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The map label for this gene is ytjP [H]

Identifier: 77460411

GI number: 77460411

Start: 4727087

End: 4728826

Strand: Direct

Name: ytjP [H]

Synonym: Pfl01_4190

Alternate gene names: 77460411

Gene position: 4727087-4728826 (Clockwise)

Preceding gene: 77460410

Following gene: 77460412

Centisome position: 73.42

GC content: 59.08

Gene sequence:

>1740_bases
ATGGACTTTTCACTCAAGCAACTGGCCGCGTCGACACTGATTCTGGCCAGCCTTTCGTCTGTCACACTGCCAGCCCACGC
CAACCTTACCGAGCAGCAGAGTGCGACCATCCTCAAGACATTCAATGAGGCAAAGGTCAGTGATTTCAGAGCGTTTCTCG
GCGATCTGGCCAAGAACGACCTGAGCAAGGCCGACGATTTGCGTCCGGCCATCAGCGCCTTTCTCGACAACAAGGCGCTG
ACCACCGAACAGCAGAACGAAATCCATCGCCTGCTCGGCCTCTACACTCGCGTGAAGTACGGCAAAGCTGCGCTGGAAAC
CCTGCGTGAACTGGTGGAAATCCCGACCTTCCGCAAGGACGGTGTCGACCAGCACGACAATCCCGAATTCATCAAGATCG
CCAGCAAGATCAAGGATCTGGCCGAGTCTTTCGGCCTGAACTACCGCAACATCGACAACCGCGTCTACGAAATCTCCCTC
GACGGCAGCGGCAAGGACGTAGTCGGCATTCATGCTCACGCCGACGTGGTGCCGGTAACGCCGGAGAACTGGGTGCTGAA
GGACGGCACCAAACTTGATCCGTTCAAGGTCACGCTGATCGGCGACCGCATGTACGGCCGCGGCACCGAGGACGATAAAA
ACGGCATCGTCGTGACGCTGTATGCCATGAAGGTGATCAAGGAAGAGAAGCTGCCACTGGCGCGCAATTTCAAACTGCTG
GTAGACACCACCGAAGAAACCACCGGCGACGCGATTCCTTACTACTTCGAACGCAACCCAACGCCGGAGTACAACCTGGC
ACTGGACGGTGGCTACCCGGTAGTGATTGCCGAGAAAGGCTACGGCACGGTCATGGCCAAGTTCGCCAAGCGCAAAGCCG
AGGGCAAAGGCGCAGAACTCATCTCGATGACCGGTGGCCTGGCGACCAACCAGATCCCTTCGGTTTCGGTCGTCACGCTG
GTGACCGACAAACCCGCCGACCTGGCGGCCAGCCTGCAAAAGGCCGGCACCGAATACGCCAAGCGCAATGGCGGCGATTT
TGAAGTGAACGCCAAGGTCGATGGCAAAGACGTCAAACTTACCGTCACCGGTGTTTCCGCGCACTCGTCCGAGCCAGAGT
CCGGCGTCAACCCGGTCGCTCGCATGCTCGATTTCATCCACAGCGTGGACGGCAAGATCGCCTTCAAGCACAACCACATC
ACCGACGCTGCGCACTACGCCGCCGACAACTGGGGCCTGGATTACAAGGGCGGCAAGCTGGGTGTCGGGTTCGCGGATAG
CTTCATGGGGCCGCTGACCACGTCCCTGACCTACGTCGGCATGGACGACAAAACCTTCAAACTCGCGGTCAACCTGCGCG
TGCCGAAGGGCAAGTCGCCGGAAGTGCTCAAAACAGAAATCGCCGACAAACTCGCGGCCTGGAGCAAGAAAAACCATGTC
GCAGTGAACTTCGACTACTCGATTGCCGAACCGATGTATCGCAACCCGGAAGGCGAATGGGTCAAGGCGCTGCTGGCCGT
GGCCACCGAAAACCTGGGCATGAAACACGAATTCGGTACCTCGGCCGGCGCCACCTCGGTGCATGAACTGCCCAACGGTG
TGCAGTTCGGCCTGGCACGACCTGAGGTCAAGTACACCGGTCACACCGACGGCGAGTTCAAGACCGTTGACCAGTTCCTG
CTGGACCTGCAGATCGTCACCGAAATGATGGGACGCATCGGGCAGCTGCCGAAGCTCTGA

Upstream 100 bases:

>100_bases
GGGCTCCCCTATCACTCGCTGGTGGTGTTAGTTTGCGAAACCGTCTGACGCATCGATCAGACACTTCCTACTCACTGCCT
GCAAAGGAATGCCCTTAGCA

Downstream 100 bases:

>100_bases
TCGCGTGTCGGGCCCGCCAGATTGGCGGGCCCACAAAAAAAGGACCGCGAGGTCCTTTTCTAGTGCCTGACAAAAAATGC
ACAAACAAAAACGCCGCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MDFSLKQLAASTLILASLSSVTLPAHANLTEQQSATILKTFNEAKVSDFRAFLGDLAKNDLSKADDLRPAISAFLDNKAL
TTEQQNEIHRLLGLYTRVKYGKAALETLRELVEIPTFRKDGVDQHDNPEFIKIASKIKDLAESFGLNYRNIDNRVYEISL
DGSGKDVVGIHAHADVVPVTPENWVLKDGTKLDPFKVTLIGDRMYGRGTEDDKNGIVVTLYAMKVIKEEKLPLARNFKLL
VDTTEETTGDAIPYYFERNPTPEYNLALDGGYPVVIAEKGYGTVMAKFAKRKAEGKGAELISMTGGLATNQIPSVSVVTL
VTDKPADLAASLQKAGTEYAKRNGGDFEVNAKVDGKDVKLTVTGVSAHSSEPESGVNPVARMLDFIHSVDGKIAFKHNHI
TDAAHYAADNWGLDYKGGKLGVGFADSFMGPLTTSLTYVGMDDKTFKLAVNLRVPKGKSPEVLKTEIADKLAAWSKKNHV
AVNFDYSIAEPMYRNPEGEWVKALLAVATENLGMKHEFGTSAGATSVHELPNGVQFGLARPEVKYTGHTDGEFKTVDQFL
LDLQIVTEMMGRIGQLPKL

Sequences:

>Translated_579_residues
MDFSLKQLAASTLILASLSSVTLPAHANLTEQQSATILKTFNEAKVSDFRAFLGDLAKNDLSKADDLRPAISAFLDNKAL
TTEQQNEIHRLLGLYTRVKYGKAALETLRELVEIPTFRKDGVDQHDNPEFIKIASKIKDLAESFGLNYRNIDNRVYEISL
DGSGKDVVGIHAHADVVPVTPENWVLKDGTKLDPFKVTLIGDRMYGRGTEDDKNGIVVTLYAMKVIKEEKLPLARNFKLL
VDTTEETTGDAIPYYFERNPTPEYNLALDGGYPVVIAEKGYGTVMAKFAKRKAEGKGAELISMTGGLATNQIPSVSVVTL
VTDKPADLAASLQKAGTEYAKRNGGDFEVNAKVDGKDVKLTVTGVSAHSSEPESGVNPVARMLDFIHSVDGKIAFKHNHI
TDAAHYAADNWGLDYKGGKLGVGFADSFMGPLTTSLTYVGMDDKTFKLAVNLRVPKGKSPEVLKTEIADKLAAWSKKNHV
AVNFDYSIAEPMYRNPEGEWVKALLAVATENLGMKHEFGTSAGATSVHELPNGVQFGLARPEVKYTGHTDGEFKTVDQFL
LDLQIVTEMMGRIGQLPKL
>Mature_579_residues
MDFSLKQLAASTLILASLSSVTLPAHANLTEQQSATILKTFNEAKVSDFRAFLGDLAKNDLSKADDLRPAISAFLDNKAL
TTEQQNEIHRLLGLYTRVKYGKAALETLRELVEIPTFRKDGVDQHDNPEFIKIASKIKDLAESFGLNYRNIDNRVYEISL
DGSGKDVVGIHAHADVVPVTPENWVLKDGTKLDPFKVTLIGDRMYGRGTEDDKNGIVVTLYAMKVIKEEKLPLARNFKLL
VDTTEETTGDAIPYYFERNPTPEYNLALDGGYPVVIAEKGYGTVMAKFAKRKAEGKGAELISMTGGLATNQIPSVSVVTL
VTDKPADLAASLQKAGTEYAKRNGGDFEVNAKVDGKDVKLTVTGVSAHSSEPESGVNPVARMLDFIHSVDGKIAFKHNHI
TDAAHYAADNWGLDYKGGKLGVGFADSFMGPLTTSLTYVGMDDKTFKLAVNLRVPKGKSPEVLKTEIADKLAAWSKKNHV
AVNFDYSIAEPMYRNPEGEWVKALLAVATENLGMKHEFGTSAGATSVHELPNGVQFGLARPEVKYTGHTDGEFKTVDQFL
LDLQIVTEMMGRIGQLPKL

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010964
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 63244; Mature: 63244

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSLKQLAASTLILASLSSVTLPAHANLTEQQSATILKTFNEAKVSDFRAFLGDLAKND
CCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LSKADDLRPAISAFLDNKALTTEQQNEIHRLLGLYTRVKYGKAALETLRELVEIPTFRKD
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GVDQHDNPEFIKIASKIKDLAESFGLNYRNIDNRVYEISLDGSGKDVVGIHAHADVVPVT
CCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCEEEEEECCCEEECC
PENWVLKDGTKLDPFKVTLIGDRMYGRGTEDDKNGIVVTLYAMKVIKEEKLPLARNFKLL
CCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCEEE
VDTTEETTGDAIPYYFERNPTPEYNLALDGGYPVVIAEKGYGTVMAKFAKRKAEGKGAEL
EECCCCCCCCCCCEEECCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHCCCCCCEE
ISMTGGLATNQIPSVSVVTLVTDKPADLAASLQKAGTEYAKRNGGDFEVNAKVDGKDVKL
EEECCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEE
TVTGVSAHSSEPESGVNPVARMLDFIHSVDGKIAFKHNHITDAAHYAADNWGLDYKGGKL
EEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCEE
GVGFADSFMGPLTTSLTYVGMDDKTFKLAVNLRVPKGKSPEVLKTEIADKLAAWSKKNHV
ECCHHHHHCCCHHHCEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCE
AVNFDYSIAEPMYRNPEGEWVKALLAVATENLGMKHEFGTSAGATSVHELPNGVQFGLAR
EEEECHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCEECCCC
PEVKYTGHTDGEFKTVDQFLLDLQIVTEMMGRIGQLPKL
CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDFSLKQLAASTLILASLSSVTLPAHANLTEQQSATILKTFNEAKVSDFRAFLGDLAKND
CCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LSKADDLRPAISAFLDNKALTTEQQNEIHRLLGLYTRVKYGKAALETLRELVEIPTFRKD
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GVDQHDNPEFIKIASKIKDLAESFGLNYRNIDNRVYEISLDGSGKDVVGIHAHADVVPVT
CCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCEEEEEECCCEEECC
PENWVLKDGTKLDPFKVTLIGDRMYGRGTEDDKNGIVVTLYAMKVIKEEKLPLARNFKLL
CCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCEEE
VDTTEETTGDAIPYYFERNPTPEYNLALDGGYPVVIAEKGYGTVMAKFAKRKAEGKGAEL
EECCCCCCCCCCCEEECCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHCCCCCCEE
ISMTGGLATNQIPSVSVVTLVTDKPADLAASLQKAGTEYAKRNGGDFEVNAKVDGKDVKL
EEECCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEE
TVTGVSAHSSEPESGVNPVARMLDFIHSVDGKIAFKHNHITDAAHYAADNWGLDYKGGKL
EEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCEE
GVGFADSFMGPLTTSLTYVGMDDKTFKLAVNLRVPKGKSPEVLKTEIADKLAAWSKKNHV
ECCHHHHHCCCHHHCEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCE
AVNFDYSIAEPMYRNPEGEWVKALLAVATENLGMKHEFGTSAGATSVHELPNGVQFGLAR
EEEECHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCEECCCC
PEVKYTGHTDGEFKTVDQFLLDLQIVTEMMGRIGQLPKL
CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]