| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460663
Identifier: 77460663
GI number: 77460663
Start: 5002420
End: 5003586
Strand: Direct
Name: 77460663
Synonym: Pfl01_4442
Alternate gene names: NA
Gene position: 5002420-5003586 (Clockwise)
Preceding gene: 77460662
Following gene: 77460664
Centisome position: 77.7
GC content: 63.07
Gene sequence:
>1167_bases TTGAACCGGCGCGCGCTGTGGCTTCTGGGCGGTGCGCTGATCGTCGCCCTGCTCGCTGTGCTGGGCATTTATCTGTACCT CAAGGCCACGCCGTACCAGACCGAAGTCGATCACGGCCCGTCCCCCGCTGCGCAAGCCAACCCTTATCTGGCGGCGGAGA TGTTTCTGCGCGAGCGCGGGATCGACGTCAGCCATGCCGAAAGCCTTGCCGTGCTACCTGAAATCGATCCGCGCCAGCAC ACGTTGCTGATGTTCAACGACCGCTCGAAAATGACTCCGCGTCAGGTTGACCAGGTATTGAACTGGGCCCGGGCCGGCGG AAGGCTGGTGTTCGTCGCCGAATCGATCTGGGATGAAAAGACCGGCCAGAGCAACGACCTGCTGCTCGACCGCGTGCAAC TGCGTCAATCCTTCAGCAAGGATCTCAAGGATCCGCCGCCGGATGCCGCCGAAGACCCGTTCCCGAATCTGACCAAACTC TATCTGGAAGACGAAGACGCACCCGCCTACGCCGGATTCGACACCGCGTTCCACCTCGACGACCCGAAAAACCTCGCCCA GGCCTGGGCCAACAGCGCGAAAGCCACGCACATGATGCAACTGGCTTTCGGCCTCGGCACGATCACCGTGGTCACCGATG CCGACCTGTGGAAAACCCCGGCGATTGCGCAGCACGACAATGCCTGGCTGCTCTGGTACCTCAGCGCCGACACCGCCGTG ACCTTGTTGTACAACACCGAACACGACGGTCTGTTGACCCTGCTCTGGCGCTACTTCCCGCAAGCCATCGTCGCCTTGCT GGCGCTGATCGGTCTTTGGCTGTGGCATGTCGGCGTGCGTCACGGTCCGGTGCAGGCGCCCGTCCTAAGTGGTCGTCGAC AGTTGATGGAACACCTGCGCGCCAGTGCCGGTTTCGTCCTGCGTCACAACGGCCAGCAGACCTTGCTGCAAGCGTTGCAG CAGGATGTCCTGCGCCGCGCCCGTCACCGTCATCCCGGTTTCGACCAACTGAACGTCGCCGAACAATGGCTGGTGCTGTC GCGCCTGACCCGCCAACCGACCCGTGCCATCAGCCAGGCCCTGAGCCCGGCACCGAAGCGGCGTATGTCCAGCGCCGAAT TCTGCCGTCAGGTCGCCCACCTGCAAGCCTTGAGGAACACGCTATGA
Upstream 100 bases:
>100_bases ATTGGCAGAACATGGCCTACGGGCACCGCGTACCGGCGGCACATCTGCAACAGGAATTGTGTGATGGCTGGCGCTCCCTG TTCGGCCACGGAGCCGCCCG
Downstream 100 bases:
>100_bases CCGAACACATCGAACCCGGCTCACCCAGCCACGTGGCTCAGCAACGCCAGCGCGCCAGCCAGTTGGCCCAGGCGGTGCGC GGCGAATTGCAGAAGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MNRRALWLLGGALIVALLAVLGIYLYLKATPYQTEVDHGPSPAAQANPYLAAEMFLRERGIDVSHAESLAVLPEIDPRQH TLLMFNDRSKMTPRQVDQVLNWARAGGRLVFVAESIWDEKTGQSNDLLLDRVQLRQSFSKDLKDPPPDAAEDPFPNLTKL YLEDEDAPAYAGFDTAFHLDDPKNLAQAWANSAKATHMMQLAFGLGTITVVTDADLWKTPAIAQHDNAWLLWYLSADTAV TLLYNTEHDGLLTLLWRYFPQAIVALLALIGLWLWHVGVRHGPVQAPVLSGRRQLMEHLRASAGFVLRHNGQQTLLQALQ QDVLRRARHRHPGFDQLNVAEQWLVLSRLTRQPTRAISQALSPAPKRRMSSAEFCRQVAHLQALRNTL
Sequences:
>Translated_388_residues MNRRALWLLGGALIVALLAVLGIYLYLKATPYQTEVDHGPSPAAQANPYLAAEMFLRERGIDVSHAESLAVLPEIDPRQH TLLMFNDRSKMTPRQVDQVLNWARAGGRLVFVAESIWDEKTGQSNDLLLDRVQLRQSFSKDLKDPPPDAAEDPFPNLTKL YLEDEDAPAYAGFDTAFHLDDPKNLAQAWANSAKATHMMQLAFGLGTITVVTDADLWKTPAIAQHDNAWLLWYLSADTAV TLLYNTEHDGLLTLLWRYFPQAIVALLALIGLWLWHVGVRHGPVQAPVLSGRRQLMEHLRASAGFVLRHNGQQTLLQALQ QDVLRRARHRHPGFDQLNVAEQWLVLSRLTRQPTRAISQALSPAPKRRMSSAEFCRQVAHLQALRNTL >Mature_388_residues MNRRALWLLGGALIVALLAVLGIYLYLKATPYQTEVDHGPSPAAQANPYLAAEMFLRERGIDVSHAESLAVLPEIDPRQH TLLMFNDRSKMTPRQVDQVLNWARAGGRLVFVAESIWDEKTGQSNDLLLDRVQLRQSFSKDLKDPPPDAAEDPFPNLTKL YLEDEDAPAYAGFDTAFHLDDPKNLAQAWANSAKATHMMQLAFGLGTITVVTDADLWKTPAIAQHDNAWLLWYLSADTAV TLLYNTEHDGLLTLLWRYFPQAIVALLALIGLWLWHVGVRHGPVQAPVLSGRRQLMEHLRASAGFVLRHNGQQTLLQALQ QDVLRRARHRHPGFDQLNVAEQWLVLSRLTRQPTRAISQALSPAPKRRMSSAEFCRQVAHLQALRNTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43622; Mature: 43622
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRALWLLGGALIVALLAVLGIYLYLKATPYQTEVDHGPSPAAQANPYLAAEMFLRERG CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC IDVSHAESLAVLPEIDPRQHTLLMFNDRSKMTPRQVDQVLNWARAGGRLVFVAESIWDEK CCCHHCCCEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHCCCC TGQSNDLLLDRVQLRQSFSKDLKDPPPDAAEDPFPNLTKLYLEDEDAPAYAGFDTAFHLD CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECC DPKNLAQAWANSAKATHMMQLAFGLGTITVVTDADLWKTPAIAQHDNAWLLWYLSADTAV CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCCCEEEEEEEECCCEE TLLYNTEHDGLLTLLWRYFPQAIVALLALIGLWLWHVGVRHGPVQAPVLSGRRQLMEHLR EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH ASAGFVLRHNGQQTLLQALQQDVLRRARHRHPGFDQLNVAEQWLVLSRLTRQPTRAISQA HHCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH LSPAPKRRMSSAEFCRQVAHLQALRNTL HCCCHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNRRALWLLGGALIVALLAVLGIYLYLKATPYQTEVDHGPSPAAQANPYLAAEMFLRERG CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC IDVSHAESLAVLPEIDPRQHTLLMFNDRSKMTPRQVDQVLNWARAGGRLVFVAESIWDEK CCCHHCCCEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHCCCC TGQSNDLLLDRVQLRQSFSKDLKDPPPDAAEDPFPNLTKLYLEDEDAPAYAGFDTAFHLD CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECC DPKNLAQAWANSAKATHMMQLAFGLGTITVVTDADLWKTPAIAQHDNAWLLWYLSADTAV CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCCCEEEEEEEECCCEE TLLYNTEHDGLLTLLWRYFPQAIVALLALIGLWLWHVGVRHGPVQAPVLSGRRQLMEHLR EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH ASAGFVLRHNGQQTLLQALQQDVLRRARHRHPGFDQLNVAEQWLVLSRLTRQPTRAISQA HHCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH LSPAPKRRMSSAEFCRQVAHLQALRNTL HCCCHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA