| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460318
Identifier: 77460318
GI number: 77460318
Start: 4633199
End: 4634713
Strand: Reverse
Name: 77460318
Synonym: Pfl01_4097
Alternate gene names: NA
Gene position: 4634713-4633199 (Counterclockwise)
Preceding gene: 77460320
Following gene: 77460317
Centisome position: 71.99
GC content: 60.79
Gene sequence:
>1515_bases ATGTTCGAATCCGCTGAAATCGGTCACGCCATCGACAAAGACACCTACGAAGCCGCCGTGCCCGCCCTGCGTGAAGCGTT GCTTGAAGCCCAGTTCGAGTTGCAGCAGCAAAAGCGTTTCCCGGTGATCGTTTTGATCAACGGTATCGAAGGCGCCGGCA AGGGCGAGACGGTGAAGTTGCTCAACGAGTGGATGGATCCGCGCCTGATCGAAGTACGCACCTTCGATCAACAGACCGAT GAAGAGCTGGCGCGGCCTCCAGCCTGGCGTTACTGGCGGATGCTGCCGGCCAAGGGGCGGATGGGGATTTTCTTCGGCAA CTGGTACAGCCAGATGCTGCAGGGCCGGGTGCACGGCTTGTTCAAGGATCCGCGACTGGATCAGGCGATTGCCGGCGCCG AGCGCATGGAAAAGATGTTCTGCGATGAAGGCGCGCTGATCTTCAAGTTCTGGTTCCACCTGTCCAAGAAGCAGATGAAG GCGCGGCTCAAGGCGCTGGCCGATGACCCTCTGCACAGCTGGCGCATCAGTCCGCTGGACTGGCAGCAGTCGCAAACCTA CGACAAGTTCGTCAAGTACGGCGAGCGCGTGTTGCGCCGCACCAGTCGCGATTACGCGCCGTGGCATGTCATCGAGGGTG TCGACCCGTATTACCGCAGTCTGACGGTCGGCAAGATTCTGCTCGAAGGTCTGCAAAACGCTTTGAAGCGTCCCGATGTG CATCCCCATGAGGTCAACGCTGCACCGCTGGGGACTTCCGTAGACCAGTTGAACCTGCTCGATAGCCTCGACCTGACCCA GCGTCTTGAGAAGAAAGACTACGAAGAACAACTGATCACCGAACAGGCGCGGCTGTCCGGCCTGATGCGTGACAAACGCA TGCGCCGGCATGCGCTGGTGGCCGTGTTCGAAGGTAACGATGCGGCGGGCAAGGGCGGTTCGATTCGCCGGGTCGCGGCG GCGCTCGATCCGCGCCAATACAGCATCGTGCCGATTGCCGCACCGACCGAAGAAGAGCGGGCGCAGCCTTATCTGTGGCG GTTCTGGCGGCACATTCCGGCGCGGGGCAAATTCACCGTGTTCGACCGCTCGTGGTACGGGCGGGTGCTGGTGGAGCGGG TTGAGGGCTTTTGCAGCACCGCCGACTGGATGCGCGCCTATGGCGAGATCAATGACTTTGAGGAGCAACTGGCCGATGCC GGGGTGATCGTGGTCAAGTTCTGGCTGGCGATCGACAAGGACACGCAGATGGAGCGGTTCCAGGAGCGCGAAGAAATCCC GTTCAAGCGCTTCAAGATCACCGAAGACGACTGGCGCAACCGTGACAAGTGGGACGCTTATCGCGCCGCCGTGGGCGACA TGGTCGATCGCACCAGCACCGAAATTGCCCCGTGGACGCTGGTCGAGGCCAATGACAAGCGCTGGGCCCGGGTCAAGGTG TTGCGCACGATCAATCGTGCCCTGGAAGAGGCTTTCGAAAAATCCGACAAGCGAGCCAAGAAGCACAAGGACTGA
Upstream 100 bases:
>100_bases GCCACAGATGACTCAAGGACAATCCGCCGCCGGCGGGAATTTCTGTGCCGCGTCAGAGCCCAATCCGCTAGTCTTGCTGA ATCCTGGAAGGAGCCGTCCC
Downstream 100 bases:
>100_bases ACCGATGGGCCCGCATACGCGAGGTGAATGATTGTCGCGGTCGGCGATTGGGTGGACTTATGCTCGGTCCACTCTCAACC GACTGCAACAATGAGGTATG
Product: polyphosphate:AMP phosphotransferase
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MFESAEIGHAIDKDTYEAAVPALREALLEAQFELQQQKRFPVIVLINGIEGAGKGETVKLLNEWMDPRLIEVRTFDQQTD EELARPPAWRYWRMLPAKGRMGIFFGNWYSQMLQGRVHGLFKDPRLDQAIAGAERMEKMFCDEGALIFKFWFHLSKKQMK ARLKALADDPLHSWRISPLDWQQSQTYDKFVKYGERVLRRTSRDYAPWHVIEGVDPYYRSLTVGKILLEGLQNALKRPDV HPHEVNAAPLGTSVDQLNLLDSLDLTQRLEKKDYEEQLITEQARLSGLMRDKRMRRHALVAVFEGNDAAGKGGSIRRVAA ALDPRQYSIVPIAAPTEEERAQPYLWRFWRHIPARGKFTVFDRSWYGRVLVERVEGFCSTADWMRAYGEINDFEEQLADA GVIVVKFWLAIDKDTQMERFQEREEIPFKRFKITEDDWRNRDKWDAYRAAVGDMVDRTSTEIAPWTLVEANDKRWARVKV LRTINRALEEAFEKSDKRAKKHKD
Sequences:
>Translated_504_residues MFESAEIGHAIDKDTYEAAVPALREALLEAQFELQQQKRFPVIVLINGIEGAGKGETVKLLNEWMDPRLIEVRTFDQQTD EELARPPAWRYWRMLPAKGRMGIFFGNWYSQMLQGRVHGLFKDPRLDQAIAGAERMEKMFCDEGALIFKFWFHLSKKQMK ARLKALADDPLHSWRISPLDWQQSQTYDKFVKYGERVLRRTSRDYAPWHVIEGVDPYYRSLTVGKILLEGLQNALKRPDV HPHEVNAAPLGTSVDQLNLLDSLDLTQRLEKKDYEEQLITEQARLSGLMRDKRMRRHALVAVFEGNDAAGKGGSIRRVAA ALDPRQYSIVPIAAPTEEERAQPYLWRFWRHIPARGKFTVFDRSWYGRVLVERVEGFCSTADWMRAYGEINDFEEQLADA GVIVVKFWLAIDKDTQMERFQEREEIPFKRFKITEDDWRNRDKWDAYRAAVGDMVDRTSTEIAPWTLVEANDKRWARVKV LRTINRALEEAFEKSDKRAKKHKD >Mature_504_residues MFESAEIGHAIDKDTYEAAVPALREALLEAQFELQQQKRFPVIVLINGIEGAGKGETVKLLNEWMDPRLIEVRTFDQQTD EELARPPAWRYWRMLPAKGRMGIFFGNWYSQMLQGRVHGLFKDPRLDQAIAGAERMEKMFCDEGALIFKFWFHLSKKQMK ARLKALADDPLHSWRISPLDWQQSQTYDKFVKYGERVLRRTSRDYAPWHVIEGVDPYYRSLTVGKILLEGLQNALKRPDV HPHEVNAAPLGTSVDQLNLLDSLDLTQRLEKKDYEEQLITEQARLSGLMRDKRMRRHALVAVFEGNDAAGKGGSIRRVAA ALDPRQYSIVPIAAPTEEERAQPYLWRFWRHIPARGKFTVFDRSWYGRVLVERVEGFCSTADWMRAYGEINDFEEQLADA GVIVVKFWLAIDKDTQMERFQEREEIPFKRFKITEDDWRNRDKWDAYRAAVGDMVDRTSTEIAPWTLVEANDKRWARVKV LRTINRALEEAFEKSDKRAKKHKD
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 58866; Mature: 58866
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFESAEIGHAIDKDTYEAAVPALREALLEAQFELQQQKRFPVIVLINGIEGAGKGETVKL CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHH LNEWMDPRLIEVRTFDQQTDEELARPPAWRYWRMLPAKGRMGIFFGNWYSQMLQGRVHGL HHHHCCCEEEEEEECCCHHHHHHHCCCCHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHC FKDPRLDQAIAGAERMEKMFCDEGALIFKFWFHLSKKQMKARLKALADDPLHSWRISPLD CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC WQQSQTYDKFVKYGERVLRRTSRDYAPWHVIEGVDPYYRSLTVGKILLEGLQNALKRPDV CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC HPHEVNAAPLGTSVDQLNLLDSLDLTQRLEKKDYEEQLITEQARLSGLMRDKRMRRHALV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE AVFEGNDAAGKGGSIRRVAAALDPRQYSIVPIAAPTEEERAQPYLWRFWRHIPARGKFTV EEEECCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCHHHCCHHHHHHHHHCCCCCCEEE FDRSWYGRVLVERVEGFCSTADWMRAYGEINDFEEQLADAGVIVVKFWLAIDKDTQMERF ECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEHHHHHHCCCCHHHHHH QEREEIPFKRFKITEDDWRNRDKWDAYRAAVGDMVDRTSTEIAPWTLVEANDKRWARVKV HHHHCCCHHHEECCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHH LRTINRALEEAFEKSDKRAKKHKD HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFESAEIGHAIDKDTYEAAVPALREALLEAQFELQQQKRFPVIVLINGIEGAGKGETVKL CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHH LNEWMDPRLIEVRTFDQQTDEELARPPAWRYWRMLPAKGRMGIFFGNWYSQMLQGRVHGL HHHHCCCEEEEEEECCCHHHHHHHCCCCHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHC FKDPRLDQAIAGAERMEKMFCDEGALIFKFWFHLSKKQMKARLKALADDPLHSWRISPLD CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC WQQSQTYDKFVKYGERVLRRTSRDYAPWHVIEGVDPYYRSLTVGKILLEGLQNALKRPDV CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC HPHEVNAAPLGTSVDQLNLLDSLDLTQRLEKKDYEEQLITEQARLSGLMRDKRMRRHALV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE AVFEGNDAAGKGGSIRRVAAALDPRQYSIVPIAAPTEEERAQPYLWRFWRHIPARGKFTV EEEECCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCHHHCCHHHHHHHHHCCCCCCEEE FDRSWYGRVLVERVEGFCSTADWMRAYGEINDFEEQLADAGVIVVKFWLAIDKDTQMERF ECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEHHHHHHCCCCHHHHHH QEREEIPFKRFKITEDDWRNRDKWDAYRAAVGDMVDRTSTEIAPWTLVEANDKRWARVKV HHHHCCCHHHEECCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHH LRTINRALEEAFEKSDKRAKKHKD HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]