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The map label for this gene is ycjP [C]

Identifier: 77460589

GI number: 77460589

Start: 4921385

End: 4922230

Strand: Reverse

Name: ycjP [C]

Synonym: Pfl01_4368

Alternate gene names: 77460589

Gene position: 4922230-4921385 (Counterclockwise)

Preceding gene: 77460590

Following gene: 77460588

Centisome position: 76.45

GC content: 60.17

Gene sequence:

>846_bases
ATGACTAGTCTCGCTTCGAAACCCGCCATCAGCCTGAGTCGCGTCGCGATTTACGCGGTGCTGATCCTCGCGGTCCTGCT
GTATCTGGTACCGCTGGTGGTCATGCTGCTGACCAGCTTCAAGACCCCGGAAGACATCTCCACCGGCAACCTGCTGAGCT
GGCCGACCGTGGTCAGCGGCATCGGCTGGGTGAAAGCCTGGGCGACTGTTGACGGCTACTTCTGGAACTCGATCAAGATC
ACCGTTCCGGCCGTGATCATCTCCACCGCCATCGGTGCGTTGAACGGTTATGTACTGTCGTTCTGGCGCTTCCGTGGTTC
GCAGCTGTTTTTCGGCCTGTTGCTGTTCGGCTGCTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCACCCTCG
GCAAGATGGGCCTGGCGAGTACGACCACCGGCCTTGTGTTCATCCATGTGGTCTACGGTCTGGCGTTCACCACGCTGTTC
TTCCGTAACTACTACGTGAGCATTCCGGATGCGCTGATCAAAGCGGCACGTCTCGATGGCGCGGGCTTCTTCACGATCTT
CCGCCAGATCATCCTGCCGATGTCCACCCCGATCATCATGGTCTGCCTGATCTGGCAGTTCACCCAGATCTGGAACGACT
TCCTGTTCGGCGTGGTGTTCTCCAGCGGTGATTCGCAACCGATCACGGTGGCGCTGAACAACCTGGTCAACACCAGCACC
GGGGCCAAGGAATACAACGTGGATATGGCGGCGGCGATGATCGCCGGGCTGCCGACCCTGCTGGTCTATGTGGTCGCAGG
CAAGTATTTCGTGCGCGGGCTGACGGCCGGCGCAGTCAAGGGGTAA

Upstream 100 bases:

>100_bases
GGACAAATGGGCATGGGTTCGGCCAGTGCAATCCTGATGCTCGGTGCGATCCTCGCGATCATCGTGCCTTACCTGTACTC
CGAGCTGAGGACCAAGCGTC

Downstream 100 bases:

>100_bases
TCATGGCTACGCTCGAACTTCGCAATGTAAACAAGACCTACGGTGCCGGCCTGCCGGACACCCTGAAGAACATCGAACTG
TCGATCAAGGACGGTGAGTT

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTSLASKPAISLSRVAIYAVLILAVLLYLVPLVVMLLTSFKTPEDISTGNLLSWPTVVSGIGWVKAWATVDGYFWNSIKI
TVPAVIISTAIGALNGYVLSFWRFRGSQLFFGLLLFGCFLPFQTVLLPASFTLGKMGLASTTTGLVFIHVVYGLAFTTLF
FRNYYVSIPDALIKAARLDGAGFFTIFRQIILPMSTPIIMVCLIWQFTQIWNDFLFGVVFSSGDSQPITVALNNLVNTST
GAKEYNVDMAAAMIAGLPTLLVYVVAGKYFVRGLTAGAVKG

Sequences:

>Translated_281_residues
MTSLASKPAISLSRVAIYAVLILAVLLYLVPLVVMLLTSFKTPEDISTGNLLSWPTVVSGIGWVKAWATVDGYFWNSIKI
TVPAVIISTAIGALNGYVLSFWRFRGSQLFFGLLLFGCFLPFQTVLLPASFTLGKMGLASTTTGLVFIHVVYGLAFTTLF
FRNYYVSIPDALIKAARLDGAGFFTIFRQIILPMSTPIIMVCLIWQFTQIWNDFLFGVVFSSGDSQPITVALNNLVNTST
GAKEYNVDMAAAMIAGLPTLLVYVVAGKYFVRGLTAGAVKG
>Mature_280_residues
TSLASKPAISLSRVAIYAVLILAVLLYLVPLVVMLLTSFKTPEDISTGNLLSWPTVVSGIGWVKAWATVDGYFWNSIKIT
VPAVIISTAIGALNGYVLSFWRFRGSQLFFGLLLFGCFLPFQTVLLPASFTLGKMGLASTTTGLVFIHVVYGLAFTTLFF
RNYYVSIPDALIKAARLDGAGFFTIFRQIILPMSTPIIMVCLIWQFTQIWNDFLFGVVFSSGDSQPITVALNNLVNTSTG
AKEYNVDMAAAMIAGLPTLLVYVVAGKYFVRGLTAGAVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=281, Percent_Identity=28.8256227758007, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1789860, Length=217, Percent_Identity=25.3456221198157, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790464, Length=217, Percent_Identity=30.4147465437788, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30504; Mature: 30372

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLASKPAISLSRVAIYAVLILAVLLYLVPLVVMLLTSFKTPEDISTGNLLSWPTVVSG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
IGWVKAWATVDGYFWNSIKITVPAVIISTAIGALNGYVLSFWRFRGSQLFFGLLLFGCFL
HHHHHHHHHHCCEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
PFQTVLLPASFTLGKMGLASTTTGLVFIHVVYGLAFTTLFFRNYYVSIPDALIKAARLDG
HHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
AGFFTIFRQIILPMSTPIIMVCLIWQFTQIWNDFLFGVVFSSGDSQPITVALNNLVNTST
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCC
GAKEYNVDMAAAMIAGLPTLLVYVVAGKYFVRGLTAGAVKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSLASKPAISLSRVAIYAVLILAVLLYLVPLVVMLLTSFKTPEDISTGNLLSWPTVVSG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
IGWVKAWATVDGYFWNSIKITVPAVIISTAIGALNGYVLSFWRFRGSQLFFGLLLFGCFL
HHHHHHHHHHCCEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
PFQTVLLPASFTLGKMGLASTTTGLVFIHVVYGLAFTTLFFRNYYVSIPDALIKAARLDG
HHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
AGFFTIFRQIILPMSTPIIMVCLIWQFTQIWNDFLFGVVFSSGDSQPITVALNNLVNTST
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCC
GAKEYNVDMAAAMIAGLPTLLVYVVAGKYFVRGLTAGAVKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]