Click here to switch to the map view.

The map label for this gene is selD [H]

Identifier: 77459977

GI number: 77459977

Start: 4243347

End: 4244381

Strand: Reverse

Name: selD [H]

Synonym: Pfl01_3755

Alternate gene names: 77459977

Gene position: 4244381-4243347 (Counterclockwise)

Preceding gene: 77459978

Following gene: 77459976

Centisome position: 65.92

GC content: 63.77

Gene sequence:

>1035_bases
ATGACCGAGCCCATCCGTCTGACCCAATACAGCCACGGCGCCGGCTGTGGCTGCAAGATTTCGCCCAAGGTGCTGGAGGT
GATTCTGGCCGGCAGCGGGGCGCAGAATCTTGATCCGAAACTGTGGGTCGGCAACGCGTCGCGCGATGACGCGGCGGTGT
ATGAAATCGATGCCGAGCGCGGGGTGGTCTCGACCACGGATTTTTTCATGCCGATCGTTGATGACCCGTTCGACTTCGGC
CGGATTGCCGCCACCAATGCCATCAGCGACATCTACGCCATGGGCGGCGATCCGTTGATGGCGATTGCGATCCTCGGCTG
GCCGGTCAATGTGCTGGCGCCGGAAGTGGCGCGGGACGTGATACGGGGGGGGCGAGCGGTGTGCGATGCGGCGGGGATTC
CACTGGCCGGCGGGCATTCGATCGATGCACCGGAGCCGATCTTCGGTCTGGCTGTCACCGGGCTTGTGGAAAAGCGCTTC
ATGAAACGCAACGACACGGCCACCGCCGGTTGCCTGCTGTACCTGACCAAACCATTGGGCATCGGCATCCTCACCACCGC
CGAAAAGAAGGGCAAGCTGCGCCCCGACGACATCGGCGTGGCCCGGGACTGGATGTGTACGCTGAACAAGCCCGGCAGCC
GTTTCGGCAAACTGGCCGGGGTCACCGCCATGACCGACGTCACCGGTTTCGGCCTGCTCGGGCATCTGGTAGAAATGGCC
GACGGCAGTCACCTGACGGCGCGGGTTTTCTATGACCGGGTGCCGCGTCTTTCGAGCATCGAGTATTACCTCGAACAGGG
CTGCGTGCCCGGTGGCACCTTGCGCAATTTCGACAGCTATTCGAGCCGCGTCGGGCGGGTCCAGGAATTGCACAAGCGAG
TGTTGTGCGACCCGCAGACCAGCGGCGGTCTGCTGGTGGCCGTGACGCCTGAAGGCAATGCCGAATTCCTCGCCGTCGCT
GCCGAACTCGGCCTCGCGCTTGAGCCGATCGGTGAGTTGATCGGGCGACAGAGCCACGCGGTCGAGGTGAATTGA

Upstream 100 bases:

>100_bases
ATTCAGGAGCGAAGCACTTCAGCCGCCCGCAAGGGCGGCTTTTTTTTGCCTGCCGACCCCTCTGCTAAAATCCCTTCCAC
TGCCTCCCGGAGACTGCCCC

Downstream 100 bases:

>100_bases
TGTCCATCGACGTCACCGACTACCGCGACATCTTCCTCAACGACCGGCCGCTGATGGACGCCCGTGCGCCGGTCGAGTTT
CACAAGGGCGCGTTTCCAGG

Product: selenophosphate synthetase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTEPIRLTQYSHGAGCGCKISPKVLEVILAGSGAQNLDPKLWVGNASRDDAAVYEIDAERGVVSTTDFFMPIVDDPFDFG
RIAATNAISDIYAMGGDPLMAIAILGWPVNVLAPEVARDVIRGGRAVCDAAGIPLAGGHSIDAPEPIFGLAVTGLVEKRF
MKRNDTATAGCLLYLTKPLGIGILTTAEKKGKLRPDDIGVARDWMCTLNKPGSRFGKLAGVTAMTDVTGFGLLGHLVEMA
DGSHLTARVFYDRVPRLSSIEYYLEQGCVPGGTLRNFDSYSSRVGRVQELHKRVLCDPQTSGGLLVAVTPEGNAEFLAVA
AELGLALEPIGELIGRQSHAVEVN

Sequences:

