQFKLRKGPLFTHLLLADEINRAPAKTQAALLEAMQERQVTLEGRALPIAQPFMVL ATQNPIEQEGTYPLPEAELDRFMLKVRMDYPDADQELDMVRQVSRSTRADMLDVQPLRTVLQAKDVQALQRIASDLPLDE QVLDFAVRLARSTRTWPGLTLGAGPRASIALVRCARARALLRGGEFVIPDDIKGCALAVLRHRVRLAPELDIEGLQVDQV LQQLLDQVPAPRL >Mature_332_residues TEHIEPGSPSHVAQQRQRASQLAQAVRGELQKALIGQNPVIDDVLTALIAGGHVLLEGVPGLGKTLLVRALAKCFGGEFA RIQFTPDLMPSDVTGHAVYDLQTEQFKLRKGPLFTHLLLADEINRAPAKTQAALLEAMQERQVTLEGRALPIAQPFMVLA TQNPIEQEGTYPLPEAELDRFMLKVRMDYPDADQELDMVRQVSRSTRADMLDVQPLRTVLQAKDVQALQRIASDLPLDEQ VLDFAVRLARSTRTWPGLTLGAGPRASIALVRCARARALLRGGEFVIPDDIKGCALAVLRHRVRLAPELDIEGLQVDQVL QQLLDQVPAPRL
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 36673; Mature: 36542
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEHIEPGSPSHVAQQRQRASQLAQAVRGELQKALIGQNPVIDDVLTALIAGGHVLLEGV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHEEECC PGLGKTLLVRALAKCFGGEFARIQFTPDLMPSDVTGHAVYDLQTEQFKLRKGPLFTHLLL CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCHHHHHHHCCCHHHHHHH ADEINRAPAKTQAALLEAMQERQVTLEGRALPIAQPFMVLATQNPIEQEGTYPLPEAELD HHHHCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHH RFMLKVRMDYPDADQELDMVRQVSRSTRADMLDVQPLRTVLQAKDVQALQRIASDLPLDE HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH QVLDFAVRLARSTRTWPGLTLGAGPRASIALVRCARARALLRGGEFVIPDDIKGCALAVL HHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHH RHRVRLAPELDIEGLQVDQVLQQLLDQVPAPRL HHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure TEHIEPGSPSHVAQQRQRASQLAQAVRGELQKALIGQNPVIDDVLTALIAGGHVLLEGV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHEEECC PGLGKTLLVRALAKCFGGEFARIQFTPDLMPSDVTGHAVYDLQTEQFKLRKGPLFTHLLL CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCHHHHHHHCCCHHHHHHH ADEINRAPAKTQAALLEAMQERQVTLEGRALPIAQPFMVLATQNPIEQEGTYPLPEAELD HHHHCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHH RFMLKVRMDYPDADQELDMVRQVSRSTRADMLDVQPLRTVLQAKDVQALQRIASDLPLDE HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH QVLDFAVRLARSTRTWPGLTLGAGPRASIALVRCARARALLRGGEFVIPDDIKGCALAVL HHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHH RHRVRLAPELDIEGLQVDQVLQQLLDQVPAPRL HHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]