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The map label for this gene is yohC [H]

Identifier: 77460454

GI number: 77460454

Start: 4774694

End: 4775323

Strand: Direct

Name: yohC [H]

Synonym: Pfl01_4233

Alternate gene names: 77460454

Gene position: 4774694-4775323 (Clockwise)

Preceding gene: 77460451

Following gene: 77460455

Centisome position: 74.16

GC content: 60.0

Gene sequence:

>630_bases
ATGGCAATAACGAGAGGAGTGACTGGCATGATCCATCACGTAGTGGGACTTTTTACCCACCCCGATCAGGAATGGAAGGA
AATCCGTGGCGACCAGGAAGAAAGCATCAGCCACATGTACCTGACGCACACACTGATTCTGGCGGCGATCCCCGCTGTTT
CGGCATTTATCGGCACGACTCAGGTCGGCTGGGTGATCGGCAACCGCGCACCGGTGATGCTCACCGTCGAAAGCGCGTTG
TGGATGACGATCATGTCTTATCTGGCAATGCTCGGCGGGGTCGCGGTCATGGGTGCATTCGTGCACTGGATGGCCCGCAC
GTATGACGCCAACCCGAGCCTGGCCCGTTGCGTGGCATTTGCCACCTACACCGCGACACCGTTGTTCGTCGGCGGGCTGG
CGGCGCTCTATCCGCACATGTGGCTGGGGATGATCGTCGGCACGGCGGCCATCTGCTACACGGTGTACCTGTTGTATGTG
GGGCTGCCGACCTTCATGAACATTCCGTCCGACGAGGGCTTCCTGTTTTCCAGCTCGGTGCTGGCGGTGGGTCTGGTGGT
GCTGGTCGCCATCATGGCGTTTACTGTGATTGTCTGGGGACTGGGCGTGGGGCCCGTCTACACCAACTAG

Upstream 100 bases:

>100_bases
TGCGGTTAAGACCTTTCTATACTGCGACATAAGGTCGCACACAATCTGAAGACCTGTATTTGCTCGGCCGATTGGCCCGT
AGGCGCTCCGCTGGGGGGCG

Downstream 100 bases:

>100_bases
CGACCGGTTCGTCTCGAGAAGAACAAGATCCGCCAACACAGGCCGCCGCAAGGCGGCCTTCTCATGCCTTGAATAAACGT
CGCGACCATTCGGCAGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MAITRGVTGMIHHVVGLFTHPDQEWKEIRGDQEESISHMYLTHTLILAAIPAVSAFIGTTQVGWVIGNRAPVMLTVESAL
WMTIMSYLAMLGGVAVMGAFVHWMARTYDANPSLARCVAFATYTATPLFVGGLAALYPHMWLGMIVGTAAICYTVYLLYV
GLPTFMNIPSDEGFLFSSSVLAVGLVVLVAIMAFTVIVWGLGVGPVYTN

Sequences:

>Translated_209_residues
MAITRGVTGMIHHVVGLFTHPDQEWKEIRGDQEESISHMYLTHTLILAAIPAVSAFIGTTQVGWVIGNRAPVMLTVESAL
WMTIMSYLAMLGGVAVMGAFVHWMARTYDANPSLARCVAFATYTATPLFVGGLAALYPHMWLGMIVGTAAICYTVYLLYV
GLPTFMNIPSDEGFLFSSSVLAVGLVVLVAIMAFTVIVWGLGVGPVYTN
>Mature_208_residues
AITRGVTGMIHHVVGLFTHPDQEWKEIRGDQEESISHMYLTHTLILAAIPAVSAFIGTTQVGWVIGNRAPVMLTVESALW
MTIMSYLAMLGGVAVMGAFVHWMARTYDANPSLARCVAFATYTATPLFVGGLAALYPHMWLGMIVGTAAICYTVYLLYVG
LPTFMNIPSDEGFLFSSSVLAVGLVVLVAIMAFTVIVWGLGVGPVYTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082055, Length=190, Percent_Identity=52.6315789473684, Blast_Score=187, Evalue=5e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006977 [H]

Pfam domain/function: PF04893 Yip1 [H]

EC number: NA

Molecular weight: Translated: 22565; Mature: 22434

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITRGVTGMIHHVVGLFTHPDQEWKEIRGDQEESISHMYLTHTLILAAIPAVSAFIGTT
CCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVGWVIGNRAPVMLTVESALWMTIMSYLAMLGGVAVMGAFVHWMARTYDANPSLARCVAF
HHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ATYTATPLFVGGLAALYPHMWLGMIVGTAAICYTVYLLYVGLPTFMNIPSDEGFLFSSSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEHHHH
LAVGLVVLVAIMAFTVIVWGLGVGPVYTN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AITRGVTGMIHHVVGLFTHPDQEWKEIRGDQEESISHMYLTHTLILAAIPAVSAFIGTT
CCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVGWVIGNRAPVMLTVESALWMTIMSYLAMLGGVAVMGAFVHWMARTYDANPSLARCVAF
HHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ATYTATPLFVGGLAALYPHMWLGMIVGTAAICYTVYLLYVGLPTFMNIPSDEGFLFSSSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEHHHH
LAVGLVVLVAIMAFTVIVWGLGVGPVYTN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]