| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yheU [C]
Identifier: 77460324
GI number: 77460324
Start: 4646851
End: 4647078
Strand: Direct
Name: yheU [C]
Synonym: Pfl01_4103
Alternate gene names: 77460324
Gene position: 4646851-4647078 (Clockwise)
Preceding gene: 77460323
Following gene: 77460328
Centisome position: 72.17
GC content: 59.65
Gene sequence:
>228_bases ATGCTGATTCCCTACGACGCGCTTGAAGTCGACACCCTCACCCGCCTGATCGAGGATTTCGTCACCCGCGACGGTACCGA CAACGGTGACGACACGCCGCTGGAAACTCGCGTACTGCGGGTTCGCCAGGCGCTGACCAAAGGCCAGGCGTTGATTGTCT TCGATCCGGAAAGCGAGCAATGCCAGTTGATGCTCAAGCACGACGTGCCCAAGCACCTGTTCGACTGA
Upstream 100 bases:
>100_bases CGTCGGTGGACAGCCTGGTGGGGCAACGCTCGGACAGTTGAGTCTGGCCCTCGGCGATCATTCGCCGTAGCATCCCGACA TTGATTTAGCCGAGGTGCCC
Downstream 100 bases:
>100_bases AAACGGTCAGCGGCCCTTGCCGCTGGCCTGTTTGCGCTGGATCCGTTCGTAGACCTCGGCGCGATGCACGCCGACCTGCT CCGGCGCTTCGACGCCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MLIPYDALEVDTLTRLIEDFVTRDGTDNGDDTPLETRVLRVRQALTKGQALIVFDPESEQCQLMLKHDVPKHLFD
Sequences:
>Translated_75_residues MLIPYDALEVDTLTRLIEDFVTRDGTDNGDDTPLETRVLRVRQALTKGQALIVFDPESEQCQLMLKHDVPKHLFD >Mature_75_residues MLIPYDALEVDTLTRLIEDFVTRDGTDNGDDTPLETRVLRVRQALTKGQALIVFDPESEQCQLMLKHDVPKHLFD
Specific function: Unknown
COG id: COG3089
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0270 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4103_PSEPF (Q3K8R4)
Other databases:
- EMBL: CP000094 - RefSeq: YP_349831.1 - HSSP: Q9HYE3 - ProteinModelPortal: Q3K8R4 - SMR: Q3K8R4 - STRING: Q3K8R4 - GeneID: 3712407 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_4103 - eggNOG: COG3089 - HOGENOM: HBG678569 - OMA: QCQLMLK - ProtClustDB: PRK00304 - BioCyc: PFLU205922:PFL_4103-MONOMER - HAMAP: MF_00690 - InterPro: IPR010648 - Gene3D: G3DSA:1.10.10.610 - PIRSF: PIRSF006169 - ProDom: PD026997
Pfam domain/function: PF06794 UPF0270
EC number: NA
Molecular weight: Translated: 8598; Mature: 8598
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIPYDALEVDTLTRLIEDFVTRDGTDNGDDTPLETRVLRVRQALTKGQALIVFDPESEQ CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHH CQLMLKHDVPKHLFD HHHHHHCCCCHHHCC >Mature Secondary Structure MLIPYDALEVDTLTRLIEDFVTRDGTDNGDDTPLETRVLRVRQALTKGQALIVFDPESEQ CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHH CQLMLKHDVPKHLFD HHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA