| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459949
Identifier: 77459949
GI number: 77459949
Start: 4213133
End: 4213699
Strand: Reverse
Name: 77459949
Synonym: Pfl01_3727
Alternate gene names: NA
Gene position: 4213699-4213133 (Counterclockwise)
Preceding gene: 77459951
Following gene: 77459946
Centisome position: 65.45
GC content: 60.49
Gene sequence:
>567_bases ATGCTCATCAGGTCACTGACCCTGACACTCTTGCTGGCGATTGCCGGCCCCCTGTTCGCCGCCGACGGCGATTCCCCTCT GGACGTCGACAAGGGCATCAACCGCCCGGTGATCGTGATCGCTTCCAGTACGGTCGATTCTTATTGGGTCAGCCTGAAAA AAGCGCTGGACGACCCGGCCAACAAACAAGGCATCGCCGACCGCAAGATCAAGGTTTACACCATCCTGAGCATGAGCGGT CAGGTCGATGGCAAAAGCCTCGAGCAGCAGCAAACCATGGCGCTGCTGCGCTCGCTGAAGCTGGGCGCCGGGGCGTATCC GAAAGTCTTCCTGGTGGGCAAGGATGGCGAGACCAAACTGACGGCTTCGGGGGATGAAGCGGCGGCGGTCGATCTGAAGA AAATCTTCGACACGATTGATGCGTTGCCTGCCGCTGAAAAAGAAGCCACTTCCACCGTGGTGACGGCGCCGGCTGCTGCA GAACCTACCCCGGCCAAGGGTGCGAAAGGCACGAAACCGGCGAAGCCAGCCAAACCGGCCAAGCCGCCGGAAATGCCGGA TGATTGA
Upstream 100 bases:
>100_bases CCTAAGCTTTGGGCAAGGCGAAACACTTTTGCCGGGCAGCCCCCGGAACAATCGCCGCGATGCGCAATCATTAGAGCGTG GATATCAAAAGGAGATGCGC
Downstream 100 bases:
>100_bases TTGAGGCAGGCTCTGAATAAAAATGGCGAACGTGGTTAAACGTTCGCCATTTTTTGCTCAATGGAGCGGAATCAATTAAA GAAGTTGGCGGATTACGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MLIRSLTLTLLLAIAGPLFAADGDSPLDVDKGINRPVIVIASSTVDSYWVSLKKALDDPANKQGIADRKIKVYTILSMSG QVDGKSLEQQQTMALLRSLKLGAGAYPKVFLVGKDGETKLTASGDEAAAVDLKKIFDTIDALPAAEKEATSTVVTAPAAA EPTPAKGAKGTKPAKPAKPAKPPEMPDD
Sequences:
>Translated_188_residues MLIRSLTLTLLLAIAGPLFAADGDSPLDVDKGINRPVIVIASSTVDSYWVSLKKALDDPANKQGIADRKIKVYTILSMSG QVDGKSLEQQQTMALLRSLKLGAGAYPKVFLVGKDGETKLTASGDEAAAVDLKKIFDTIDALPAAEKEATSTVVTAPAAA EPTPAKGAKGTKPAKPAKPAKPPEMPDD >Mature_188_residues MLIRSLTLTLLLAIAGPLFAADGDSPLDVDKGINRPVIVIASSTVDSYWVSLKKALDDPANKQGIADRKIKVYTILSMSG QVDGKSLEQQQTMALLRSLKLGAGAYPKVFLVGKDGETKLTASGDEAAAVDLKKIFDTIDALPAAEKEATSTVVTAPAAA EPTPAKGAKGTKPAKPAKPAKPPEMPDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19595; Mature: 19595
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIRSLTLTLLLAIAGPLFAADGDSPLDVDKGINRPVIVIASSTVDSYWVSLKKALDDPA CCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCC NKQGIADRKIKVYTILSMSGQVDGKSLEQQQTMALLRSLKLGAGAYPKVFLVGKDGETKL CCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE TASGDEAAAVDLKKIFDTIDALPAAEKEATSTVVTAPAAAEPTPAKGAKGTKPAKPAKPA EECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC KPPEMPDD CCCCCCCC >Mature Secondary Structure MLIRSLTLTLLLAIAGPLFAADGDSPLDVDKGINRPVIVIASSTVDSYWVSLKKALDDPA CCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCC NKQGIADRKIKVYTILSMSGQVDGKSLEQQQTMALLRSLKLGAGAYPKVFLVGKDGETKL CCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE TASGDEAAAVDLKKIFDTIDALPAAEKEATSTVVTAPAAAEPTPAKGAKGTKPAKPAKPA EECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC KPPEMPDD CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA