| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460662
Identifier: 77460662
GI number: 77460662
Start: 5000879
End: 5002423
Strand: Direct
Name: 77460662
Synonym: Pfl01_4441
Alternate gene names: NA
Gene position: 5000879-5002423 (Clockwise)
Preceding gene: 77460661
Following gene: 77460663
Centisome position: 77.67
GC content: 61.42
Gene sequence:
>1545_bases ATGCGCCTGAGTGACGCAACCGTGGCAATCCGTCCGCGCACCAATTGGGAAGCCATGGACCTGGGCGTGCTCATGAGCCA GCAACATCGGCGCCTGCTGATGACCAGTTGGGCCATCGTCACCCTGCCGCTGTTCGCGGTGCTCAGCCTGTTGTTGTGGG ATTCACCGTCACTCGCCGTGTTCATCTTCTGGTGGCTGAAACCGGCCTACGAACGCTTGCCGCTGTACATCCTGTCCAAG GCGCTGTTCGGCGAAACACCCACCTTGAAACAGGCCTTGCGCCAATGGCCGCGCCTGCTCAAGCCGCAACTCATCGCCAG CCTGACCTGGCGCCGGTTCAGCCTGAGTCGCAGCTTCCTGCTGCCCGTGCTGCAACTCGAAGGCCTCGACGGCACGGCGC GTCAGCAGCGCTTGCAAGTACTGCTGCAACGCAATGCTGGCGCCGCGCAGTGGCTGACGATCATCGGCGTGCATCTGGAA ACGGCGCTGTGGATCGGCCTGATGGTGTTGTTCTACCTGCTTCTGCCGCAACAGGTCGAAACCAATTGGGACTGGCAAAG CCTGATCTTCGCGGCCGACCACGAATGGCGCTGGCTGGAGCATCTGACCAATACGTTCTATGCGCTGATCCTGGTGATCT GGGAACCGGTGTATGTCGCCTGCGGGTTCAGCCTGTATCTGAACCGCCGCACCGTCCTCGAAGCGTGGGACATCGAACTG GTGTTCCGCCGCTTGCGCCAGCGTTTGAACAGCAGCGCAATCGGCTTGCTGCTGGCGGTGTGTCTGCTGTTGCCGGGGTT GCCCTCAGCCTGGGCTGCCGAACCTGCCACTGCGCCTGATGCACCGCGTCTGTTGAACCAGCCACTGACCAGCGAGGCAT CCCGTAACAGCATCAAGGCCTTGCTCGACCAACCGCCATTCAAGAACAAGGAAACCGTCACCCGTTATCACTTCGGCGAA GATCCCGCTGCCGCCGAAAAAGCCAGGGAAAGTGAAGCACCGCAATGGTTGAAAACACTGCTCGACTGGCTGGATGGCCG ACACCTCGATGGCCTGGCCAAGGCGATCGAAGTCGTGCTGTGGGGCGCGGCGATCGCCGGGGCTGGCTGGCTGATCCGGC GTTATCGGGATTTTCTGCAAGCATTCGTCGGCCGCCGTCCGCGCTTGCCCGAAGCGAACGGAAGACCCTTGCCACAACAA GCCTTCGGTCTGGATCTGCAAAAGGAAAGCTTGCCCGATGACATCGCCAGCCACGCGGAACAGCTCTGGCAAACCGAGCC GCGTGCGGCATTGGGGCTTTTGTACCGGGCACTGCTCAGTCATCTGCTGCACGATTTCAACCTGACCCTGAAACCCGCCG ATACCGAAAACGAAGTGCTGGCCCGGATCGAACAGTTGCAACGTCCGGATCTGCTCACTTATAGCCGTCACCTCACCGGC CATTGGCAGAACATGGCCTACGGGCACCGCGTACCGGCGGCACATCTGCAACAGGAATTGTGTGATGGCTGGCGCTCCCT GTTCGGCCACGGAGCCGCCCGTTGA
Upstream 100 bases:
>100_bases TCGTCGCGCACCGGGGTTTCGCCGCAGACCAAATACCTGGTCGGCGCCGGGCTCTGGCTCTGCGTGGCGCTCTATCTGCT GTTCGCCGGAAGGTCCCGCC
Downstream 100 bases:
>100_bases ACCGGCGCGCGCTGTGGCTTCTGGGCGGTGCGCTGATCGTCGCCCTGCTCGCTGTGCTGGGCATTTATCTGTACCTCAAG GCCACGCCGTACCAGACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MRLSDATVAIRPRTNWEAMDLGVLMSQQHRRLLMTSWAIVTLPLFAVLSLLLWDSPSLAVFIFWWLKPAYERLPLYILSK ALFGETPTLKQALRQWPRLLKPQLIASLTWRRFSLSRSFLLPVLQLEGLDGTARQQRLQVLLQRNAGAAQWLTIIGVHLE TALWIGLMVLFYLLLPQQVETNWDWQSLIFAADHEWRWLEHLTNTFYALILVIWEPVYVACGFSLYLNRRTVLEAWDIEL VFRRLRQRLNSSAIGLLLAVCLLLPGLPSAWAAEPATAPDAPRLLNQPLTSEASRNSIKALLDQPPFKNKETVTRYHFGE DPAAAEKARESEAPQWLKTLLDWLDGRHLDGLAKAIEVVLWGAAIAGAGWLIRRYRDFLQAFVGRRPRLPEANGRPLPQQ AFGLDLQKESLPDDIASHAEQLWQTEPRAALGLLYRALLSHLLHDFNLTLKPADTENEVLARIEQLQRPDLLTYSRHLTG HWQNMAYGHRVPAAHLQQELCDGWRSLFGHGAAR
Sequences:
