Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is slyX

Identifier: 77460637

GI number: 77460637

Start: 4974320

End: 4974526

Strand: Reverse

Name: slyX

Synonym: Pfl01_4416

Alternate gene names: 77460637

Gene position: 4974526-4974320 (Counterclockwise)

Preceding gene: 77460638

Following gene: 77460635

Centisome position: 77.26

GC content: 55.07

Gene sequence:

>207_bases
ATGAGCCTCGAACAACGTGTTACCGAGCTGGAAAGTCGTCTGGCATTTCAGGACGACACCATTCAGGCATTGAACGATGT
GCTGGTGGAGCAGCAGCGAGTGGTTGAGCGTCTGCAACTGCAGATGGCAGCCGTACTCAAGCGCCAGGAAGAGATGGTGG
GGCAGTTTGGTTCTTTCGAAGAAGACGCACCGCCGCCACACTATTGA

Upstream 100 bases:

>100_bases
GCACCCCGCCAAGCCTTACAGCGCCGAGCAAGTGGCCGCGATCCGCGAGCGCCTGCGCCTGGTGCTGGACGAAGATTTCA
CCTTTCTGGAGGGCTGAGTC

Downstream 100 bases:

>100_bases
GAAGTGCGCGGGCATGCTCCCGTTAAAAACGCATTCATTAAAAAAACCGCGAACAGCCAGGCTGTTCGCGGTTTTTTTAT
TGCGGGACGTGGATCAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MSLEQRVTELESRLAFQDDTIQALNDVLVEQQRVVERLQLQMAAVLKRQEEMVGQFGSFEEDAPPPHY

Sequences:

>Translated_68_residues
MSLEQRVTELESRLAFQDDTIQALNDVLVEQQRVVERLQLQMAAVLKRQEEMVGQFGSFEEDAPPPHY
>Mature_67_residues
SLEQRVTELESRLAFQDDTIQALNDVLVEQQRVVERLQLQMAAVLKRQEEMVGQFGSFEEDAPPPHY

Specific function: Unknown

COG id: COG2900

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the slyX family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SLYX_PSEPF (Q3K7V1)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_350144.1
- STRING:   Q3K7V1
- GeneID:   3713319
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_4416
- eggNOG:   COG2900
- HOGENOM:   HBG700945
- OMA:   ETRQAFQ
- ProtClustDB:   PRK00295
- BioCyc:   PFLU205922:PFL_4416-MONOMER
- HAMAP:   MF_00715
- InterPro:   IPR007236

Pfam domain/function: PF04102 SlyX

EC number: NA

Molecular weight: Translated: 7889; Mature: 7758

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLEQRVTELESRLAFQDDTIQALNDVLVEQQRVVERLQLQMAAVLKRQEEMVGQFGSFE
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EDAPPPHY
CCCCCCCC
>Mature Secondary Structure 
SLEQRVTELESRLAFQDDTIQALNDVLVEQQRVVERLQLQMAAVLKRQEEMVGQFGSFE
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EDAPPPHY
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA