| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460660
Identifier: 77460660
GI number: 77460660
Start: 4999193
End: 4999918
Strand: Direct
Name: 77460660
Synonym: Pfl01_4439
Alternate gene names: NA
Gene position: 4999193-4999918 (Clockwise)
Preceding gene: 77460658
Following gene: 77460661
Centisome position: 77.65
GC content: 65.01
Gene sequence:
>726_bases ATGCTCGAGACCACAGCACCGCCAAGGAAAGCACCGCTGGCCCCGCCACTGGACACGCGGCACCAGGTCGAAACGCCGGA AGGCATCGATCTGCCGCTGCGTCCCGCCGGCCTGATGGTGCGCGCCGTGGCATTCACCGTCGATCTGGGGTTGCGCGGGC TGATCCTGGGACTGCTTTTCATGTTGCTGGCGCTGCTCGGCAAACTCGGTATCGGCCTGGGCTCACTGCTGTTGTTCGGG GTGAGCTGGTGGTACATGGTGCTGTTCGAAGTACTGCGTCAGGGTCGCTCGCCGGGGAAACAATGGATGGGCCTGCGGGT GGTGCACGACGATGGCACGCCAGTCGGCTGGCCGGCCTCCCTGTTGCGCAATCTGCTGCGCTTTGTCGACCTGATGCCGT TCGGCTATTTCCTCGGTGCGATCAGTTGCCTGCAACACCCGACCTTCAAACGCCTCGGCGATATCGCGGCCGGCACGCTG GTGATCTACAGCGAACGCCCGCTCAAGCGCCCGCAATTACCCGATGCCGCCCCCCGTCGTTCGCCGATCCCGCTGACCCA GACTGAACAACGTGCCCTGCTCGCTTTCGCCGAGCGCCAGGGCGAGCTTTCGACGGCACGGGTCAATGAACTCGCTGCAT TGCTCGCTCAGCCGCTGCACATCAGCGCGCCGAAAGCCGTCGGTGAGCTCAACGGCATCGCTCGCGGCCTGTTGGGGCCG ACATGA
Upstream 100 bases:
>100_bases TTGGTTGAAGGATGTGTATGACATAGTGATGTCGTTTCCCCCCGAGAGACTGCTAGCATCGGACGCACTTGCATCCCGAT CCGGCAACATCAGGTAGCCC
Downstream 100 bases:
>100_bases AGCAAAGCCTTTTCGAATCCCGCCACAAGGCTGAATGGGAGCGTTTCACGCTTGCTCTCGAACGCCTGGAACGCGGCAAG GGCACCTCGCAGGTGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: RDD Domain Containing Protein; RDD Family Protein; Transmembrane Protein; Rdd Family Protein; RDD Domain Protein; Rdd Domain Protein
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MLETTAPPRKAPLAPPLDTRHQVETPEGIDLPLRPAGLMVRAVAFTVDLGLRGLILGLLFMLLALLGKLGIGLGSLLLFG VSWWYMVLFEVLRQGRSPGKQWMGLRVVHDDGTPVGWPASLLRNLLRFVDLMPFGYFLGAISCLQHPTFKRLGDIAAGTL VIYSERPLKRPQLPDAAPRRSPIPLTQTEQRALLAFAERQGELSTARVNELAALLAQPLHISAPKAVGELNGIARGLLGP T
Sequences:
>Translated_241_residues MLETTAPPRKAPLAPPLDTRHQVETPEGIDLPLRPAGLMVRAVAFTVDLGLRGLILGLLFMLLALLGKLGIGLGSLLLFG VSWWYMVLFEVLRQGRSPGKQWMGLRVVHDDGTPVGWPASLLRNLLRFVDLMPFGYFLGAISCLQHPTFKRLGDIAAGTL VIYSERPLKRPQLPDAAPRRSPIPLTQTEQRALLAFAERQGELSTARVNELAALLAQPLHISAPKAVGELNGIARGLLGP T >Mature_241_residues MLETTAPPRKAPLAPPLDTRHQVETPEGIDLPLRPAGLMVRAVAFTVDLGLRGLILGLLFMLLALLGKLGIGLGSLLLFG VSWWYMVLFEVLRQGRSPGKQWMGLRVVHDDGTPVGWPASLLRNLLRFVDLMPFGYFLGAISCLQHPTFKRLGDIAAGTL VIYSERPLKRPQLPDAAPRRSPIPLTQTEQRALLAFAERQGELSTARVNELAALLAQPLHISAPKAVGELNGIARGLLGP T
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26209; Mature: 26209
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLETTAPPRKAPLAPPLDTRHQVETPEGIDLPLRPAGLMVRAVAFTVDLGLRGLILGLLF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MLLALLGKLGIGLGSLLLFGVSWWYMVLFEVLRQGRSPGKQWMGLRVVHDDGTPVGWPAS HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEECCCCCCCCHHH LLRNLLRFVDLMPFGYFLGAISCLQHPTFKRLGDIAAGTLVIYSERPLKRPQLPDAAPRR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCC SPIPLTQTEQRALLAFAERQGELSTARVNELAALLAQPLHISAPKAVGELNGIARGLLGP CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC T C >Mature Secondary Structure MLETTAPPRKAPLAPPLDTRHQVETPEGIDLPLRPAGLMVRAVAFTVDLGLRGLILGLLF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MLLALLGKLGIGLGSLLLFGVSWWYMVLFEVLRQGRSPGKQWMGLRVVHDDGTPVGWPAS HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEECCCCCCCCHHH LLRNLLRFVDLMPFGYFLGAISCLQHPTFKRLGDIAAGTLVIYSERPLKRPQLPDAAPRR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCC SPIPLTQTEQRALLAFAERQGELSTARVNELAALLAQPLHISAPKAVGELNGIARGLLGP CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA