| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yliJ [H]
Identifier: 77460403
GI number: 77460403
Start: 4719115
End: 4719798
Strand: Reverse
Name: yliJ [H]
Synonym: Pfl01_4182
Alternate gene names: 77460403
Gene position: 4719798-4719115 (Counterclockwise)
Preceding gene: 77460404
Following gene: 77460402
Centisome position: 73.31
GC content: 60.67
Gene sequence:
>684_bases ATGTCGGCCGCTTCTGATCCGGCGTATGCTGCCTGCCCATTTACTGGAAAAGAGGCGGACATGCTGAAGATCTGGGGTCG CAAGAATTCGTCGAATGTCAGAAAACCGTTGTGGGCGGCCGAAGAGCTCGGGCTGGCCTACGAGGCCATCGATGCCGGTG GCGCGTTTGGTGTGGTCGACACGCCGGAGTATCGGGCGATGAACCCGAACGGGCGGGTGCCGGTGATTCAGGACGACGGT TTCGTGTTGTGGGAATCGAATGCCATCGTGCGTTACCTGCTGGCAAAACATGCGGCCGATACCTCGTGGTACCCGGCGGA TCCGCAGACCCGCGCCACCGCCGACAAGTGGATGGACTGGACGACTTCCAGTTTCGCAGGGCCGTTTCGCACGGTGTTCT GGGGCGTTTTGCGTACCCCGGCAGACAAGCAGGACTGGCCGGCAATCCATGCGGCGATCAAGGAGTGCGACAGCTTGCTG GCGATGGCCGATCAGGCGCTGAAGCACCAGCCTTATCTGTCCGGGAGTGAAATCGGCATGGGCGATATCCCGCTCGGCAG TTTCATTTATGCCTGGTTCGAGATGCCGATCGAACGCGCGCCACAGCCCAATCTCGAAGCCTGGTACGCGCGGTTGAAGC AGCGTCCGGCGTATCAGAAAGCCGTCATGACCGCGTTGACTTAA
Upstream 100 bases:
>100_bases GCTGATGTACCGGAATCTTTTTTCTTCGAGCATCTGCAGAAATGTTATCCGCACCTGTTCAACGATCAGCAGACGCCCCT GTCCAGTGACATGCGTGGTG
Downstream 100 bases:
>100_bases TACCTACTATCGACACACTTGACTGTACTTGTGCGGCGACGGCAAGCACCATTGCGCTCGAGCGCTGCGGTTGTCTTCCT CGCCGCCGGCTTTTTATCAG
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSAASDPAYAACPFTGKEADMLKIWGRKNSSNVRKPLWAAEELGLAYEAIDAGGAFGVVDTPEYRAMNPNGRVPVIQDDG FVLWESNAIVRYLLAKHAADTSWYPADPQTRATADKWMDWTTSSFAGPFRTVFWGVLRTPADKQDWPAIHAAIKECDSLL AMADQALKHQPYLSGSEIGMGDIPLGSFIYAWFEMPIERAPQPNLEAWYARLKQRPAYQKAVMTALT
Sequences:
>Translated_227_residues MSAASDPAYAACPFTGKEADMLKIWGRKNSSNVRKPLWAAEELGLAYEAIDAGGAFGVVDTPEYRAMNPNGRVPVIQDDG FVLWESNAIVRYLLAKHAADTSWYPADPQTRATADKWMDWTTSSFAGPFRTVFWGVLRTPADKQDWPAIHAAIKECDSLL AMADQALKHQPYLSGSEIGMGDIPLGSFIYAWFEMPIERAPQPNLEAWYARLKQRPAYQKAVMTALT >Mature_226_residues SAASDPAYAACPFTGKEADMLKIWGRKNSSNVRKPLWAAEELGLAYEAIDAGGAFGVVDTPEYRAMNPNGRVPVIQDDGF VLWESNAIVRYLLAKHAADTSWYPADPQTRATADKWMDWTTSSFAGPFRTVFWGVLRTPADKQDWPAIHAAIKECDSLLA MADQALKHQPYLSGSEIGMGDIPLGSFIYAWFEMPIERAPQPNLEAWYARLKQRPAYQKAVMTALT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI4504187, Length=170, Percent_Identity=27.0588235294118, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI124249394, Length=170, Percent_Identity=27.0588235294118, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI87081789, Length=209, Percent_Identity=44.9760765550239, Blast_Score=180, Evalue=5e-47, Organism=Escherichia coli, GI1788640, Length=193, Percent_Identity=28.4974093264249, Blast_Score=61, Evalue=5e-11, Organism=Drosophila melanogaster, GI19922532, Length=208, Percent_Identity=29.8076923076923, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI17864598, Length=153, Percent_Identity=30.718954248366, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI17864594, Length=187, Percent_Identity=27.807486631016, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI19922526, Length=203, Percent_Identity=29.064039408867, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24654983, Length=207, Percent_Identity=28.9855072463768, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI17864596, Length=188, Percent_Identity=22.8723404255319, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24654975, Length=205, Percent_Identity=26.8292682926829, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI24654965, Length=207, Percent_Identity=26.0869565217391, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI20130115, Length=205, Percent_Identity=25.3658536585366, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI17864592, Length=181, Percent_Identity=24.8618784530387, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI45549270, Length=155, Percent_Identity=25.1612903225806, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI24646251, Length=194, Percent_Identity=28.3505154639175, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI24654992, Length=205, Percent_Identity=24.8780487804878, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI17933730, Length=175, Percent_Identity=27.4285714285714, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24646249, Length=200, Percent_Identity=24.5, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI19922528, Length=214, Percent_Identity=26.6355140186916, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24654996, Length=205, Percent_Identity=28.2926829268293, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI85725204, Length=196, Percent_Identity=25, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI17737923, Length=196, Percent_Identity=25, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24654979, Length=207, Percent_Identity=24.1545893719807, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 25206; Mature: 25075
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAASDPAYAACPFTGKEADMLKIWGRKNSSNVRKPLWAAEELGLAYEAIDAGGAFGVVD CCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCC TPEYRAMNPNGRVPVIQDDGFVLWESNAIVRYLLAKHAADTSWYPADPQTRATADKWMDW CCCCEEECCCCCEEEEECCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC TTSSFAGPFRTVFWGVLRTPADKQDWPAIHAAIKECDSLLAMADQALKHQPYLSGSEIGM CHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GDIPLGSFIYAWFEMPIERAPQPNLEAWYARLKQRPAYQKAVMTALT CCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure SAASDPAYAACPFTGKEADMLKIWGRKNSSNVRKPLWAAEELGLAYEAIDAGGAFGVVD CCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCCCCC TPEYRAMNPNGRVPVIQDDGFVLWESNAIVRYLLAKHAADTSWYPADPQTRATADKWMDW CCCCEEECCCCCEEEEECCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC TTSSFAGPFRTVFWGVLRTPADKQDWPAIHAAIKECDSLLAMADQALKHQPYLSGSEIGM CHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GDIPLGSFIYAWFEMPIERAPQPNLEAWYARLKQRPAYQKAVMTALT CCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]