>Translated_514_residues MRLSDATVAIRPRTNWEAMDLGVLMSQQHRRLLMTSWAIVTLPLFAVLSLLLWDSPSLAVFIFWWLKPAYERLPLYILSK ALFGETPTLKQALRQWPRLLKPQLIASLTWRRFSLSRSFLLPVLQLEGLDGTARQQRLQVLLQRNAGAAQWLTIIGVHLE TALWIGLMVLFYLLLPQQVETNWDWQSLIFAADHEWRWLEHLTNTFYALILVIWEPVYVACGFSLYLNRRTVLEAWDIEL VFRRLRQRLNSSAIGLLLAVCLLLPGLPSAWAAEPATAPDAPRLLNQPLTSEASRNSIKALLDQPPFKNKETVTRYHFGE DPAAAEKARESEAPQWLKTLLDWLDGRHLDGLAKAIEVVLWGAAIAGAGWLIRRYRDFLQAFVGRRPRLPEANGRPLPQQ AFGLDLQKESLPDDIASHAEQLWQTEPRAALGLLYRALLSHLLHDFNLTLKPADTENEVLARIEQLQRPDLLTYSRHLTG HWQNMAYGHRVPAAHLQQELCDGWRSLFGHGAAR >Mature_514_residues MRLSDATVAIRPRTNWEAMDLGVLMSQQHRRLLMTSWAIVTLPLFAVLSLLLWDSPSLAVFIFWWLKPAYERLPLYILSK ALFGETPTLKQALRQWPRLLKPQLIASLTWRRFSLSRSFLLPVLQLEGLDGTARQQRLQVLLQRNAGAAQWLTIIGVHLE TALWIGLMVLFYLLLPQQVETNWDWQSLIFAADHEWRWLEHLTNTFYALILVIWEPVYVACGFSLYLNRRTVLEAWDIEL VFRRLRQRLNSSAIGLLLAVCLLLPGLPSAWAAEPATAPDAPRLLNQPLTSEASRNSIKALLDQPPFKNKETVTRYHFGE DPAAAEKARESEAPQWLKTLLDWLDGRHLDGLAKAIEVVLWGAAIAGAGWLIRRYRDFLQAFVGRRPRLPEANGRPLPQQ AFGLDLQKESLPDDIASHAEQLWQTEPRAALGLLYRALLSHLLHDFNLTLKPADTENEVLARIEQLQRPDLLTYSRHLTG HWQNMAYGHRVPAAHLQQELCDGWRSLFGHGAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58811; Mature: 58811
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSDATVAIRPRTNWEAMDLGVLMSQQHRRLLMTSWAIVTLPLFAVLSLLLWDSPSLAV CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH FIFWWLKPAYERLPLYILSKALFGETPTLKQALRQWPRLLKPQLIASLTWRRFSLSRSFL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPVLQLEGLDGTARQQRLQVLLQRNAGAAQWLTIIGVHLETALWIGLMVLFYLLLPQQVE HHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC TNWDWQSLIFAADHEWRWLEHLTNTFYALILVIWEPVYVACGFSLYLNRRTVLEAWDIEL CCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VFRRLRQRLNSSAIGLLLAVCLLLPGLPSAWAAEPATAPDAPRLLNQPLTSEASRNSIKA HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHH LLDQPPFKNKETVTRYHFGEDPAAAEKARESEAPQWLKTLLDWLDGRHLDGLAKAIEVVL HHCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH WGAAIAGAGWLIRRYRDFLQAFVGRRPRLPEANGRPLPQQAFGLDLQKESLPDDIASHAE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCHHCCCHHHHHHHH QLWQTEPRAALGLLYRALLSHLLHDFNLTLKPADTENEVLARIEQLQRPDLLTYSRHLTG HHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHH HWQNMAYGHRVPAAHLQQELCDGWRSLFGHGAAR HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRLSDATVAIRPRTNWEAMDLGVLMSQQHRRLLMTSWAIVTLPLFAVLSLLLWDSPSLAV CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH FIFWWLKPAYERLPLYILSKALFGETPTLKQALRQWPRLLKPQLIASLTWRRFSLSRSFL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPVLQLEGLDGTARQQRLQVLLQRNAGAAQWLTIIGVHLETALWIGLMVLFYLLLPQQVE HHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC TNWDWQSLIFAADHEWRWLEHLTNTFYALILVIWEPVYVACGFSLYLNRRTVLEAWDIEL CCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH VFRRLRQRLNSSAIGLLLAVCLLLPGLPSAWAAEPATAPDAPRLLNQPLTSEASRNSIKA HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHH LLDQPPFKNKETVTRYHFGEDPAAAEKARESEAPQWLKTLLDWLDGRHLDGLAKAIEVVL HHCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH WGAAIAGAGWLIRRYRDFLQAFVGRRPRLPEANGRPLPQQAFGLDLQKESLPDDIASHAE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCHHCCCHHHHHHHH QLWQTEPRAALGLLYRALLSHLLHDFNLTLKPADTENEVLARIEQLQRPDLLTYSRHLTG HHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHH HWQNMAYGHRVPAAHLQQELCDGWRSLFGHGAAR HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA