| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is arcA [H]
Identifier: 77460607
GI number: 77460607
Start: 4945104
End: 4946360
Strand: Direct
Name: arcA [H]
Synonym: Pfl01_4386
Alternate gene names: 77460607
Gene position: 4945104-4946360 (Clockwise)
Preceding gene: 77460606
Following gene: 77460608
Centisome position: 76.81
GC content: 62.21
Gene sequence:
>1257_bases ATGACCACGGAAAAAGCTAAGTACGGCGTCCATTCCGAAGCCGGCAAACTGCGCAAAGTCATGGTTTGCTCCCCAGGTCT GGCCCATCAGCGGCTGACCCCGAACAACTGCGATGAACTGCTGTTCGACGACGTGCTGTGGGTCGCTCAGGCCAAGCGCG ACCACTTCGACTTCGTGACCAAGATGCGTGAGCGCGGAATCGACGTGCTGGAAATGCACAACCTGCTGACCGACATCGTC GGCAACCCCGAAGCGCTGGACTGGATCCTCGAGCGCAAGGTCACCGCCGACTCGGTGGGCCTGGGCCTGATCAACGAAGT CAAATCCTGGCTGAAAAGCCTGGAGCCGCGACACATCGCCGAATTCCTGATTGGCGGCGTGTCCGCCGATGACCTGCCGG ACAGCTTCGGTGGCAAGACCATCCAGATGTTCCGCGACTTCCTCGGCCACTCCAGTTTCATTCTGCCGCCGCTGCCGAAC ACCCAGTTCACCCGCGACACCACCTGCTGGATCTACGGTGGCGTGACGCTGAACCCGATGTACTGGCCGGCGCGTCGTCA GGAGACCTTGCTGACCACCGCCATCTACAAATTCCATCCGCAGTTCACCAACGCCGATTTCGAGATCTGGTACGGCGACC CGGACAAGGATCACGGCAGCTCGACCCTCGAAGGCGGCGACGTCATGCCAATCGGCAACGGCGTGGTGCTGATCGGTATG GGCGAGCGCTCGTCGCGTCAGGCCATCGGCCAACTGGCGCTGAACCTGTTCAAGAACAAGGCCGTGGAAAAAGTCATCGT CGCCGGCCTGCCGAAGTCTCGCGCCGCGATGCACCTCGATACCGTGTTCAGCTTCTGCGACCGCGACCTCGTCACGATCT TCCCGGAAGTGGTCAACCAGATCGTCGCCTTCACCCTGCGCCCTGACGAAAGCAAACAGGGCGGCATCGACATCCGTCGC GAAGAAGGCACGTTCCTCGACGTCGTGGCCAAAGCCCTCAACCTGCCGAAACTGCGCGTCGTCGAAACCGGCGGCAACAG CTTCGCCGCCGAACGCGAGCAATGGGACGACGGCAACAACGTGGTGGCCGTGGAGCCGGGCGTGGTCATCGGCTACGACC GCAACACTTACACCAACACCCTGCTGCGCAAGGCCGGGGTCGAGGTCATCACCATCAGCGCCGGCGAACTCGGTCGCGGC CGTGGCGGCGGCCACTGCATGACTTGCCCGATCATCCGCGACCCTATCGATTACTAA
Upstream 100 bases:
>100_bases GCCGCAGTGGTCGTGGGCGCCCTGGTGGCTGCCTACGGACTGTATGACGGCTTCCTGACTCTGTAATTGCCCAACGTTTT CACTCTGGAGGATCACCGAA
Downstream 100 bases:
>100_bases ACGACCATCTCCCCGGCCGCACTGACCCTGTCGCGGCCGGGCCGATTACCGAATCCAAGGAGAATCATCATGGCGTTCAA CATTCACAACCGTAACCTGC
Product: arginine deiminase
Products: NA
Alternate protein names: ADI; Arginine dihydrolase; AD [H]
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MTTEKAKYGVHSEAGKLRKVMVCSPGLAHQRLTPNNCDELLFDDVLWVAQAKRDHFDFVTKMRERGIDVLEMHNLLTDIV GNPEALDWILERKVTADSVGLGLINEVKSWLKSLEPRHIAEFLIGGVSADDLPDSFGGKTIQMFRDFLGHSSFILPPLPN TQFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPQFTNADFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGM GERSSRQAIGQLALNLFKNKAVEKVIVAGLPKSRAAMHLDTVFSFCDRDLVTIFPEVVNQIVAFTLRPDESKQGGIDIRR EEGTFLDVVAKALNLPKLRVVETGGNSFAAEREQWDDGNNVVAVEPGVVIGYDRNTYTNTLLRKAGVEVITISAGELGRG RGGGHCMTCPIIRDPIDY
Sequences:
>Translated_418_residues MTTEKAKYGVHSEAGKLRKVMVCSPGLAHQRLTPNNCDELLFDDVLWVAQAKRDHFDFVTKMRERGIDVLEMHNLLTDIV GNPEALDWILERKVTADSVGLGLINEVKSWLKSLEPRHIAEFLIGGVSADDLPDSFGGKTIQMFRDFLGHSSFILPPLPN TQFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPQFTNADFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGM GERSSRQAIGQLALNLFKNKAVEKVIVAGLPKSRAAMHLDTVFSFCDRDLVTIFPEVVNQIVAFTLRPDESKQGGIDIRR EEGTFLDVVAKALNLPKLRVVETGGNSFAAEREQWDDGNNVVAVEPGVVIGYDRNTYTNTLLRKAGVEVITISAGELGRG RGGGHCMTCPIIRDPIDY >Mature_417_residues TTEKAKYGVHSEAGKLRKVMVCSPGLAHQRLTPNNCDELLFDDVLWVAQAKRDHFDFVTKMRERGIDVLEMHNLLTDIVG NPEALDWILERKVTADSVGLGLINEVKSWLKSLEPRHIAEFLIGGVSADDLPDSFGGKTIQMFRDFLGHSSFILPPLPNT QFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHPQFTNADFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMG ERSSRQAIGQLALNLFKNKAVEKVIVAGLPKSRAAMHLDTVFSFCDRDLVTIFPEVVNQIVAFTLRPDESKQGGIDIRRE EGTFLDVVAKALNLPKLRVVETGGNSFAAEREQWDDGNNVVAVEPGVVIGYDRNTYTNTLLRKAGVEVITISAGELGRGR GGGHCMTCPIIRDPIDY
Specific function: Unknown
COG id: COG2235
COG function: function code E; Arginine deiminase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine deiminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003198 - InterPro: IPR003876 [H]
Pfam domain/function: PF02274 Amidinotransf [H]
EC number: =3.5.3.6 [H]
Molecular weight: Translated: 46363; Mature: 46231
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEKAKYGVHSEAGKLRKVMVCSPGLAHQRLTPNNCDELLFDDVLWVAQAKRDHFDFVT CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH KMRERGIDVLEMHNLLTDIVGNPEALDWILERKVTADSVGLGLINEVKSWLKSLEPRHIA HHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHCCHHHHH EFLIGGVSADDLPDSFGGKTIQMFRDFLGHSSFILPPLPNTQFTRDTTCWIYGGVTLNPM HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCEEECCC YWPARRQETLLTTAIYKFHPQFTNADFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGM CCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEC GERSSRQAIGQLALNLFKNKAVEKVIVAGLPKSRAAMHLDTVFSFCDRDLVTIFPEVVNQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH IVAFTLRPDESKQGGIDIRREEGTFLDVVAKALNLPKLRVVETGGNSFAAEREQWDDGNN HHEEEECCCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCCCC VVAVEPGVVIGYDRNTYTNTLLRKAGVEVITISAGELGRGRGGGHCMTCPIIRDPIDY EEEECCCEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure TTEKAKYGVHSEAGKLRKVMVCSPGLAHQRLTPNNCDELLFDDVLWVAQAKRDHFDFVT CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH KMRERGIDVLEMHNLLTDIVGNPEALDWILERKVTADSVGLGLINEVKSWLKSLEPRHIA HHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHCCHHHHH EFLIGGVSADDLPDSFGGKTIQMFRDFLGHSSFILPPLPNTQFTRDTTCWIYGGVTLNPM HHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCEEECCC YWPARRQETLLTTAIYKFHPQFTNADFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGM CCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEC GERSSRQAIGQLALNLFKNKAVEKVIVAGLPKSRAAMHLDTVFSFCDRDLVTIFPEVVNQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH IVAFTLRPDESKQGGIDIRREEGTFLDVVAKALNLPKLRVVETGGNSFAAEREQWDDGNN HHEEEECCCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCCCC VVAVEPGVVIGYDRNTYTNTLLRKAGVEVITISAGELGRGRGGGHCMTCPIIRDPIDY EEEECCCEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2537202; 10984043; 2158926 [H]