>Translated_344_residues
MTEPIRLTQYSHGAGCGCKISPKVLEVILAGSGAQNLDPKLWVGNASRDDAAVYEIDAERGVVSTTDFFMPIVDDPFDFG
RIAATNAISDIYAMGGDPLMAIAILGWPVNVLAPEVARDVIRGGRAVCDAAGIPLAGGHSIDAPEPIFGLAVTGLVEKRF
MKRNDTATAGCLLYLTKPLGIGILTTAEKKGKLRPDDIGVARDWMCTLNKPGSRFGKLAGVTAMTDVTGFGLLGHLVEMA
DGSHLTARVFYDRVPRLSSIEYYLEQGCVPGGTLRNFDSYSSRVGRVQELHKRVLCDPQTSGGLLVAVTPEGNAEFLAVA
AELGLALEPIGELIGRQSHAVEVN
>Mature_343_residues
TEPIRLTQYSHGAGCGCKISPKVLEVILAGSGAQNLDPKLWVGNASRDDAAVYEIDAERGVVSTTDFFMPIVDDPFDFGR
IAATNAISDIYAMGGDPLMAIAILGWPVNVLAPEVARDVIRGGRAVCDAAGIPLAGGHSIDAPEPIFGLAVTGLVEKRFM
KRNDTATAGCLLYLTKPLGIGILTTAEKKGKLRPDDIGVARDWMCTLNKPGSRFGKLAGVTAMTDVTGFGLLGHLVEMAD
GSHLTARVFYDRVPRLSSIEYYLEQGCVPGGTLRNFDSYSSRVGRVQELHKRVLCDPQTSGGLLVAVTPEGNAEFLAVAA
ELGLALEPIGELIGRQSHAVEVN

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=347, Percent_Identity=26.8011527377522, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI15011844, Length=357, Percent_Identity=26.3305322128852, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI1788062, Length=330, Percent_Identity=64.2424242424242, Blast_Score=434, Evalue=1e-123,
Organism=Caenorhabditis elegans, GI17543426, Length=349, Percent_Identity=26.647564469914, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24653602, Length=345, Percent_Identity=27.2463768115942, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24653604, Length=345, Percent_Identity=27.2463768115942, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI28574119, Length=340, Percent_Identity=27.3529411764706, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI28574118, Length=272, Percent_Identity=30.1470588235294, Blast_Score=85, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 36508; Mature: 36377

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPIRLTQYSHGAGCGCKISPKVLEVILAGSGAQNLDPKLWVGNASRDDAAVYEIDAER
CCCCEEEEEECCCCCCCCEECHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEECCC
GVVSTTDFFMPIVDDPFDFGRIAATNAISDIYAMGGDPLMAIAILGWPVNVLAPEVARDV
CEEECHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCHHHHHHH
IRGGRAVCDAAGIPLAGGHSIDAPEPIFGLAVTGLVEKRFMKRNDTATAGCLLYLTKPLG
HHCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCC
IGILTTAEKKGKLRPDDIGVARDWMCTLNKPGSRFGKLAGVTAMTDVTGFGLLGHLVEMA
CEEEEECHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHC
DGSHLTARVFYDRVPRLSSIEYYLEQGCVPGGTLRNFDSYSSRVGRVQELHKRVLCDPQT
CCCCEEEEEHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
SGGLLVAVTPEGNAEFLAVAAELGLALEPIGELIGRQSHAVEVN
CCCEEEEECCCCCCCEEEEHHHHCCHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure 
TEPIRLTQYSHGAGCGCKISPKVLEVILAGSGAQNLDPKLWVGNASRDDAAVYEIDAER
CCCEEEEEECCCCCCCCEECHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEECCC
GVVSTTDFFMPIVDDPFDFGRIAATNAISDIYAMGGDPLMAIAILGWPVNVLAPEVARDV
CEEECHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCHHHHHHH
IRGGRAVCDAAGIPLAGGHSIDAPEPIFGLAVTGLVEKRFMKRNDTATAGCLLYLTKPLG
HHCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCC
IGILTTAEKKGKLRPDDIGVARDWMCTLNKPGSRFGKLAGVTAMTDVTGFGLLGHLVEMA
CEEEEECHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHC
DGSHLTARVFYDRVPRLSSIEYYLEQGCVPGGTLRNFDSYSSRVGRVQELHKRVLCDPQT
CCCCEEEEEHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
SGGLLVAVTPEGNAEFLAVAAELGLALEPIGELIGRQSHAVEVN
CCCEEEEECCCCCCCEEEEHHHHCCHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]