| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is sprT [H]
Identifier: 77460455
GI number: 77460455
Start: 4775482
End: 4775976
Strand: Direct
Name: sprT [H]
Synonym: Pfl01_4234
Alternate gene names: 77460455
Gene position: 4775482-4775976 (Clockwise)
Preceding gene: 77460454
Following gene: 77460458
Centisome position: 74.17
GC content: 59.19
Gene sequence:
>495_bases ATGCCCGAGCAACTCAATACCCGCGTCGAAGACTGTTTCCAACTCGCTGAATCCTTTTTCAAACGTCCCTTCAAACGCCC CGTGGTGAGCCTCAAGCTGCGCGGGCAAAAAGCCGGAGTCGCGCATCTGCACGAGAACCTGCTGCGCTTCAATCCGCAGC TGTACCGGGAGAACACCGAACATTTCCTCAAGCAGACCGTGGCCCACGAAGTTGCGCACCTGATCGCCCATCAACTGTTC GGCGACCGCATACAGCCCCACGGCGAGGAGTGGCAACTGATCATGCGCGGCGTTTACGAATTGCCGCCGGACCGTTGCCA TACCTATGAAGTCAAACGGCGCAGCGTGACGCGCTACATCTATAAATGCCCGTGTGCGGATAGCGATTTTCCGTTTTCGG CGCAGCGCCATAGTCTGGTCCGGCAGGGGCGGCGCTATCTGTGCCGCCGATGCCGGAACACGCTGGTGTTCAGTGGCGAG ATGCGGGTCGAGTAA
Upstream 100 bases:
>100_bases TTCTCATGCCTTGAATAAACGTCGCGACCATTCGGCAGTTTGGCGATACGCAACGCCGAAAGGTTGCGGCATACTCCAAA TCTCTGGAGATCCATCAAGC
Downstream 100 bases:
>100_bases GTCAGGCGATCACTTTGGCTCGCCGCAATTCGGCAATGCGCTCAACACTCAAGCCCAACTCCCCCAACACCTGATCCGTA TGCTGCCCCAGCGCTGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MPEQLNTRVEDCFQLAESFFKRPFKRPVVSLKLRGQKAGVAHLHENLLRFNPQLYRENTEHFLKQTVAHEVAHLIAHQLF GDRIQPHGEEWQLIMRGVYELPPDRCHTYEVKRRSVTRYIYKCPCADSDFPFSAQRHSLVRQGRRYLCRRCRNTLVFSGE MRVE
Sequences:
>Translated_164_residues MPEQLNTRVEDCFQLAESFFKRPFKRPVVSLKLRGQKAGVAHLHENLLRFNPQLYRENTEHFLKQTVAHEVAHLIAHQLF GDRIQPHGEEWQLIMRGVYELPPDRCHTYEVKRRSVTRYIYKCPCADSDFPFSAQRHSLVRQGRRYLCRRCRNTLVFSGE MRVE >Mature_163_residues PEQLNTRVEDCFQLAESFFKRPFKRPVVSLKLRGQKAGVAHLHENLLRFNPQLYRENTEHFLKQTVAHEVAHLIAHQLFG DRIQPHGEEWQLIMRGVYELPPDRCHTYEVKRRSVTRYIYKCPCADSDFPFSAQRHSLVRQGRRYLCRRCRNTLVFSGEM RVE
Specific function: Involved In Bola Gene Expression At The Stationary Phase. [C]
COG id: COG3091
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sprT family [H]
Homologues:
Organism=Escherichia coli, GI1789313, Length=146, Percent_Identity=35.6164383561644, Blast_Score=89, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006640 [H]
Pfam domain/function: PF10263 SprT-like [H]
EC number: NA
Molecular weight: Translated: 19540; Mature: 19409
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEQLNTRVEDCFQLAESFFKRPFKRPVVSLKLRGQKAGVAHLHENLLRFNPQLYRENTE CCCHHHHHHHHHHHHHHHHHHCHHHCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHH HFLKQTVAHEVAHLIAHQLFGDRIQPHGEEWQLIMRGVYELPPDRCHTYEVKRRSVTRYI HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YKCPCADSDFPFSAQRHSLVRQGRRYLCRRCRNTLVFSGEMRVE HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCEECC >Mature Secondary Structure PEQLNTRVEDCFQLAESFFKRPFKRPVVSLKLRGQKAGVAHLHENLLRFNPQLYRENTE CCHHHHHHHHHHHHHHHHHHCHHHCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHH HFLKQTVAHEVAHLIAHQLFGDRIQPHGEEWQLIMRGVYELPPDRCHTYEVKRRSVTRYI HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YKCPCADSDFPFSAQRHSLVRQGRRYLCRRCRNTLVFSGEMRVE HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA