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The map label for this gene is ycbX [H]

Identifier: 77460174

GI number: 77460174

Start: 4480588

End: 4481394

Strand: Reverse

Name: ycbX [H]

Synonym: Pfl01_3953

Alternate gene names: 77460174

Gene position: 4481394-4480588 (Counterclockwise)

Preceding gene: 77460175

Following gene: 77460165

Centisome position: 69.6

GC content: 62.7

Gene sequence:

>807_bases
ATGCTGCGTCTGAGCGCGCTTTATCGTTACCCGTTGAAATCCGCCAAGGGCGAGGTCCTGCAAGGGATTGGCCTGGACAA
ACTGGGGCTTGAGGGCGACCGACGCTGGATGCTGGTGGACGAGGCCAGCGGACGGTTCCTGACCCAGCGTGCCGAAGCGA
AAATGAGCCAGCTCTCGGCGCTATGGAATGCCACTGGCGGCCTGACGCTCAGCGCGCCGGGGCATTCGGCAATCGATGTC
GCCTTGCCTGGCGGTGACGACGACCTGCGTGGCGTAACCATCTGGCGCGATACCTTGCGCGTACCGGATGCCGGTGAGGA
GGCGGCCCGTTGGGTCAGCGATTTCATCGGCAAACCGACGCGCCTGGTGCAAGTGCCGCTTGAACGCGCTCGTACGACTC
AGGCCGGGTACGGCAACGACGACGATCAAGTGGCGTTCGCCGACGGCTTTCCACTGTTGCTGATTGGTGAGGCATCACTG
CAACACCTGTCGCAGGAAGTCGGGCGCCCTCTGGAAATGCTGCGGTTCCGGCCGAATCTGGTGATCGAAGGCAGTGATGC
TTACGCCGAGGATGGCTGGAAGCGGATTCGGATCGGCGATGTCGAGTTCCGCGTGGTCAAGTCCTGCTCGCGGTGCATTC
TCACCACGATCGATCCGCAGACCGGTGAGCGCAGCGCTGACCGCGAGCCGCTGGCAACCTTACAGAAGACCCGCGCCCAG
GCCGACGGCGCGATGTTTGGCCAGAACCTGGTCAATGACAGCAATGGCCGGCTTGAAATCGGCATGCCGGTGGAAATCCT
CGAATAA

Upstream 100 bases:

>100_bases
ACCGGCCTGATCAACCTGTCGAGGCTGACCTCGCGTCAGCCTTTGATTCGCTGACAAAGCTCGTATAGGGTGGCGTTTTT
GACCCACCAGGGAGCTGGCC

Downstream 100 bases:

>100_bases
CCGCTCCTGAAACGAAAAATGCCCGTGTCCTTGGACACGGGCATTTTTCATGACCGCAGGAAACCGGGGTTTCAGCCGCG
GTATTCGCACAGGTAGGCGG

Product: MOSC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MLRLSALYRYPLKSAKGEVLQGIGLDKLGLEGDRRWMLVDEASGRFLTQRAEAKMSQLSALWNATGGLTLSAPGHSAIDV
ALPGGDDDLRGVTIWRDTLRVPDAGEEAARWVSDFIGKPTRLVQVPLERARTTQAGYGNDDDQVAFADGFPLLLIGEASL
QHLSQEVGRPLEMLRFRPNLVIEGSDAYAEDGWKRIRIGDVEFRVVKSCSRCILTTIDPQTGERSADREPLATLQKTRAQ
ADGAMFGQNLVNDSNGRLEIGMPVEILE

Sequences:

>Translated_268_residues
MLRLSALYRYPLKSAKGEVLQGIGLDKLGLEGDRRWMLVDEASGRFLTQRAEAKMSQLSALWNATGGLTLSAPGHSAIDV
ALPGGDDDLRGVTIWRDTLRVPDAGEEAARWVSDFIGKPTRLVQVPLERARTTQAGYGNDDDQVAFADGFPLLLIGEASL
QHLSQEVGRPLEMLRFRPNLVIEGSDAYAEDGWKRIRIGDVEFRVVKSCSRCILTTIDPQTGERSADREPLATLQKTRAQ
ADGAMFGQNLVNDSNGRLEIGMPVEILE
>Mature_268_residues
MLRLSALYRYPLKSAKGEVLQGIGLDKLGLEGDRRWMLVDEASGRFLTQRAEAKMSQLSALWNATGGLTLSAPGHSAIDV
ALPGGDDDLRGVTIWRDTLRVPDAGEEAARWVSDFIGKPTRLVQVPLERARTTQAGYGNDDDQVAFADGFPLLLIGEASL
QHLSQEVGRPLEMLRFRPNLVIEGSDAYAEDGWKRIRIGDVEFRVVKSCSRCILTTIDPQTGERSADREPLATLQKTRAQ
ADGAMFGQNLVNDSNGRLEIGMPVEILE

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=284, Percent_Identity=35.2112676056338, Blast_Score=147, Evalue=8e-36,
Organism=Homo sapiens, GI31542713, Length=281, Percent_Identity=32.7402135231317, Blast_Score=128, Evalue=4e-30,
Organism=Homo sapiens, GI157388923, Length=242, Percent_Identity=27.2727272727273, Blast_Score=101, Evalue=5e-22,
Organism=Escherichia coli, GI1787179, Length=269, Percent_Identity=37.546468401487, Blast_Score=153, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17561286, Length=261, Percent_Identity=32.5670498084291, Blast_Score=134, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI71990971, Length=267, Percent_Identity=32.5842696629214, Blast_Score=130, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI17540702, Length=288, Percent_Identity=30.5555555555556, Blast_Score=121, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI25147498, Length=224, Percent_Identity=25.4464285714286, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI45550400, Length=255, Percent_Identity=28.2352941176471, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI17647607, Length=240, Percent_Identity=29.1666666666667, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 29419; Mature: 29419

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLSALYRYPLKSAKGEVLQGIGLDKLGLEGDRRWMLVDEASGRFLTQRAEAKMSQLSA
CEEHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
LWNATGGLTLSAPGHSAIDVALPGGDDDLRGVTIWRDTLRVPDAGEEAARWVSDFIGKPT
HHCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCE
RLVQVPLERARTTQAGYGNDDDQVAFADGFPLLLIGEASLQHLSQEVGRPLEMLRFRPNL
EEEECCHHHHHCCCCCCCCCCCCEEEECCCCEEEECHHHHHHHHHHHCCHHHHHHCCCCE
VIEGSDAYAEDGWKRIRIGDVEFRVVKSCSRCILTTIDPQTGERSADREPLATLQKTRAQ
EEECCCCCCCCCCEEEEECCCHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHH
ADGAMFGQNLVNDSNGRLEIGMPVEILE
HCHHHHHHHHCCCCCCEEEECCCCEECC
>Mature Secondary Structure
MLRLSALYRYPLKSAKGEVLQGIGLDKLGLEGDRRWMLVDEASGRFLTQRAEAKMSQLSA
CEEHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
LWNATGGLTLSAPGHSAIDVALPGGDDDLRGVTIWRDTLRVPDAGEEAARWVSDFIGKPT
HHCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCE
RLVQVPLERARTTQAGYGNDDDQVAFADGFPLLLIGEASLQHLSQEVGRPLEMLRFRPNL
EEEECCHHHHHCCCCCCCCCCCCEEEECCCCEEEECHHHHHHHHHHHCCHHHHHHCCCCE
VIEGSDAYAEDGWKRIRIGDVEFRVVKSCSRCILTTIDPQTGERSADREPLATLQKTRAQ
EEECCCCCCCCCCEEEEECCCHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHH
ADGAMFGQNLVNDSNGRLEIGMPVEILE
HCHHHHHHHHCCCCCCEEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]