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The map label for this gene is kstR2 [H]

Identifier: 77460165

GI number: 77460165

Start: 4470367

End: 4471014

Strand: Reverse

Name: kstR2 [H]

Synonym: Pfl01_3944

Alternate gene names: 77460165

Gene position: 4471014-4470367 (Counterclockwise)

Preceding gene: 77460174

Following gene: 77460164

Centisome position: 69.44

GC content: 61.88

Gene sequence:

>648_bases
ATGATCGACTGTAGGAGACAATGGGTGGATGAGCAAAAAGCCCTGAGGGTCATGCGTGAACTGGTCGATGCCGGCCAGCT
GACCGATCCGGACAGCGCTCGCGGCAAACTGCTGCAAGTGGCGGCCCACCTGTTTCGCAACAAGGGCTACGAGCGCACCA
CGGTGCGCGATCTGGCCGGTGCCGTGGGGATTCAGTCCGGCAGCATCTTTCATCACTTCAAGAGCAAGGATGAAATCCTG
CGCGCAGTGATGGAGGAAACCATCCGCTACAACACCGCGCTGATGCGCGCAGCCCTTGCCGAAGCCGCCGATGTGCGTGA
GCGGGTGCTGGCGCTGATCCGCTGCGAATTGCAGTCGATCATGGGCGGCAGCGGCGAAGCGATGGCGGTGTTGGTGTATG
AGTGGCGCTCGCTGTCCGAAGATGGCCAGGCCAAAGTGCTGGCGCTGCGAGACATTTATGAAGACCTCTGGCTGCAAGTG
CTGGGCGAGGCCAAGGAGGCGGGGTTCATCCGTGGCGACGTGTTCATTACCCGACGTTTTCTCACGGGGGCGCTGTCCTG
GACCACCACCTGGTTCCGTGCCGGCGGCAGTCTGAGCCTGGATCAACTGGCCGAAGAGGCGCTGATTCTGGTGCTCGAAG
AGCGCTAG

Upstream 100 bases:

>100_bases
CACCTGAAGTTTTCTTCTGCCCAAGCGCTTGCTTGGTCGCGGGTGGCGGCTTAAATTGCCCGCGCAACCCCGCCGTTTCT
GCGGCGTACGGCACACTTGA

Downstream 100 bases:

>100_bases
GCGCTTTCTATCGGGCCGGGAAACTGGCTAACTTGGCGAAACCGCCTAGCTTGAATGCATGATCGGTACTTTTTCGGGGA
GTGGGGTGTTTTGAAGTCTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MIDCRRQWVDEQKALRVMRELVDAGQLTDPDSARGKLLQVAAHLFRNKGYERTTVRDLAGAVGIQSGSIFHHFKSKDEIL
RAVMEETIRYNTALMRAALAEAADVRERVLALIRCELQSIMGGSGEAMAVLVYEWRSLSEDGQAKVLALRDIYEDLWLQV
LGEAKEAGFIRGDVFITRRFLTGALSWTTTWFRAGGSLSLDQLAEEALILVLEER

Sequences:

>Translated_215_residues
MIDCRRQWVDEQKALRVMRELVDAGQLTDPDSARGKLLQVAAHLFRNKGYERTTVRDLAGAVGIQSGSIFHHFKSKDEIL
RAVMEETIRYNTALMRAALAEAADVRERVLALIRCELQSIMGGSGEAMAVLVYEWRSLSEDGQAKVLALRDIYEDLWLQV
LGEAKEAGFIRGDVFITRRFLTGALSWTTTWFRAGGSLSLDQLAEEALILVLEER
>Mature_215_residues
MIDCRRQWVDEQKALRVMRELVDAGQLTDPDSARGKLLQVAAHLFRNKGYERTTVRDLAGAVGIQSGSIFHHFKSKDEIL
RAVMEETIRYNTALMRAALAEAADVRERVLALIRCELQSIMGGSGEAMAVLVYEWRSLSEDGQAKVLALRDIYEDLWLQV
LGEAKEAGFIRGDVFITRRFLTGALSWTTTWFRAGGSLSLDQLAEEALILVLEER

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24201; Mature: 24201

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDCRRQWVDEQKALRVMRELVDAGQLTDPDSARGKLLQVAAHLFRNKGYERTTVRDLAG
CCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AVGIQSGSIFHHFKSKDEILRAVMEETIRYNTALMRAALAEAADVRERVLALIRCELQSI
HHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGGSGEAMAVLVYEWRSLSEDGQAKVLALRDIYEDLWLQVLGEAKEAGFIRGDVFITRRF
HCCCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHH
LTGALSWTTTWFRAGGSLSLDQLAEEALILVLEER
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECC
>Mature Secondary Structure
MIDCRRQWVDEQKALRVMRELVDAGQLTDPDSARGKLLQVAAHLFRNKGYERTTVRDLAG
CCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AVGIQSGSIFHHFKSKDEILRAVMEETIRYNTALMRAALAEAADVRERVLALIRCELQSI
HHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGGSGEAMAVLVYEWRSLSEDGQAKVLALRDIYEDLWLQVLGEAKEAGFIRGDVFITRRF
HCCCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHH
LTGALSWTTTWFRAGGSLSLDQLAEEALILVLEER
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA