| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is cmk
Identifier: 77460294
GI number: 77460294
Start: 4601394
End: 4602083
Strand: Reverse
Name: cmk
Synonym: Pfl01_4073
Alternate gene names: 77460294
Gene position: 4602083-4601394 (Counterclockwise)
Preceding gene: 77460295
Following gene: 77460293
Centisome position: 71.48
GC content: 60.29
Gene sequence:
>690_bases GTGAACAACATTGCACCGGTCATCACCATCGACGGGCCAAGCGGCTCGGGCAAAGGCACCGTAGCCGGGATTCTGGCCAA GCGTCTTGGCTGGAACCTGCTGGACTCCGGTGCGTTGTATCGCCTGCTGGCGTTCGCGGCGCACAACCATGGTGTCGACC TGACCAATGAAGAGTTGCTGAAGAAACTGGCCGCTCATCTGGATGTGCAGTTCATCGCGGCGACCGACGGTCAGTTGCAA CGCATCATTCTGGAAGGTGACGAAGTCAGCGATGTCATCCGCACTGAAAGCGTCGGTTCCGGCGCTTCTCAGGTGGCGGC ATTGCCGGCTGTACGCGAAGCGCTGTTGCAGCGCCAGCGTGCTTTTCAGGAAGCCCCTGGCCTGGTGGCCGATGGTCGCG ACATGGGTACGGTAGTATTTCCGAATGCCCCCCTGAAGATTTTCCTGACCGCCAGTGCCGAGGAGAGGGCGCGCCGTCGA TATTTGCAGTTGAAGGGCAAAGTCGAGGGTGTTAGTCTGTCGAGTCTGCTAGATGAGATCCGTGCGCGCGACGAGCGTGA TACCCAGCGAGCGGTGGCCCCGCTCAAGCCGGCGGCTGACGCCATACAGCTGGATTCCACGGAGTTGTCCATCGATCAGG TGCTTGAACGCATCATGAGCGAGATCGCCATTCGCGATATCGCCGGGTGA
Upstream 100 bases:
>100_bases CGATCCGCATCCATGACTGCGCCAACGTCGCGACATCGTTCCCGAACTTCCTGGCGCTCTGCGCGCAGGTCGGCATTCGT GTGGCGCAAGAGGCTCAGTC
Downstream 100 bases:
>100_bases CCAAGAAGGCCGCAGGGGACCAGTCATAGTCCTGTGGCGCTTCTTTTAAATGAAACTAACCCACATTGTCTGGGATGTGG AGATGGGCGTATTTTTCGCC
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MNNIAPVITIDGPSGSGKGTVAGILAKRLGWNLLDSGALYRLLAFAAHNHGVDLTNEELLKKLAAHLDVQFIAATDGQLQ RIILEGDEVSDVIRTESVGSGASQVAALPAVREALLQRQRAFQEAPGLVADGRDMGTVVFPNAPLKIFLTASAEERARRR YLQLKGKVEGVSLSSLLDEIRARDERDTQRAVAPLKPAADAIQLDSTELSIDQVLERIMSEIAIRDIAG
Sequences:
>Translated_229_residues MNNIAPVITIDGPSGSGKGTVAGILAKRLGWNLLDSGALYRLLAFAAHNHGVDLTNEELLKKLAAHLDVQFIAATDGQLQ RIILEGDEVSDVIRTESVGSGASQVAALPAVREALLQRQRAFQEAPGLVADGRDMGTVVFPNAPLKIFLTASAEERARRR YLQLKGKVEGVSLSSLLDEIRARDERDTQRAVAPLKPAADAIQLDSTELSIDQVLERIMSEIAIRDIAG >Mature_229_residues MNNIAPVITIDGPSGSGKGTVAGILAKRLGWNLLDSGALYRLLAFAAHNHGVDLTNEELLKKLAAHLDVQFIAATDGQLQ RIILEGDEVSDVIRTESVGSGASQVAALPAVREALLQRQRAFQEAPGLVADGRDMGTVVFPNAPLKIFLTASAEERARRR YLQLKGKVEGVSLSSLLDEIRARDERDTQRAVAPLKPAADAIQLDSTELSIDQVLERIMSEIAIRDIAG
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1787139, Length=219, Percent_Identity=63.4703196347032, Blast_Score=271, Evalue=4e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KCY_PSEPF (Q3K8U4)
Other databases:
- EMBL: CP000094 - RefSeq: YP_349801.1 - HSSP: P0A6I0 - ProteinModelPortal: Q3K8U4 - SMR: Q3K8U4 - STRING: Q3K8U4 - GeneID: 3712318 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_4073 - eggNOG: COG0283 - HOGENOM: HBG354377 - OMA: DIGTVIC - ProtClustDB: PRK00023 - BioCyc: PFLU205922:PFL_4073-MONOMER - GO: GO:0005737 - HAMAP: MF_00238 - InterPro: IPR003136 - InterPro: IPR011994 - PANTHER: PTHR21299:SF2 - TIGRFAMs: TIGR00017
Pfam domain/function: PF02224 Cytidylate_kin
EC number: =2.7.4.14
Molecular weight: Translated: 24595; Mature: 24595
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIAPVITIDGPSGSGKGTVAGILAKRLGWNLLDSGALYRLLAFAAHNHGVDLTNEELL CCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCCCCCHHHHH KKLAAHLDVQFIAATDGQLQRIILEGDEVSDVIRTESVGSGASQVAALPAVREALLQRQR HHHHHHCCEEEEEECCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AFQEAPGLVADGRDMGTVVFPNAPLKIFLTASAEERARRRYLQLKGKVEGVSLSSLLDEI HHHHCCCCEECCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHH RARDERDTQRAVAPLKPAADAIQLDSTELSIDQVLERIMSEIAIRDIAG HCCCCHHHHHHHCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNIAPVITIDGPSGSGKGTVAGILAKRLGWNLLDSGALYRLLAFAAHNHGVDLTNEELL CCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCCCCCHHHHH KKLAAHLDVQFIAATDGQLQRIILEGDEVSDVIRTESVGSGASQVAALPAVREALLQRQR HHHHHHCCEEEEEECCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AFQEAPGLVADGRDMGTVVFPNAPLKIFLTASAEERARRRYLQLKGKVEGVSLSSLLDEI HHHHCCCCEECCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHH RARDERDTQRAVAPLKPAADAIQLDSTELSIDQVLERIMSEIAIRDIAG HCCCCHHHHHHHCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA