| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459739
Identifier: 77459739
GI number: 77459739
Start: 3997074
End: 3998012
Strand: Reverse
Name: 77459739
Synonym: Pfl01_3517
Alternate gene names: NA
Gene position: 3998012-3997074 (Counterclockwise)
Preceding gene: 77459740
Following gene: 77459738
Centisome position: 62.1
GC content: 64.22
Gene sequence:
>939_bases ATGAATAGATCCTCTGATGGGTTTTATCCTGCCTACGAAGGAGAGTCGAGCAACGTCTCGGGGGTGTCCTGGGGCGCGAT CTTCGCAGGGGCTGCCGCTGCGGCGGCACTGTCGCTGATTCTCGTGCTGCTGGGCTTCGGTCTGGGCTTCTCCGCCGTAT CACCGTGGGCCGGGGAGGGTATCAGCGCCAAGGGGCTGGGCATTTCCACCATCATCTGGCTGGCGGCCACGCAAATCATC GCTTCGGGGCTCGGTGGCTACATCGCTGGTCGCTTGCGAGTGAAGTGGGCCAACATGCACGGTGACGAGGTTTATTTCCG CGACACCGCCCATGGCTTCCTGTCCTGGTGTGTAGCGACTCTGGTCACCGCAACGCTGGTGGTCGGCTCGGTCAGCAGCA TCGTCAGCGGTGGCGTGCAGGCCGGTGCAAGTGTCGCCGGTGGCGCAGCCAGTGCGATGACTCAGGCGGCGGGTACTGCC GCGGCCAACACCGACAGTGATCAGTACGGCTACTTCGTCGACAGCCTGTTTCGCGACGATCGTCCCGCCGCCGTCAGCGA TGACGCCGCCCGTGGCACCGTGACCCGGATCTTCGCCCAGAGCCTGGCCAACGGTCAGCTCAGCGCCGAAGACCGTACCT ACCTCGCACAACTGGTCGCTCAGCGTACCAACCTGACCCAGGCCGACGCCGAACGTCGGGTCGATGAAATCTACGCCCGC ACCCAGAAGGCAATCGCCGACGCCAAAGTGAAAGCGCAACAAGCCGCCGACACCGCCGCCAAAGTCGCTGCCTGGACCAC GCTGTGGATGTTCATCGCATTGTTGGCCGGTGCGTTCTTCGCCAGCCTCTCGGCCACCTTCGGCGGTCGCCGCCGGGATG CGGTCGAGTACGTCGAAGTCGAAACCTACACCACGACCACGCTGCCGCCAGTCCGTTAA
Upstream 100 bases:
>100_bases AATCCAAACGATTTATTTAGTGTCGGCGACTGGCACGGTCACTGCAATTCCTCTGATGACGAGTTGTAACACCATTTTTC ATGCCTGGAGCACTACAACA
Downstream 100 bases:
>100_bases TCAAGGAGAATCACCATGCGCTCACTACTGCTGTTTTTCCTCGGCGTTCCAATCCCGATCATCATCCTGATCGCCCTGTT CGTGCACTGATTCCTTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MNRSSDGFYPAYEGESSNVSGVSWGAIFAGAAAAAALSLILVLLGFGLGFSAVSPWAGEGISAKGLGISTIIWLAATQII ASGLGGYIAGRLRVKWANMHGDEVYFRDTAHGFLSWCVATLVTATLVVGSVSSIVSGGVQAGASVAGGAASAMTQAAGTA AANTDSDQYGYFVDSLFRDDRPAAVSDDAARGTVTRIFAQSLANGQLSAEDRTYLAQLVAQRTNLTQADAERRVDEIYAR TQKAIADAKVKAQQAADTAAKVAAWTTLWMFIALLAGAFFASLSATFGGRRRDAVEYVEVETYTTTTLPPVR
Sequences:
>Translated_312_residues MNRSSDGFYPAYEGESSNVSGVSWGAIFAGAAAAAALSLILVLLGFGLGFSAVSPWAGEGISAKGLGISTIIWLAATQII ASGLGGYIAGRLRVKWANMHGDEVYFRDTAHGFLSWCVATLVTATLVVGSVSSIVSGGVQAGASVAGGAASAMTQAAGTA AANTDSDQYGYFVDSLFRDDRPAAVSDDAARGTVTRIFAQSLANGQLSAEDRTYLAQLVAQRTNLTQADAERRVDEIYAR TQKAIADAKVKAQQAADTAAKVAAWTTLWMFIALLAGAFFASLSATFGGRRRDAVEYVEVETYTTTTLPPVR >Mature_312_residues MNRSSDGFYPAYEGESSNVSGVSWGAIFAGAAAAAALSLILVLLGFGLGFSAVSPWAGEGISAKGLGISTIIWLAATQII ASGLGGYIAGRLRVKWANMHGDEVYFRDTAHGFLSWCVATLVTATLVVGSVSSIVSGGVQAGASVAGGAASAMTQAAGTA AANTDSDQYGYFVDSLFRDDRPAAVSDDAARGTVTRIFAQSLANGQLSAEDRTYLAQLVAQRTNLTQADAERRVDEIYAR TQKAIADAKVKAQQAADTAAKVAAWTTLWMFIALLAGAFFASLSATFGGRRRDAVEYVEVETYTTTTLPPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32465; Mature: 32465
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSSDGFYPAYEGESSNVSGVSWGAIFAGAAAAAALSLILVLLGFGLGFSAVSPWAGEG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC ISAKGLGISTIIWLAATQIIASGLGGYIAGRLRVKWANMHGDEVYFRDTAHGFLSWCVAT CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEECHHHHHHHHHHHH LVTATLVVGSVSSIVSGGVQAGASVAGGAASAMTQAAGTAAANTDSDQYGYFVDSLFRDD HHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC RPAAVSDDAARGTVTRIFAQSLANGQLSAEDRTYLAQLVAQRTNLTQADAERRVDEIYAR CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TQKAIADAKVKAQQAADTAAKVAAWTTLWMFIALLAGAFFASLSATFGGRRRDAVEYVEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEE ETYTTTTLPPVR EEEEECCCCCCC >Mature Secondary Structure MNRSSDGFYPAYEGESSNVSGVSWGAIFAGAAAAAALSLILVLLGFGLGFSAVSPWAGEG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC ISAKGLGISTIIWLAATQIIASGLGGYIAGRLRVKWANMHGDEVYFRDTAHGFLSWCVAT CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEECHHHHHHHHHHHH LVTATLVVGSVSSIVSGGVQAGASVAGGAASAMTQAAGTAAANTDSDQYGYFVDSLFRDD HHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC RPAAVSDDAARGTVTRIFAQSLANGQLSAEDRTYLAQLVAQRTNLTQADAERRVDEIYAR CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH TQKAIADAKVKAQQAADTAAKVAAWTTLWMFIALLAGAFFASLSATFGGRRRDAVEYVEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEE ETYTTTTLPPVR EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA