| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460147
Identifier: 77460147
GI number: 77460147
Start: 4441277
End: 4441843
Strand: Direct
Name: 77460147
Synonym: Pfl01_3926
Alternate gene names: NA
Gene position: 4441277-4441843 (Clockwise)
Preceding gene: 77460146
Following gene: 77460148
Centisome position: 68.98
GC content: 63.49
Gene sequence:
>567_bases ATGACCACGCCGACCACCCAGGTTGTACGCCCGGCAGGTGCCGGGCACGAAACCCTCAATGTGCTGCTGATGTGCCTGCT GATCCTTGCGGTTGCCGGTTCCGTGGTCGCATGGCGCGGTGTATCCCACGAACCGGAGCCGGTTTCCAGCCATCAACTGG ACGCCCGTCGCGACCTTGGCGCCAGCGAGCAAGGCATCTATGCCGACTTGCGGGTGACCCTCGACGAGATCCACCTGTTG CGCGAAGAACAGCAAGCGTTGCCCACACCACAGAATCTGGCTGATGAAGGCTTCGCCCCGTTTGCCCAGGACGCCAGTTC GGTCAGTCGTGGCGGTCACGTCTGGCAATTGCTGGCGGACAGTGCCTACTTCGGCCAGAGCCAGGTCCCGACCGTGGCCG GTTCGTTTCTGATGCGCCTGAACAACGCCGGGCCGGACATCTGGCTCAACCGCGCCACCGATCTGCAAGCGCCGACAGAC CTGTCCGATGCAGCGCTAAGCGCTGCCGGCTGGAAACAGATCGTCGCGCAATTCGATGCCGGGGTGACCCGCGAACATCG TCATTGA
Upstream 100 bases:
>100_bases CGACCCTGACCTTCAAGAAACCCGGCGCCGAGTTTTATGTGCTGTTCGACGCAGGCCCCGGCCATGTGGTCGAAATCGAC CAAGCGGATATCGAAGCCCC
Downstream 100 bases:
>100_bases ACCCTCGCCTTCATTCGAGAGAAGACCGCTTGCCCATGCCTAGTTCATCTCAACGCCGTCCTTTCCTGCGCCTGCTGCTG ATCGGCCTGTGCGCCAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MTTPTTQVVRPAGAGHETLNVLLMCLLILAVAGSVVAWRGVSHEPEPVSSHQLDARRDLGASEQGIYADLRVTLDEIHLL REEQQALPTPQNLADEGFAPFAQDASSVSRGGHVWQLLADSAYFGQSQVPTVAGSFLMRLNNAGPDIWLNRATDLQAPTD LSDAALSAAGWKQIVAQFDAGVTREHRH
Sequences:
>Translated_188_residues MTTPTTQVVRPAGAGHETLNVLLMCLLILAVAGSVVAWRGVSHEPEPVSSHQLDARRDLGASEQGIYADLRVTLDEIHLL REEQQALPTPQNLADEGFAPFAQDASSVSRGGHVWQLLADSAYFGQSQVPTVAGSFLMRLNNAGPDIWLNRATDLQAPTD LSDAALSAAGWKQIVAQFDAGVTREHRH >Mature_187_residues TTPTTQVVRPAGAGHETLNVLLMCLLILAVAGSVVAWRGVSHEPEPVSSHQLDARRDLGASEQGIYADLRVTLDEIHLLR EEQQALPTPQNLADEGFAPFAQDASSVSRGGHVWQLLADSAYFGQSQVPTVAGSFLMRLNNAGPDIWLNRATDLQAPTDL SDAALSAAGWKQIVAQFDAGVTREHRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20241; Mature: 20110
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPTTQVVRPAGAGHETLNVLLMCLLILAVAGSVVAWRGVSHEPEPVSSHQLDARRDLG CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC ASEQGIYADLRVTLDEIHLLREEQQALPTPQNLADEGFAPFAQDASSVSRGGHVWQLLAD CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH SAYFGQSQVPTVAGSFLMRLNNAGPDIWLNRATDLQAPTDLSDAALSAAGWKQIVAQFDA HHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GVTREHRH CCCCCCCC >Mature Secondary Structure TTPTTQVVRPAGAGHETLNVLLMCLLILAVAGSVVAWRGVSHEPEPVSSHQLDARRDLG CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC ASEQGIYADLRVTLDEIHLLREEQQALPTPQNLADEGFAPFAQDASSVSRGGHVWQLLAD CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH SAYFGQSQVPTVAGSFLMRLNNAGPDIWLNRATDLQAPTDLSDAALSAAGWKQIVAQFDA HHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GVTREHRH CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA